RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 SLCO1A2P46721 670 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 RPS5P46782 204 aaKnown RBP2.25□□□□□ -2.05
XRN1-211ENST00000477237 KCNJ3P48549 501 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 TGM4P49221 684 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 CDK9P50750 372 aaKnown RBP2.25□□□□□ -2.05
XRN1-211ENST00000477237 RAD23BP54727 409 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 UCP2P55851 309 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 CXCR4P61073 352 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 ATP6V0D1P61421 351 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 CACNG1Q06432 222 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 SLC3A1Q07837 685 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 FOXM1Q08050 763 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 SLAMF1Q13291 335 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 ALCAMQ13740 583 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 SNTB1Q13884 538 aaKnown RBP2.25□□□□□ -2.05
XRN1-211ENST00000477237 BAATQ14032 418 aaPredicted RBP2.25□□□□□ -2.05
XRN1-211ENST00000477237 C5orf64Q2M2E5 130 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 GOLGA7BQ2TAP0 167 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 KIAA1644Q3SXP7 199 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 TAF1BQ53T94 588 aaPredicted RBP2.25□□□□□ -2.05
XRN1-211ENST00000477237 ZNF667Q5HYK9 610 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 TCHHL1Q5QJ38 904 aaPredicted RBP2.25□□□□□ -2.05
XRN1-211ENST00000477237 CELF3Q5SZQ8 465 aaKnown RBP2.25□□□□□ -2.05
XRN1-211ENST00000477237 PDZK1Q5T2W1 519 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 GCNT6Q5T4J0 391 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 C20orf194Q5TEA3 1177 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 ATF7IP2Q5U623 682 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 ALS2CLQ60I27 953 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 HIST2H2BDQ6DRA6 164 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 OR52E8Q6IFG1 317 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 OR6B2Q6IFH4 312 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 PYHIN1Q6K0P9 492 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 PMF1Q6P1K2 205 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 C1orf94Q6P1W5 598 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 CCDC137Q6PK04 289 aaKnown RBP2.25□□□□□ -2.05
XRN1-211ENST00000477237 PLEKHG7Q6ZR37 379 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 TRMT11Q7Z4G4 463 aaKnown RBP2.25□□□□□ -2.05
XRN1-211ENST00000477237 GPR180Q86V85 440 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 CYP4Z1Q86W10 505 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 RALGPS2Q86X27 583 aaPredicted RBP2.25□□□□□ -2.05
XRN1-211ENST00000477237 HPS6Q86YV9 775 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 PLCZ1Q86YW0 608 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 DHX40Q8IX18 779 aaKnown RBP2.25□□□□□ -2.05
XRN1-211ENST00000477237 C11orf53Q8IXP5 236 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 PRSS58Q8IYP2 241 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 ZNF786Q8N393 782 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 FRMD1Q8N878 549 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 C12orf29Q8N999 325 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 SLC37A3Q8NCC5 494 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 C19orf18Q8NEA5 215 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 ACVR1CQ8NER5 493 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 GPRC5AQ8NFJ5 357 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 RDM1Q8NG50 284 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 OR4K14Q8NGD5 310 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 OR5R1Q8NH85 324 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 OR10J5Q8NHC4 309 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 C9orf43Q8TAL5 461 aaPredicted RBP2.25□□□□□ -2.05
XRN1-211ENST00000477237 RAET1EQ8TD07 263 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 GLYATL2Q8WU03 294 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 KCTD4Q8WVF5 259 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 MRPS27Q92552 414 aaKnown RBP2.25□□□□□ -2.05
XRN1-211ENST00000477237 CPNE4Q96A23 557 aaPredicted RBP2.25□□□□□ -2.05
XRN1-211ENST00000477237 TMEM143Q96AN5 459 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 HAUS1Q96CS2 278 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 HAVCR1Q96D42 359 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 ECHDC3Q96DC8 303 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 PDXPQ96GD0 296 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 C5orf30Q96GV9 206 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 PRRC1Q96M27 445 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 PARK7Q99497 189 aaKnown RBP2.25□□□□□ -2.05
XRN1-211ENST00000477237 SSX3Q99909 188 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 HSD17B14Q9BPX1 270 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 FAM110AQ9BQ89 295 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 MGME1Q9BQP7 344 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 PIGQQ9BRB3 760 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 NAT9Q9BTE0 207 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 ANKRD60Q9BZ19 345 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 PRRG3Q9BZD7 231 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 OSBPL8Q9BZF1 889 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 P2RY12Q9H244 342 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 C11orf49Q9H6J7 331 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 CAB39LQ9H9S4 337 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 FN3KRPQ9HA64 309 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP2.25□□□□□ -2.05
XRN1-211ENST00000477237 STAU2Q9NUL3 570 aaKnown RBP eCLIP2.25□□□□□ -2.05
XRN1-211ENST00000477237 PARVAQ9NVD7 372 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 PRMT7Q9NVM4 692 aaPredicted RBP2.25□□□□□ -2.05
XRN1-211ENST00000477237 GIN1Q9NXP7 522 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 NDE1Q9NXR1 346 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 SLCO1C1Q9NYB5 712 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 PLEK2Q9NYT0 353 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 MPP6Q9NZW5 540 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 KIAA1456Q9P272 454 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 TXNDC16Q9P2K2 825 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 ARMCX3Q9UH62 379 aaPredicted RBP2.25□□□□□ -2.05
XRN1-211ENST00000477237 DAPK2Q9UIK4 370 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 TRMT6Q9UJA5 497 aaKnown RBP2.25□□□□□ -2.05
XRN1-211ENST00000477237 RPH3ALQ9UNE2 315 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 ABCG2Q9UNQ0 655 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 STARD10Q9Y365 291 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms