RNA–Protein interactions for RNA: ENST00000475524.1

MCF2L-224, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-224ENST00000475524 IL12BP29460 328 aa13.97□□□□□ -0.17
MCF2L-224ENST00000475524 CASRP41180 1078 aa13.97□□□□□ -0.17
MCF2L-224ENST00000475524 GSK3BP49841 420 aa13.97□□□□□ -0.17
MCF2L-224ENST00000475524 HLCSP50747 726 aa13.97□□□□□ -0.17
MCF2L-224ENST00000475524 CCL11P51671 97 aa13.97□□□□□ -0.17
MCF2L-224ENST00000475524 NCALDP61601 193 aa13.97□□□□□ -0.17
MCF2L-224ENST00000475524 CXADRP78310 365 aa13.97□□□□□ -0.17
MCF2L-224ENST00000475524 RPP38P78345 283 aaKnown RBP13.97□□□□□ -0.17
MCF2L-224ENST00000475524 CDK6Q00534 326 aa13.97□□□□□ -0.17
MCF2L-224ENST00000475524 LIPEQ05469 1076 aa13.97□□□□□ -0.17
MCF2L-224ENST00000475524 FUT5Q11128 374 aa13.97□□□□□ -0.17
MCF2L-224ENST00000475524 VMACQ2NL98 169 aa13.97□□□□□ -0.17
MCF2L-224ENST00000475524 ZNF791Q3KP31 576 aaPredicted RBP13.97□□□□□ -0.17
MCF2L-224ENST00000475524 REEP3Q6NUK4 255 aa13.97□□□□□ -0.17
MCF2L-224ENST00000475524 WDR53Q7Z5U6 358 aaPredicted RBP13.97□□□□□ -0.17
MCF2L-224ENST00000475524 ZZZ3Q8IYH5 903 aa13.97□□□□□ -0.17
MCF2L-224ENST00000475524 MICU2Q8IYU8 434 aa13.97□□□□□ -0.17
MCF2L-224ENST00000475524 C10orf111Q8N326 155 aa13.97□□□□□ -0.17
MCF2L-224ENST00000475524 TMEM156Q8N614 296 aa13.97□□□□□ -0.17
MCF2L-224ENST00000475524 GOLM1Q8NBJ4 401 aa13.97□□□□□ -0.17
MCF2L-224ENST00000475524 HIPK4Q8NE63 616 aa13.97□□□□□ -0.17
MCF2L-224ENST00000475524 FDCSPQ8NFU4 85 aa13.97□□□□□ -0.17
MCF2L-224ENST00000475524 BBS10Q8TAM1 723 aa13.97□□□□□ -0.17
MCF2L-224ENST00000475524 FBXO30Q8TB52 745 aa13.97□□□□□ -0.17
MCF2L-224ENST00000475524 THAP3Q8WTV1 239 aaPredicted RBP13.97□□□□□ -0.17
MCF2L-224ENST00000475524 SLC38A5Q8WUX1 472 aa13.97□□□□□ -0.17
MCF2L-224ENST00000475524 PIK3R3Q92569 461 aa13.97□□□□□ -0.17
MCF2L-224ENST00000475524 RAB8BQ92930 207 aa13.97□□□□□ -0.17
MCF2L-224ENST00000475524 COL21A1Q96P44 957 aa13.97□□□□□ -0.17
MCF2L-224ENST00000475524 CDRT15Q96T59 188 aa13.97□□□□□ -0.17
MCF2L-224ENST00000475524 HOXD1Q9GZZ0 328 aa13.97□□□□□ -0.17
MCF2L-224ENST00000475524 MUC13Q9H3R2 512 aa13.97□□□□□ -0.17
MCF2L-224ENST00000475524 STMN3Q9NZ72 180 aa13.97□□□□□ -0.17
MCF2L-224ENST00000475524 ADA2Q9NZK5 511 aa13.97□□□□□ -0.17
MCF2L-224ENST00000475524 SUCOQ9UBS9 1254 aaKnown RBP13.97□□□□□ -0.17
MCF2L-224ENST00000475524 ZMIZ1Q9ULJ6 1067 aa13.97□□□□□ -0.17
MCF2L-224ENST00000475524 ABCG2Q9UNQ0 655 aa13.97□□□□□ -0.17
MCF2L-224ENST00000475524 ANGPT4Q9Y264 503 aa13.97□□□□□ -0.17
MCF2L-224ENST00000475524 KCNE3Q9Y6H6 103 aa13.97□□□□□ -0.17
MCF2L-224ENST00000475524 PTPRQQ9UMZ3 2332 aa13.96□□□□□ -0.17
MCF2L-224ENST00000475524 A0A0G2JPF8 293 aa13.96□□□□□ -0.17
MCF2L-224ENST00000475524 GXYLT2A0PJZ3 443 aa13.96□□□□□ -0.17
MCF2L-224ENST00000475524 ELOVL7A1L3X0 281 aa13.96□□□□□ -0.17
MCF2L-224ENST00000475524 PRORSD1PA6NEY8 169 aa13.96□□□□□ -0.17
MCF2L-224ENST00000475524 HNRNPCL2B2RXH8 293 aa13.96□□□□□ -0.17
MCF2L-224ENST00000475524 HNRNPCL3B7ZW38 293 aa13.96□□□□□ -0.17
MCF2L-224ENST00000475524 C5orf58C9J3I9 102 aa13.96□□□□□ -0.17
MCF2L-224ENST00000475524 MKRN2OSH3BPM6 223 aa13.96□□□□□ -0.17
MCF2L-224ENST00000475524 TP53I11O14683 189 aa13.96□□□□□ -0.17
MCF2L-224ENST00000475524 RRP9O43818 475 aaKnown RBP13.96□□□□□ -0.17
MCF2L-224ENST00000475524 HS6ST1O60243 411 aa13.96□□□□□ -0.17
MCF2L-224ENST00000475524 KIAA0513O60268 411 aa13.96□□□□□ -0.17
MCF2L-224ENST00000475524 PDE9AO76083 593 aa13.96□□□□□ -0.17
MCF2L-224ENST00000475524 HNRNPCL4P0DMR1 293 aa13.96□□□□□ -0.17
MCF2L-224ENST00000475524 ETS2P15036 469 aa13.96□□□□□ -0.17
MCF2L-224ENST00000475524 SOX3P41225 446 aa13.96□□□□□ -0.17
MCF2L-224ENST00000475524 BNIP2Q12982 314 aa13.96□□□□□ -0.17
MCF2L-224ENST00000475524 SCARB2Q14108 478 aa13.96□□□□□ -0.17
MCF2L-224ENST00000475524 MAPK11Q15759 364 aa13.96□□□□□ -0.17
MCF2L-224ENST00000475524 NNATQ16517 81 aa13.96□□□□□ -0.17
MCF2L-224ENST00000475524 TBR1Q16650 682 aa13.96□□□□□ -0.17
MCF2L-224ENST00000475524 B3GNTL1Q67FW5 361 aaPredicted RBP13.96□□□□□ -0.17
MCF2L-224ENST00000475524 IGFL3Q6UXB1 125 aa13.96□□□□□ -0.17
MCF2L-224ENST00000475524 ASRGL1Q7L266 308 aa13.96□□□□□ -0.17
MCF2L-224ENST00000475524 PTRH1Q86Y79 214 aaKnown RBP13.96□□□□□ -0.17
MCF2L-224ENST00000475524 BEST3Q8N1M1 668 aa13.96□□□□□ -0.17
MCF2L-224ENST00000475524 OR4N2Q8NGD1 307 aa13.96□□□□□ -0.17
MCF2L-224ENST00000475524 RNF138Q8WVD3 245 aa13.96□□□□□ -0.17
MCF2L-224ENST00000475524 TM9SF4Q92544 642 aa13.96□□□□□ -0.17
MCF2L-224ENST00000475524 HAS2Q92819 552 aa13.96□□□□□ -0.17
MCF2L-224ENST00000475524 TMBIM1Q969X1 311 aa13.96□□□□□ -0.17
MCF2L-224ENST00000475524 TMEM19Q96HH6 336 aa13.96□□□□□ -0.17
MCF2L-224ENST00000475524 KCTD14Q9BQ13 255 aaPredicted RBP13.96□□□□□ -0.17
MCF2L-224ENST00000475524 TRIM8Q9BZR9 551 aa13.96□□□□□ -0.17
MCF2L-224ENST00000475524 ADNPQ9H2P0 1102 aa13.96□□□□□ -0.17
MCF2L-224ENST00000475524 PRORYQ9H606 182 aa13.96□□□□□ -0.17
MCF2L-224ENST00000475524 WDR45Q9Y484 360 aa13.96□□□□□ -0.17
MCF2L-224ENST00000475524 PRAMEF27A3QJZ7 478 aa13.95□□□□□ -0.18
MCF2L-224ENST00000475524 NPIPB9F8W1W9 429 aa13.95□□□□□ -0.18
MCF2L-224ENST00000475524 GSC2O15499 205 aa13.95□□□□□ -0.18
MCF2L-224ENST00000475524 SLC28A2O43868 658 aa13.95□□□□□ -0.18
MCF2L-224ENST00000475524 ZNF354AO60765 605 aaPredicted RBP13.95□□□□□ -0.18
MCF2L-224ENST00000475524 REM1O75628 298 aa13.95□□□□□ -0.18
MCF2L-224ENST00000475524 PGM3O95394 542 aa13.95□□□□□ -0.18
MCF2L-224ENST00000475524 H6PDO95479 791 aa13.95□□□□□ -0.18
MCF2L-224ENST00000475524 BCHEP06276 602 aa13.95□□□□□ -0.18
MCF2L-224ENST00000475524 NUDT7P0C024 238 aa13.95□□□□□ -0.18
MCF2L-224ENST00000475524 ENDOUP21128 410 aaKnown RBP13.95□□□□□ -0.18
MCF2L-224ENST00000475524 CYB561P49447 251 aa13.95□□□□□ -0.18
MCF2L-224ENST00000475524 CASP9P55211 416 aa13.95□□□□□ -0.18
MCF2L-224ENST00000475524 PCBP3P57721 371 aaKnown RBP13.95□□□□□ -0.18
MCF2L-224ENST00000475524 RHDQ02161 417 aa13.95□□□□□ -0.18
MCF2L-224ENST00000475524 ELOAQ14241 798 aaKnown RBP13.95□□□□□ -0.18
MCF2L-224ENST00000475524 SYPL1Q16563 259 aa13.95□□□□□ -0.18
MCF2L-224ENST00000475524 ZSWIM7Q19AV6 140 aa13.95□□□□□ -0.18
MCF2L-224ENST00000475524 GPAT3Q53EU6 434 aa13.95□□□□□ -0.18
MCF2L-224ENST00000475524 FCRLBQ6BAA4 426 aa13.95□□□□□ -0.18
MCF2L-224ENST00000475524 PGM2L1Q6PCE3 622 aa13.95□□□□□ -0.18
MCF2L-224ENST00000475524 FRRS1Q6ZNA5 592 aa13.95□□□□□ -0.18
MCF2L-224ENST00000475524 RTL4Q6ZR62 310 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms