RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 ERRFI1Q9UJM3 462 aaPredicted RBP8.87□□□□□ -0.99
HDAC3-208ENST00000476739 MAPRE3Q9UPY8 281 aa8.87□□□□□ -0.99
HDAC3-208ENST00000476739 DNAJC13O75165 2243 aa8.86□□□□□ -0.99
HDAC3-208ENST00000476739 HIVEP3Q5T1R4 2406 aa8.86□□□□□ -0.99
HDAC3-208ENST00000476739 RP1L1Q8IWN7 2480 aaPredicted RBP8.86□□□□□ -0.99
HDAC3-208ENST00000476739 PRAMEF25A6NGN4 478 aa8.86□□□□□ -0.99
HDAC3-208ENST00000476739 ACOT7O00154 380 aa8.86□□□□□ -0.99
HDAC3-208ENST00000476739 SLC22A3O75751 556 aa8.86□□□□□ -0.99
HDAC3-208ENST00000476739 KCNK2O95069 426 aa8.86□□□□□ -0.99
HDAC3-208ENST00000476739 IL33O95760 270 aa8.86□□□□□ -0.99
HDAC3-208ENST00000476739 PGRP06401 933 aa8.86□□□□□ -0.99
HDAC3-208ENST00000476739 ENDOUP21128 410 aaKnown RBP8.86□□□□□ -0.99
HDAC3-208ENST00000476739 IL12BP29460 328 aa8.86□□□□□ -0.99
HDAC3-208ENST00000476739 S100A3P33764 101 aa8.86□□□□□ -0.99
HDAC3-208ENST00000476739 MAN2A2P49641 1150 aa8.86□□□□□ -0.99
HDAC3-208ENST00000476739 GAS1P54826 345 aa8.86□□□□□ -0.99
HDAC3-208ENST00000476739 MRPS22P82650 360 aaKnown RBP8.86□□□□□ -0.99
HDAC3-208ENST00000476739 PRR5P85299 388 aa8.86□□□□□ -0.99
HDAC3-208ENST00000476739 ZNHIT3Q15649 155 aaPredicted RBP8.86□□□□□ -0.99
HDAC3-208ENST00000476739 C3AR1Q16581 482 aa8.86□□□□□ -0.99
HDAC3-208ENST00000476739 DECR1Q16698 335 aa8.86□□□□□ -0.99
HDAC3-208ENST00000476739 GSTA3Q16772 222 aa8.86□□□□□ -0.99
HDAC3-208ENST00000476739 DPY19L1Q2PZI1 675 aa8.86□□□□□ -0.99
HDAC3-208ENST00000476739 SPDYE7PQ495Y7 208 aa8.86□□□□□ -0.99
HDAC3-208ENST00000476739 CYP27C1Q4G0S4 372 aa8.86□□□□□ -0.99
HDAC3-208ENST00000476739 TBCELQ5QJ74 424 aa8.86□□□□□ -0.99
HDAC3-208ENST00000476739 CCNJQ5T5M9 372 aa8.86□□□□□ -0.99
HDAC3-208ENST00000476739 C1QL3Q5VWW1 255 aa8.86□□□□□ -0.99
HDAC3-208ENST00000476739 OR5M10Q6IEU7 315 aa8.86□□□□□ -0.99
HDAC3-208ENST00000476739 CGB2Q6NT52 195 aa8.86□□□□□ -0.99
HDAC3-208ENST00000476739 CDC73Q6P1J9 531 aa8.86□□□□□ -0.99
HDAC3-208ENST00000476739 TMEM81Q6P7N7 255 aa8.86□□□□□ -0.99
HDAC3-208ENST00000476739 APOOLQ6UXV4 268 aa8.86□□□□□ -0.99
HDAC3-208ENST00000476739 ACAD11Q709F0 780 aa8.86□□□□□ -0.99
HDAC3-208ENST00000476739 OLIG3Q7RTU3 272 aa8.86□□□□□ -0.99
HDAC3-208ENST00000476739 SLC22A16Q86VW1 577 aa8.86□□□□□ -0.99
HDAC3-208ENST00000476739 SPPL2CQ8IUH8 684 aa8.86□□□□□ -0.99
HDAC3-208ENST00000476739 FAM109AQ8N4B1 249 aa8.86□□□□□ -0.99
HDAC3-208ENST00000476739 WDSUB1Q8N9V3 476 aa8.86□□□□□ -0.99
HDAC3-208ENST00000476739 OR56A1Q8NGH5 318 aa8.86□□□□□ -0.99
HDAC3-208ENST00000476739 OR5D16Q8NGK9 328 aa8.86□□□□□ -0.99
HDAC3-208ENST00000476739 FAM110BQ8TC76 370 aa8.86□□□□□ -0.99
HDAC3-208ENST00000476739 SFXN5Q8TD22 340 aa8.86□□□□□ -0.99
HDAC3-208ENST00000476739 CDS1Q92903 461 aa8.86□□□□□ -0.99
HDAC3-208ENST00000476739 TMCO6Q96DC7 493 aa8.86□□□□□ -0.99
HDAC3-208ENST00000476739 TMEM41AQ96HV5 264 aa8.86□□□□□ -0.99
HDAC3-208ENST00000476739 CCDC115Q96NT0 180 aa8.86□□□□□ -0.99
HDAC3-208ENST00000476739 CCDC28BQ9BUN5 200 aa8.86□□□□□ -0.99
HDAC3-208ENST00000476739 OSBPL11Q9BXB4 747 aa8.86□□□□□ -0.99
HDAC3-208ENST00000476739 UBQLN3Q9H347 655 aa8.86□□□□□ -0.99
HDAC3-208ENST00000476739 NEUROD4Q9HD90 331 aa8.86□□□□□ -0.99
HDAC3-208ENST00000476739 PLSCR2Q9NRY7 297 aa8.86□□□□□ -0.99
HDAC3-208ENST00000476739 SLC6A13Q9NSD5 602 aa8.86□□□□□ -0.99
HDAC3-208ENST00000476739 FGFR1OP2Q9NVK5 253 aa8.86□□□□□ -0.99
HDAC3-208ENST00000476739 KLRF1Q9NZS2 232 aa8.86□□□□□ -0.99
HDAC3-208ENST00000476739 ZIM2Q9NZV7 527 aa8.86□□□□□ -0.99
HDAC3-208ENST00000476739 BTNL2Q9UIR0 455 aa8.86□□□□□ -0.99
HDAC3-208ENST00000476739 DCTN4Q9UJW0 460 aa8.86□□□□□ -0.99
HDAC3-208ENST00000476739 BOKQ9UMX3 212 aaPredicted RBP8.86□□□□□ -0.99
HDAC3-208ENST00000476739 ZNF835Q9Y2P0 537 aa8.86□□□□□ -0.99
HDAC3-208ENST00000476739 PCNX3Q9H6A9 2034 aa8.86□□□□□ -0.99
HDAC3-208ENST00000476739 GCN1Q92616 2671 aaKnown RBP8.86□□□□□ -0.99
HDAC3-208ENST00000476739 TRGV8A0A0C4DH27 118 aa8.85□□□□□ -0.99
HDAC3-208ENST00000476739 RNF103-CHMP3A0A140T963 221 aa8.85□□□□□ -0.99
HDAC3-208ENST00000476739 SNPHO15079 494 aa8.85□□□□□ -0.99
HDAC3-208ENST00000476739 SCO2O43819 266 aa8.85□□□□□ -0.99
HDAC3-208ENST00000476739 FADS1O60427 444 aa8.85□□□□□ -0.99
HDAC3-208ENST00000476739 SLC19A2O60779 497 aa8.85□□□□□ -0.99
HDAC3-208ENST00000476739 ABCB7O75027 752 aa8.85□□□□□ -0.99
HDAC3-208ENST00000476739 SNX4O95219 450 aa8.85□□□□□ -0.99
HDAC3-208ENST00000476739 UTS2O95399 124 aa8.85□□□□□ -0.99
HDAC3-208ENST00000476739 GSNP06396 782 aa8.85□□□□□ -0.99
HDAC3-208ENST00000476739 STSP08842 583 aa8.85□□□□□ -0.99
HDAC3-208ENST00000476739 ALOX5P09917 674 aa8.85□□□□□ -0.99
HDAC3-208ENST00000476739 PTPN6P29350 595 aa8.85□□□□□ -0.99
HDAC3-208ENST00000476739 EVI2BP34910 448 aa8.85□□□□□ -0.99
HDAC3-208ENST00000476739 KRT20P35900 424 aa8.85□□□□□ -0.99
HDAC3-208ENST00000476739 MASP1P48740 699 aa8.85□□□□□ -0.99
HDAC3-208ENST00000476739 PRIM2P49643 509 aa8.85□□□□□ -0.99
HDAC3-208ENST00000476739 RPP38P78345 283 aaKnown RBP8.85□□□□□ -0.99
HDAC3-208ENST00000476739 EFR3AQ14156 821 aa8.85□□□□□ -0.99
HDAC3-208ENST00000476739 GRAMD1BQ3KR37 738 aa8.85□□□□□ -0.99
HDAC3-208ENST00000476739 ANXA8L1Q5VT79 327 aa8.85□□□□□ -0.99
HDAC3-208ENST00000476739 TIGD3Q6B0B8 471 aa8.85□□□□□ -0.99
HDAC3-208ENST00000476739 SLC30A6Q6NXT4 461 aa8.85□□□□□ -0.99
HDAC3-208ENST00000476739 ZCCHC12Q6PEW1 402 aa8.85□□□□□ -0.99
HDAC3-208ENST00000476739 ANGPTL8Q6UXH0 198 aa8.85□□□□□ -0.99
HDAC3-208ENST00000476739 BNC2Q6ZN30 1099 aaPredicted RBP8.85□□□□□ -0.99
HDAC3-208ENST00000476739 NCCRP1Q6ZVX7 275 aaPredicted RBP8.85□□□□□ -0.99
HDAC3-208ENST00000476739 C6orf120Q7Z4R8 191 aa8.85□□□□□ -0.99
HDAC3-208ENST00000476739 FJX1Q86VR8 437 aa8.85□□□□□ -0.99
HDAC3-208ENST00000476739 FUNDC1Q8IVP5 155 aa8.85□□□□□ -0.99
HDAC3-208ENST00000476739 GHDCQ8N2G8 530 aa8.85□□□□□ -0.99
HDAC3-208ENST00000476739 MIER2Q8N344 545 aa8.85□□□□□ -0.99
HDAC3-208ENST00000476739 FAM26EQ8N5C1 309 aa8.85□□□□□ -0.99
HDAC3-208ENST00000476739 ARFGAP2Q8N6H7 521 aa8.85□□□□□ -0.99
HDAC3-208ENST00000476739 GOT1L1Q8NHS2 421 aaPredicted RBP8.85□□□□□ -0.99
HDAC3-208ENST00000476739 VPS33AQ96AX1 596 aa8.85□□□□□ -0.99
HDAC3-208ENST00000476739 CHMP6Q96FZ7 201 aa8.85□□□□□ -0.99
HDAC3-208ENST00000476739 ZNF597Q96LX8 424 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms