RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 MADCAM1Q13477 382 aa5.63□□□□□ -1.51
ECHDC1-215ENST00000475319 GPM6BQ13491 265 aa5.63□□□□□ -1.51
ECHDC1-215ENST00000475319 GPR176Q14439 515 aa5.63□□□□□ -1.51
ECHDC1-215ENST00000475319 UBXN2BQ14CS0 331 aa5.63□□□□□ -1.51
ECHDC1-215ENST00000475319 TEX44Q53QW1 395 aa5.63□□□□□ -1.51
ECHDC1-215ENST00000475319 PHF19Q5T6S3 580 aa5.63□□□□□ -1.51
ECHDC1-215ENST00000475319 FAXCQ5TGI0 409 aa5.63□□□□□ -1.51
ECHDC1-215ENST00000475319 ZDHHC20Q5W0Z9 365 aa5.63□□□□□ -1.51
ECHDC1-215ENST00000475319 TTC23Q5W5X9 447 aa5.63□□□□□ -1.51
ECHDC1-215ENST00000475319 B3GNTL1Q67FW5 361 aaPredicted RBP5.63□□□□□ -1.51
ECHDC1-215ENST00000475319 SULT6B1Q6IMI4 303 aa5.63□□□□□ -1.51
ECHDC1-215ENST00000475319 TAPT1Q6NXT6 567 aa5.63□□□□□ -1.51
ECHDC1-215ENST00000475319 ULK3Q6PHR2 472 aa5.63□□□□□ -1.51
ECHDC1-215ENST00000475319 ATRAIDQ6UW56 229 aa5.63□□□□□ -1.51
ECHDC1-215ENST00000475319 LRRN1Q6UXK5 716 aa5.63□□□□□ -1.51
ECHDC1-215ENST00000475319 HSDL2Q6YN16 418 aa5.63□□□□□ -1.51
ECHDC1-215ENST00000475319 COLCA1Q6ZS62 124 aa5.63□□□□□ -1.51
ECHDC1-215ENST00000475319 ANGPTL5Q86XS5 388 aa5.63□□□□□ -1.51
ECHDC1-215ENST00000475319 FAM90A1Q86YD7 464 aa5.63□□□□□ -1.51
ECHDC1-215ENST00000475319 C10orf107Q8IVU9 208 aa5.63□□□□□ -1.51
ECHDC1-215ENST00000475319 NAXDQ8IW45 347 aa5.63□□□□□ -1.51
ECHDC1-215ENST00000475319 SYNE4Q8N205 404 aa5.63□□□□□ -1.51
ECHDC1-215ENST00000475319 MINDY1Q8N5J2 469 aa5.63□□□□□ -1.51
ECHDC1-215ENST00000475319 UXS1Q8NBZ7 420 aa5.63□□□□□ -1.51
ECHDC1-215ENST00000475319 C17orf47Q8NEP4 570 aa5.63□□□□□ -1.51
ECHDC1-215ENST00000475319 OR5D18Q8NGL1 313 aa5.63□□□□□ -1.51
ECHDC1-215ENST00000475319 OR2V1Q8NHB1 315 aa5.63□□□□□ -1.51
ECHDC1-215ENST00000475319 OR14A16Q8NHC5 309 aa5.63□□□□□ -1.51
ECHDC1-215ENST00000475319 WDR20Q8TBZ3 569 aa5.63□□□□□ -1.51
ECHDC1-215ENST00000475319 CPT1CQ8TCG5 803 aa5.63□□□□□ -1.51
ECHDC1-215ENST00000475319 GRHL3Q8TE85 626 aa5.63□□□□□ -1.51
ECHDC1-215ENST00000475319 FCGR1BQ92637 280 aa5.63□□□□□ -1.51
ECHDC1-215ENST00000475319 SLC38A4Q969I6 547 aa5.63□□□□□ -1.51
ECHDC1-215ENST00000475319 KIAA1143Q96AT1 154 aaPredicted RBP5.63□□□□□ -1.51
ECHDC1-215ENST00000475319 ISG20Q96AZ6 181 aaKnown RBP5.63□□□□□ -1.51
ECHDC1-215ENST00000475319 SHISA4Q96DD7 197 aa5.63□□□□□ -1.51
ECHDC1-215ENST00000475319 TSPAN17Q96FV3 270 aa5.63□□□□□ -1.51
ECHDC1-215ENST00000475319 CENPNQ96H22 339 aaPredicted RBP5.63□□□□□ -1.51
ECHDC1-215ENST00000475319 SENP5Q96HI0 755 aaPredicted RBP5.63□□□□□ -1.51
ECHDC1-215ENST00000475319 SEPT5Q99719 369 aaPredicted RBP5.63□□□□□ -1.51
ECHDC1-215ENST00000475319 PRRT1Q99946 306 aa5.63□□□□□ -1.51
ECHDC1-215ENST00000475319 C1orf43Q9BWL3 253 aa5.63□□□□□ -1.51
ECHDC1-215ENST00000475319 DGCR6LQ9BY27 220 aa5.63□□□□□ -1.51
ECHDC1-215ENST00000475319 TM6SF2Q9BZW4 377 aa5.63□□□□□ -1.51
ECHDC1-215ENST00000475319 ARHGAP39Q9C0H5 1083 aa5.63□□□□□ -1.51
ECHDC1-215ENST00000475319 OR10A4Q9H209 315 aa5.63□□□□□ -1.51
ECHDC1-215ENST00000475319 PRDM13Q9H4Q3 707 aa5.63□□□□□ -1.51
ECHDC1-215ENST00000475319 PDZD7Q9H5P4 517 aa5.63□□□□□ -1.51
ECHDC1-215ENST00000475319 EXO5Q9H790 373 aa5.63□□□□□ -1.51
ECHDC1-215ENST00000475319 KIR3DX1Q9H7L2 352 aa5.63□□□□□ -1.51
ECHDC1-215ENST00000475319 NT5DC2Q9H857 520 aa5.63□□□□□ -1.51
ECHDC1-215ENST00000475319 NMNAT1Q9HAN9 279 aaPredicted RBP5.63□□□□□ -1.51
ECHDC1-215ENST00000475319 CCNB1IP1Q9NPC3 277 aa5.63□□□□□ -1.51
ECHDC1-215ENST00000475319 SERHLQ9NQF3 203 aa5.63□□□□□ -1.51
ECHDC1-215ENST00000475319 RNF181Q9P0P0 153 aa5.63□□□□□ -1.51
ECHDC1-215ENST00000475319 HCN3Q9P1Z3 774 aa5.63□□□□□ -1.51
ECHDC1-215ENST00000475319 STOX2Q9P2F5 926 aaPredicted RBP5.63□□□□□ -1.51
ECHDC1-215ENST00000475319 ZNF225Q9UK10 706 aa5.63□□□□□ -1.51
ECHDC1-215ENST00000475319 SHANK3Q9BYB0 1731 aa5.62□□□□□ -1.51
ECHDC1-215ENST00000475319 TRIM49BA6NDI0 452 aa5.62□□□□□ -1.51
ECHDC1-215ENST00000475319 ANKRD63C9JTQ0 380 aa5.62□□□□□ -1.51
ECHDC1-215ENST00000475319 PTGES3LE9PB15 166 aa5.62□□□□□ -1.51
ECHDC1-215ENST00000475319 NPIPB9F8W1W9 429 aa5.62□□□□□ -1.51
ECHDC1-215ENST00000475319 GTPBP1O00178 669 aaKnown RBP5.62□□□□□ -1.51
ECHDC1-215ENST00000475319 F2RL2O00254 374 aa5.62□□□□□ -1.51
ECHDC1-215ENST00000475319 HNRNPDLO14979 420 aaKnown RBP5.62□□□□□ -1.51
ECHDC1-215ENST00000475319 SCAMP2O15127 329 aaKnown RBP5.62□□□□□ -1.51
ECHDC1-215ENST00000475319 SSX4O60224 188 aa5.62□□□□□ -1.51
ECHDC1-215ENST00000475319 OR10H3O60404 316 aa5.62□□□□□ -1.51
ECHDC1-215ENST00000475319 AP2A1O95782 977 aa5.62□□□□□ -1.51
ECHDC1-215ENST00000475319 TSPAN15O95858 294 aa5.62□□□□□ -1.51
ECHDC1-215ENST00000475319 ONECUT2O95948 504 aa5.62□□□□□ -1.51
ECHDC1-215ENST00000475319 IL18BPO95998 194 aa5.62□□□□□ -1.51
ECHDC1-215ENST00000475319 CALCAP01258 141 aa5.62□□□□□ -1.51
ECHDC1-215ENST00000475319 IGHV2-5P01817 119 aa5.62□□□□□ -1.51
ECHDC1-215ENST00000475319 PIGRP01833 764 aa5.62□□□□□ -1.51
ECHDC1-215ENST00000475319 MT-ND5P03915 603 aa5.62□□□□□ -1.51
ECHDC1-215ENST00000475319 ANXA2P07355 339 aaKnown RBP5.62□□□□□ -1.51
ECHDC1-215ENST00000475319 FTH1P19P0C7X4 201 aa5.62□□□□□ -1.51
ECHDC1-215ENST00000475319 CD8BP10966 210 aa5.62□□□□□ -1.51
ECHDC1-215ENST00000475319 S100A2P29034 98 aa5.62□□□□□ -1.51
ECHDC1-215ENST00000475319 SFNP31947 248 aa5.62□□□□□ -1.51
ECHDC1-215ENST00000475319 SREBF1P36956 1147 aa5.62□□□□□ -1.51
ECHDC1-215ENST00000475319 GLRBP48167 497 aa5.62□□□□□ -1.51
ECHDC1-215ENST00000475319 GLUD2P49448 558 aa5.62□□□□□ -1.51
ECHDC1-215ENST00000475319 AFF3P51826 1226 aaKnown RBP5.62□□□□□ -1.51
ECHDC1-215ENST00000475319 CDH11P55287 796 aa5.62□□□□□ -1.51
ECHDC1-215ENST00000475319 EEFSECP57772 596 aaKnown RBP5.62□□□□□ -1.51
ECHDC1-215ENST00000475319 BTG1P62324 171 aa5.62□□□□□ -1.51
ECHDC1-215ENST00000475319 GPC5P78333 572 aa5.62□□□□□ -1.51
ECHDC1-215ENST00000475319 NHLH1Q02575 133 aa5.62□□□□□ -1.51
ECHDC1-215ENST00000475319 ELP6Q0PNE2 266 aa5.62□□□□□ -1.51
ECHDC1-215ENST00000475319 BST1Q10588 318 aa5.62□□□□□ -1.51
ECHDC1-215ENST00000475319 KLF10Q13118 480 aa5.62□□□□□ -1.51
ECHDC1-215ENST00000475319 SERTAD2Q14140 314 aa5.62□□□□□ -1.51
ECHDC1-215ENST00000475319 FASTKQ14296 549 aaKnown RBP5.62□□□□□ -1.51
ECHDC1-215ENST00000475319 PRPSAP1Q14558 356 aa5.62□□□□□ -1.51
ECHDC1-215ENST00000475319 LASP1Q14847 261 aaKnown RBP5.62□□□□□ -1.51
ECHDC1-215ENST00000475319 LARS2Q15031 903 aaKnown RBP5.62□□□□□ -1.51
ECHDC1-215ENST00000475319 EIF4HQ15056 248 aaKnown RBP5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms