RNA–Protein interactions for RNA: ENST00000477334.1

RBM39-231, Transcript of RNA binding motif protein 39, human

TSL 2

Gene RBM39, Length 949 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-231	ENST00000477334	KLF18	A0A0U1RQI7	1052 aa		3.11	□□□□□ -1.91
RBM39-231	ENST00000477334	LGALS8	O00214	317 aa		3.11	□□□□□ -1.91
RBM39-231	ENST00000477334	MPHOSPH10	O00566	681 aa	Known RBP	3.11	□□□□□ -1.91
RBM39-231	ENST00000477334	CD86	P42081	329 aa		3.11	□□□□□ -1.91
RBM39-231	ENST00000477334	XCR1	P46094	333 aa		3.11	□□□□□ -1.91
RBM39-231	ENST00000477334	HTR5A	P47898	357 aa		3.11	□□□□□ -1.91
RBM39-231	ENST00000477334	MEOX2	P50222	304 aa		3.11	□□□□□ -1.91
RBM39-231	ENST00000477334	ATXN3	P54252	364 aa	Predicted RBP	3.11	□□□□□ -1.91
RBM39-231	ENST00000477334	ERVPABLB-1	P60509	514 aa		3.11	□□□□□ -1.91
RBM39-231	ENST00000477334	IL9R	Q01113	521 aa		3.11	□□□□□ -1.91
RBM39-231	ENST00000477334	PUDP	Q08623	228 aa		3.11	□□□□□ -1.91
RBM39-231	ENST00000477334	PRR30	Q53SZ7	412 aa	Predicted RBP	3.11	□□□□□ -1.91
RBM39-231	ENST00000477334	FHL5	Q5TD97	284 aa		3.11	□□□□□ -1.91
RBM39-231	ENST00000477334	SLX4IP	Q5VYV7	408 aa		3.11	□□□□□ -1.91
RBM39-231	ENST00000477334	SLC39A4	Q6P5W5	647 aa		3.11	□□□□□ -1.91
RBM39-231	ENST00000477334	NET1	Q7Z628	596 aa	Predicted RBP	3.11	□□□□□ -1.91
RBM39-231	ENST00000477334	MINDY2	Q8NBR6	621 aa		3.11	□□□□□ -1.91
RBM39-231	ENST00000477334	OR56B1	Q8NGI3	324 aa		3.11	□□□□□ -1.91
RBM39-231	ENST00000477334	CCDC26	Q8TAB7	109 aa		3.11	□□□□□ -1.91
RBM39-231	ENST00000477334	ART4	Q93070	314 aa		3.11	□□□□□ -1.91
RBM39-231	ENST00000477334	MCHR2	Q969V1	340 aa		3.11	□□□□□ -1.91
RBM39-231	ENST00000477334	NCLN	Q969V3	563 aa		3.11	□□□□□ -1.91
RBM39-231	ENST00000477334	TADA1	Q96BN2	335 aa		3.11	□□□□□ -1.91
RBM39-231	ENST00000477334	VSIG2	Q96IQ7	327 aa		3.11	□□□□□ -1.91
RBM39-231	ENST00000477334	PAXX	Q9BUH6	204 aa		3.11	□□□□□ -1.91
RBM39-231	ENST00000477334	NMNAT2	Q9BZQ4	307 aa		3.11	□□□□□ -1.91
RBM39-231	ENST00000477334	RWDD1	Q9H446	243 aa	Predicted RBP	3.11	□□□□□ -1.91
RBM39-231	ENST00000477334	KAT8	Q9H7Z6	458 aa	Known RBP	3.11	□□□□□ -1.91
RBM39-231	ENST00000477334	MEPE	Q9NQ76	525 aa	Predicted RBP	3.11	□□□□□ -1.91
RBM39-231	ENST00000477334	SOHLH2	Q9NX45	425 aa		3.11	□□□□□ -1.91
RBM39-231	ENST00000477334	CLEC4E	Q9ULY5	219 aa		3.11	□□□□□ -1.91
RBM39-231	ENST00000477334	PLEKHA6	Q9Y2H5	1048 aa		3.11	□□□□□ -1.91
RBM39-231	ENST00000477334	KLLN	B2CW77	178 aa		3.1	□□□□□ -1.91
RBM39-231	ENST00000477334	SLC17A2	O00624	439 aa		3.1	□□□□□ -1.91
RBM39-231	ENST00000477334	HAT1	O14929	419 aa		3.1	□□□□□ -1.91
RBM39-231	ENST00000477334	ALOX15B	O15296	676 aa		3.1	□□□□□ -1.91
RBM39-231	ENST00000477334	NOL3	O60936	208 aa	Known RBP	3.1	□□□□□ -1.91
RBM39-231	ENST00000477334	NOL4	O94818	638 aa		3.1	□□□□□ -1.91
RBM39-231	ENST00000477334	NDUFA7	O95182	113 aa		3.1	□□□□□ -1.91
RBM39-231	ENST00000477334	IGFBP1	P08833	259 aa	Predicted RBP	3.1	□□□□□ -1.91
RBM39-231	ENST00000477334	KRTAP1-4	P0C5Y4	121 aa		3.1	□□□□□ -1.91
RBM39-231	ENST00000477334	PTBP1	P26599	531 aa	Known RBP eCLIP	3.1	□□□□□ -1.91
RBM39-231	ENST00000477334	RPA1	P27694	616 aa		3.1	□□□□□ -1.91
RBM39-231	ENST00000477334	RPS6	P62753	249 aa	Known RBP	3.1	□□□□□ -1.91
RBM39-231	ENST00000477334	HMGN5	P82970	282 aa	Known RBP	3.1	□□□□□ -1.91
RBM39-231	ENST00000477334	NDP	Q00604	133 aa		3.1	□□□□□ -1.91
RBM39-231	ENST00000477334	CD47	Q08722	323 aa		3.1	□□□□□ -1.91
RBM39-231	ENST00000477334	UBE2V2	Q15819	145 aa		3.1	□□□□□ -1.91
RBM39-231	ENST00000477334	MEDAG	Q5VYS4	303 aa		3.1	□□□□□ -1.91
RBM39-231	ENST00000477334	SLC22A10	Q63ZE4	541 aa		3.1	□□□□□ -1.91
RBM39-231	ENST00000477334	OLFML2A	Q68BL7	652 aa		3.1	□□□□□ -1.91
RBM39-231	ENST00000477334	IRGC	Q6NXR0	463 aa		3.1	□□□□□ -1.91
RBM39-231	ENST00000477334	LEG1	Q6P5S2	330 aa		3.1	□□□□□ -1.91
RBM39-231	ENST00000477334		Q7L0L9	218 aa		3.1	□□□□□ -1.91
RBM39-231	ENST00000477334	PARG	Q86W56	976 aa		3.1	□□□□□ -1.91
RBM39-231	ENST00000477334	MCOLN2	Q8IZK6	566 aa		3.1	□□□□□ -1.91
RBM39-231	ENST00000477334	HDDC3	Q8N4P3	179 aa		3.1	□□□□□ -1.91
RBM39-231	ENST00000477334	MRPL43	Q8N983	215 aa	Known RBP	3.1	□□□□□ -1.91
RBM39-231	ENST00000477334	BAD	Q92934	168 aa		3.1	□□□□□ -1.91
RBM39-231	ENST00000477334	SLC25A36	Q96CQ1	311 aa		3.1	□□□□□ -1.91
RBM39-231	ENST00000477334	FAM111A	Q96PZ2	611 aa		3.1	□□□□□ -1.91
RBM39-231	ENST00000477334	WRAP53	Q9BUR4	548 aa	Known RBP	3.1	□□□□□ -1.91
RBM39-231	ENST00000477334	TM2D1	Q9BX74	207 aa		3.1	□□□□□ -1.91
RBM39-231	ENST00000477334	ELOVL4	Q9GZR5	314 aa		3.1	□□□□□ -1.91
RBM39-231	ENST00000477334	RAB17	Q9H0T7	212 aa		3.1	□□□□□ -1.91
RBM39-231	ENST00000477334	OPN3	Q9H1Y3	402 aa	Predicted RBP	3.1	□□□□□ -1.91
RBM39-231	ENST00000477334	ROPN1	Q9HAT0	212 aa	Predicted RBP	3.1	□□□□□ -1.91
RBM39-231	ENST00000477334	YAE1D1	Q9NRH1	226 aa		3.1	□□□□□ -1.91
RBM39-231	ENST00000477334	ELOVL2	Q9NXB9	296 aa		3.1	□□□□□ -1.91
RBM39-231	ENST00000477334	ACTR3B	Q9P1U1	418 aa		3.1	□□□□□ -1.91
RBM39-231	ENST00000477334	PIN4	Q9Y237	131 aa	Known RBP	3.1	□□□□□ -1.91
RBM39-231	ENST00000477334	EXOSC1	Q9Y3B2	195 aa	Known RBP	3.1	□□□□□ -1.91
RBM39-231	ENST00000477334	ABCC4	O15439	1325 aa		3.1	□□□□□ -1.91
RBM39-231	ENST00000477334	IGKV6D-41	A0A0C4DH26	115 aa		3.09	□□□□□ -1.91
RBM39-231	ENST00000477334	FBLL1	A6NHQ2	334 aa	Known RBP	3.09	□□□□□ -1.91
RBM39-231	ENST00000477334		H3BTX0	84 aa		3.09	□□□□□ -1.91
RBM39-231	ENST00000477334	CASK	O14936	926 aa		3.09	□□□□□ -1.91
RBM39-231	ENST00000477334	PPIH	O43447	177 aa	Known RBP	3.09	□□□□□ -1.91
RBM39-231	ENST00000477334	HMMR	O75330	724 aa		3.09	□□□□□ -1.91
RBM39-231	ENST00000477334	PTBP3	O95758	552 aa	Known RBP	3.09	□□□□□ -1.91
RBM39-231	ENST00000477334	LY6G6D	O95868	133 aa		3.09	□□□□□ -1.91
RBM39-231	ENST00000477334	GSTT2	P0CG29	244 aa		3.09	□□□□□ -1.91
RBM39-231	ENST00000477334	GSTT2B	P0CG30	244 aa		3.09	□□□□□ -1.91
RBM39-231	ENST00000477334	DNAH10OS	P0CZ25	163 aa		3.09	□□□□□ -1.91
RBM39-231	ENST00000477334	ARF4	P18085	180 aa	Predicted RBP	3.09	□□□□□ -1.91
RBM39-231	ENST00000477334	AZU1	P20160	251 aa		3.09	□□□□□ -1.91
RBM39-231	ENST00000477334	PRKAR2B	P31323	418 aa		3.09	□□□□□ -1.91
RBM39-231	ENST00000477334	PRPH	P41219	470 aa		3.09	□□□□□ -1.91
RBM39-231	ENST00000477334	HSD17B7	P56937	341 aa		3.09	□□□□□ -1.91
RBM39-231	ENST00000477334	GMFB	P60983	142 aa		3.09	□□□□□ -1.91
RBM39-231	ENST00000477334	RFTN1	Q14699	578 aa	Predicted RBP	3.09	□□□□□ -1.91
RBM39-231	ENST00000477334	BTNL3	Q6UXE8	466 aa		3.09	□□□□□ -1.91
RBM39-231	ENST00000477334	ISLR2	Q6UXK2	745 aa		3.09	□□□□□ -1.91
RBM39-231	ENST00000477334	FBXO16	Q8IX29	292 aa	Predicted RBP	3.09	□□□□□ -1.91
RBM39-231	ENST00000477334	GPR65	Q8IYL9	337 aa		3.09	□□□□□ -1.91
RBM39-231	ENST00000477334	FAM71C	Q8NEG0	241 aa		3.09	□□□□□ -1.91
RBM39-231	ENST00000477334	NFAM1	Q8NET5	270 aa	Predicted RBP	3.09	□□□□□ -1.91
RBM39-231	ENST00000477334	CCDC110	Q8TBZ0	833 aa		3.09	□□□□□ -1.91
RBM39-231	ENST00000477334	ADIPOR1	Q96A54	375 aa		3.09	□□□□□ -1.91
RBM39-231	ENST00000477334	YTHDF1	Q9BYJ9	559 aa	Known RBP	3.09	□□□□□ -1.91

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