RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 PRTFDC1Q9NRG1 225 aa10.37□□□□□ -0.75
COL27A1-204ENST00000477421 ACTR10Q9NZ32 417 aa10.37□□□□□ -0.75
COL27A1-204ENST00000477421 PADI2Q9Y2J8 665 aa10.37□□□□□ -0.75
COL27A1-204ENST00000477421 SCN10AQ9Y5Y9 1956 aa10.37□□□□□ -0.75
COL27A1-204ENST00000477421 FUCA1P04066 466 aa10.37□□□□□ -0.75
COL27A1-204ENST00000477421 CD40LGP29965 261 aa10.37□□□□□ -0.75
COL27A1-204ENST00000477421 MTFR2Q6P444 385 aa10.37□□□□□ -0.75
COL27A1-204ENST00000477421 TTLL10Q6ZVT0 673 aa10.37□□□□□ -0.75
COL27A1-204ENST00000477421 NANOGNBQ7Z5D8 188 aa10.37□□□□□ -0.75
COL27A1-204ENST00000477421 OR52E2Q8NGJ4 325 aa10.37□□□□□ -0.75
COL27A1-204ENST00000477421 THEM6Q8WUY1 208 aa10.37□□□□□ -0.75
COL27A1-204ENST00000477421 HSPA12BQ96MM6 686 aa10.37□□□□□ -0.75
COL27A1-204ENST00000477421 RPP25Q9BUL9 199 aaKnown RBP10.37□□□□□ -0.75
COL27A1-204ENST00000477421 RBM38Q9H0Z9 239 aaKnown RBP10.37□□□□□ -0.75
COL27A1-204ENST00000477421 MED28Q9H204 178 aa10.37□□□□□ -0.75
COL27A1-204ENST00000477421 NDRG4Q9ULP0 352 aaKnown RBP10.37□□□□□ -0.75
COL27A1-204ENST00000477421 STUB1Q9UNE7 303 aa10.37□□□□□ -0.75
COL27A1-204ENST00000477421 NTNG1Q9Y2I2 539 aa10.37□□□□□ -0.75
COL27A1-204ENST00000477421 HCRTR2O43614 444 aa10.36□□□□□ -0.75
COL27A1-204ENST00000477421 NAT1P18440 290 aa10.36□□□□□ -0.75
COL27A1-204ENST00000477421 GBX2P52951 348 aaPredicted RBP10.36□□□□□ -0.75
COL27A1-204ENST00000477421 WNT3P56703 355 aa10.36□□□□□ -0.75
COL27A1-204ENST00000477421 GFOD2Q3B7J2 385 aa10.36□□□□□ -0.75
COL27A1-204ENST00000477421 TBRG1Q3YBR2 411 aa10.36□□□□□ -0.75
COL27A1-204ENST00000477421 OR9A4Q8NGU2 314 aa10.36□□□□□ -0.75
COL27A1-204ENST00000477421 C1orf216Q8TAB5 229 aa10.36□□□□□ -0.75
COL27A1-204ENST00000477421 CREB3L4Q8TEY5 395 aa10.36□□□□□ -0.75
COL27A1-204ENST00000477421 COQ10AQ96MF6 247 aa10.36□□□□□ -0.75
COL27A1-204ENST00000477421 PBX4Q9BYU1 374 aa10.36□□□□□ -0.75
COL27A1-204ENST00000477421 TCF7L1Q9HCS4 588 aa10.36□□□□□ -0.75
COL27A1-204ENST00000477421 C1GALT1Q9NS00 363 aa10.36□□□□□ -0.75
COL27A1-204ENST00000477421 TBC1D29Q9UFV1 150 aa10.36□□□□□ -0.75
COL27A1-204ENST00000477421 NAALAD2Q9Y3Q0 740 aa10.36□□□□□ -0.75
COL27A1-204ENST00000477421 TRAV27A0A087WT01 109 aa10.36□□□□□ -0.75
COL27A1-204ENST00000477421 AGAP5A6NIR3 686 aa10.36□□□□□ -0.75
COL27A1-204ENST00000477421 KIAA0355O15063 1070 aa10.36□□□□□ -0.75
COL27A1-204ENST00000477421 NR4A2P43354 598 aa10.36□□□□□ -0.75
COL27A1-204ENST00000477421 EIF2B5Q13144 721 aaKnown RBP10.36□□□□□ -0.75
COL27A1-204ENST00000477421 CACNA1EQ15878 2313 aa10.36□□□□□ -0.75
COL27A1-204ENST00000477421 ENTPD8Q5MY95 495 aa10.36□□□□□ -0.75
COL27A1-204ENST00000477421 ANKRD54Q6NXT1 300 aa10.36□□□□□ -0.75
COL27A1-204ENST00000477421 SHISA6Q6ZSJ9 500 aa10.36□□□□□ -0.75
COL27A1-204ENST00000477421 LNX2Q8N448 690 aa10.36□□□□□ -0.75
COL27A1-204ENST00000477421 AMER3Q8N944 861 aa10.36□□□□□ -0.75
COL27A1-204ENST00000477421 FAM83FQ8NEG4 500 aaPredicted RBP10.36□□□□□ -0.75
COL27A1-204ENST00000477421 ZMYND19Q96E35 227 aaPredicted RBP10.36□□□□□ -0.75
COL27A1-204ENST00000477421 TRIM2Q9C040 744 aa10.36□□□□□ -0.75
COL27A1-204ENST00000477421 MMP28Q9H239 520 aa10.36□□□□□ -0.75
COL27A1-204ENST00000477421 CENPMQ9NSP4 180 aa10.36□□□□□ -0.75
COL27A1-204ENST00000477421 CCDC88CQ9P219 2028 aa10.36□□□□□ -0.75
COL27A1-204ENST00000477421 NLKQ9UBE8 527 aa10.36□□□□□ -0.75
COL27A1-204ENST00000477421 CCL27Q9Y4X3 112 aa10.36□□□□□ -0.75
COL27A1-204ENST00000477421 TPRP12270 2363 aaKnown RBP10.36□□□□□ -0.75
COL27A1-204ENST00000477421 IGLV3-16A0A075B6K0 115 aa10.36□□□□□ -0.75
COL27A1-204ENST00000477421 UNC119BA6NIH7 251 aa10.36□□□□□ -0.75
COL27A1-204ENST00000477421 DLGAP1O14490 977 aa10.36□□□□□ -0.75
COL27A1-204ENST00000477421 ORC5O43913 435 aa10.36□□□□□ -0.75
COL27A1-204ENST00000477421 FCMRO60667 390 aa10.36□□□□□ -0.75
COL27A1-204ENST00000477421 PRSS23O95084 383 aa10.36□□□□□ -0.75
COL27A1-204ENST00000477421 GABARAPO95166 117 aa10.36□□□□□ -0.75
COL27A1-204ENST00000477421 ELAVL4P26378 380 aaKnown RBP10.36□□□□□ -0.75
COL27A1-204ENST00000477421 TNFSF8P32971 234 aa10.36□□□□□ -0.75
COL27A1-204ENST00000477421 CD97P48960 835 aa10.36□□□□□ -0.75
COL27A1-204ENST00000477421 SLC44A3Q8N4M1 653 aa10.36□□□□□ -0.75
COL27A1-204ENST00000477421 SMPDL3BQ92485 455 aa10.36□□□□□ -0.75
COL27A1-204ENST00000477421 RIT1Q92963 219 aa10.36□□□□□ -0.75
COL27A1-204ENST00000477421 NEURL3Q96EH8 262 aa10.36□□□□□ -0.75
COL27A1-204ENST00000477421 ADAD1Q96M93 576 aaKnown RBP10.36□□□□□ -0.75
COL27A1-204ENST00000477421 OR6C2Q9NZP2 312 aa10.36□□□□□ -0.75
COL27A1-204ENST00000477421 THAP10Q9P2Z0 257 aaPredicted RBP10.36□□□□□ -0.75
COL27A1-204ENST00000477421 A0A1W2PR48 441 aa10.35□□□□□ -0.75
COL27A1-204ENST00000477421 LRIT2A6NDA9 550 aa10.35□□□□□ -0.75
COL27A1-204ENST00000477421 UPK1AO00322 258 aa10.35□□□□□ -0.75
COL27A1-204ENST00000477421 SCDO00767 359 aa10.35□□□□□ -0.75
COL27A1-204ENST00000477421 HOXC11O43248 304 aaPredicted RBP10.35□□□□□ -0.75
COL27A1-204ENST00000477421 PRKNO60260 465 aaPredicted RBP10.35□□□□□ -0.75
COL27A1-204ENST00000477421 PPP1R3DO95685 299 aa10.35□□□□□ -0.75
COL27A1-204ENST00000477421 MT-ND5P03915 603 aa10.35□□□□□ -0.75
COL27A1-204ENST00000477421 CXCR1P25024 350 aa10.35□□□□□ -0.75
COL27A1-204ENST00000477421 MNDAP41218 407 aa10.35□□□□□ -0.75
COL27A1-204ENST00000477421 EIF1AXP47813 144 aaKnown RBP10.35□□□□□ -0.75
COL27A1-204ENST00000477421 WNT4P56705 351 aa10.35□□□□□ -0.75
COL27A1-204ENST00000477421 TMEM44Q2T9K0 475 aa10.35□□□□□ -0.75
COL27A1-204ENST00000477421 BCL7AQ4VC05 210 aa10.35□□□□□ -0.75
COL27A1-204ENST00000477421 C9orf50Q5SZB4 431 aa10.35□□□□□ -0.75
COL27A1-204ENST00000477421 C1orf189Q5VU69 101 aa10.35□□□□□ -0.75
COL27A1-204ENST00000477421 PRR22Q8IZ63 422 aa10.35□□□□□ -0.75
COL27A1-204ENST00000477421 PARP16Q8N5Y8 322 aa10.35□□□□□ -0.75
COL27A1-204ENST00000477421 MEIOBQ8N635 442 aa10.35□□□□□ -0.75
COL27A1-204ENST00000477421 ANKRD53Q8N9V6 530 aa10.35□□□□□ -0.75
COL27A1-204ENST00000477421 MOAP1Q96BY2 351 aa10.35□□□□□ -0.75
COL27A1-204ENST00000477421 CDADC1Q9BWV3 514 aa10.35□□□□□ -0.75
COL27A1-204ENST00000477421 OR52A5Q9H2C5 316 aa10.35□□□□□ -0.75
COL27A1-204ENST00000477421 DUSP21Q9H596 190 aa10.35□□□□□ -0.75
COL27A1-204ENST00000477421 ENAMQ9NRM1 1142 aa10.35□□□□□ -0.75
COL27A1-204ENST00000477421 COPS7AQ9UBW8 275 aa10.35□□□□□ -0.75
COL27A1-204ENST00000477421 EXOSC1Q9Y3B2 195 aaKnown RBP10.35□□□□□ -0.75
COL27A1-204ENST00000477421 GMEB1Q9Y692 573 aa10.35□□□□□ -0.75
COL27A1-204ENST00000477421 TNS1Q9HBL0 1735 aaKnown RBP10.35□□□□□ -0.75
COL27A1-204ENST00000477421 SMAD9O15198 467 aaKnown RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms