RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 CA5BP1Q8WTZ4 195 aa21.91■■□□□ 1.1
CPNE1-223ENST00000475146 NUDT8Q8WV74 236 aa21.91■■□□□ 1.1
CPNE1-223ENST00000475146 PIK3R3Q92569 461 aa21.91■■□□□ 1.1
CPNE1-223ENST00000475146 SLC9A6Q92581 669 aa21.91■■□□□ 1.1
CPNE1-223ENST00000475146 RMND5BQ96G75 393 aaPredicted RBP21.91■■□□□ 1.1
CPNE1-223ENST00000475146 ZCCHC3Q9NUD5 404 aaKnown RBP21.91■■□□□ 1.1
CPNE1-223ENST00000475146 ASIC5Q9NY37 505 aa21.91■■□□□ 1.1
CPNE1-223ENST00000475146 GXYLT2A0PJZ3 443 aa21.9■■□□□ 1.1
CPNE1-223ENST00000475146 CBR3O75828 277 aa21.9■■□□□ 1.1
CPNE1-223ENST00000475146 KCNH1O95259 989 aa21.9■■□□□ 1.1
CPNE1-223ENST00000475146 FREM3P0C091 2139 aa21.9■■□□□ 1.1
CPNE1-223ENST00000475146 GABRA1P14867 456 aa21.9■■□□□ 1.1
CPNE1-223ENST00000475146 CLDN8P56748 225 aa21.9■■□□□ 1.1
CPNE1-223ENST00000475146 ZNF630Q2M218 657 aaPredicted RBP21.9■■□□□ 1.1
CPNE1-223ENST00000475146 OR5M10Q6IEU7 315 aa21.9■■□□□ 1.1
CPNE1-223ENST00000475146 NATD1Q8N6N6 113 aa21.9■■□□□ 1.1
CPNE1-223ENST00000475146 OR5P2Q8WZ92 322 aa21.9■■□□□ 1.1
CPNE1-223ENST00000475146 JADE3Q92613 823 aa21.9■■□□□ 1.1
CPNE1-223ENST00000475146 COQ8BQ96D53 544 aa21.9■■□□□ 1.1
CPNE1-223ENST00000475146 SIRT3Q9NTG7 399 aaPredicted RBP21.9■■□□□ 1.1
CPNE1-223ENST00000475146 FLRT3Q9NZU0 649 aa21.9■■□□□ 1.1
CPNE1-223ENST00000475146 NTMQ9P121 344 aa21.9■■□□□ 1.1
CPNE1-223ENST00000475146 FAM215AQ9Y5M1 114 aa21.9■■□□□ 1.1
CPNE1-223ENST00000475146 GIMAP1-GIMAP5A0A087WTJ2 511 aa21.89■■□□□ 1.09
CPNE1-223ENST00000475146 IL33O95760 270 aa21.89■■□□□ 1.09
CPNE1-223ENST00000475146 C6orf47O95873 294 aa21.89■■□□□ 1.09
CPNE1-223ENST00000475146 GCKP35557 465 aa21.89■■□□□ 1.09
CPNE1-223ENST00000475146 CRYZQ08257 329 aaKnown RBP21.89■■□□□ 1.09
CPNE1-223ENST00000475146 PGS1Q32NB8 556 aa21.89■■□□□ 1.09
CPNE1-223ENST00000475146 LSM12Q3MHD2 195 aaKnown RBP21.89■■□□□ 1.09
CPNE1-223ENST00000475146 SPDYE7PQ495Y7 208 aa21.89■■□□□ 1.09
CPNE1-223ENST00000475146 ATG16L1Q676U5 607 aa21.89■■□□□ 1.09
CPNE1-223ENST00000475146 MFSD12Q6NUT3 480 aa21.89■■□□□ 1.09
CPNE1-223ENST00000475146 TRIM42Q8IWZ5 723 aa21.89■■□□□ 1.09
CPNE1-223ENST00000475146 RIMKLAQ8IXN7 391 aa21.89■■□□□ 1.09
CPNE1-223ENST00000475146 OR10Q1Q8NGQ4 319 aa21.89■■□□□ 1.09
CPNE1-223ENST00000475146 OR14L1PQ8NHC6 308 aa21.89■■□□□ 1.09
CPNE1-223ENST00000475146 ASB5Q8WWX0 329 aa21.89■■□□□ 1.09
CPNE1-223ENST00000475146 FAM120BQ96EK7 910 aaKnown RBP21.89■■□□□ 1.09
CPNE1-223ENST00000475146 DTNBP1Q96EV8 351 aa21.89■■□□□ 1.09
CPNE1-223ENST00000475146 GIMAP5Q96F15 307 aa21.89■■□□□ 1.09
CPNE1-223ENST00000475146 TTYH2Q9BSA4 534 aa21.89■■□□□ 1.09
CPNE1-223ENST00000475146 DUSP26Q9BV47 211 aa21.89■■□□□ 1.09
CPNE1-223ENST00000475146 BHLHE41Q9C0J9 482 aaPredicted RBP21.89■■□□□ 1.09
CPNE1-223ENST00000475146 CHST11Q9NPF2 352 aa21.89■■□□□ 1.09
CPNE1-223ENST00000475146 THAP1Q9NVV9 213 aa21.89■■□□□ 1.09
CPNE1-223ENST00000475146 PPP4R1LQ9P1A2 415 aa21.89■■□□□ 1.09
CPNE1-223ENST00000475146 RNF6Q9Y252 685 aa21.89■■□□□ 1.09
CPNE1-223ENST00000475146 CFLARO15519 480 aa21.88■■□□□ 1.09
CPNE1-223ENST00000475146 NKX2-2O95096 273 aa21.88■■□□□ 1.09
CPNE1-223ENST00000475146 ALOX5P09917 674 aa21.88■■□□□ 1.09
CPNE1-223ENST00000475146 ACP2P11117 423 aa21.88■■□□□ 1.09
CPNE1-223ENST00000475146 LBPP18428 481 aa21.88■■□□□ 1.09
CPNE1-223ENST00000475146 PRIM2P49643 509 aa21.88■■□□□ 1.09
CPNE1-223ENST00000475146 DIO3P55073 304 aa21.88■■□□□ 1.09
CPNE1-223ENST00000475146 STX5Q13190 355 aa21.88■■□□□ 1.09
CPNE1-223ENST00000475146 AGBL2Q5U5Z8 902 aa21.88■■□□□ 1.09
CPNE1-223ENST00000475146 RTL6Q6ICC9 239 aa21.88■■□□□ 1.09
CPNE1-223ENST00000475146 ULK2Q8IYT8 1036 aa21.88■■□□□ 1.09
CPNE1-223ENST00000475146 OR4K17Q8NGC6 315 aa21.88■■□□□ 1.09
CPNE1-223ENST00000475146 RNF138Q8WVD3 245 aa21.88■■□□□ 1.09
CPNE1-223ENST00000475146 HOXB13Q92826 284 aaPredicted RBP21.88■■□□□ 1.09
CPNE1-223ENST00000475146 OTUB1Q96FW1 271 aaPredicted RBP21.88■■□□□ 1.09
CPNE1-223ENST00000475146 CHMP6Q96FZ7 201 aa21.88■■□□□ 1.09
CPNE1-223ENST00000475146 TIMP4Q99727 224 aa21.88■■□□□ 1.09
CPNE1-223ENST00000475146 YIPF4Q9BSR8 244 aa21.88■■□□□ 1.09
CPNE1-223ENST00000475146 MEAF6Q9HAF1 191 aa21.88■■□□□ 1.09
CPNE1-223ENST00000475146 MARCOQ9UEW3 520 aaPredicted RBP21.88■■□□□ 1.09
CPNE1-223ENST00000475146 DKKL1Q9UK85 242 aa21.88■■□□□ 1.09
CPNE1-223ENST00000475146 FBXL2Q9UKC9 423 aa21.88■■□□□ 1.09
CPNE1-223ENST00000475146 ABCG2Q9UNQ0 655 aa21.88■■□□□ 1.09
CPNE1-223ENST00000475146 UTS2O95399 124 aa21.87■■□□□ 1.09
CPNE1-223ENST00000475146 HOXD4P09016 255 aaPredicted RBP21.87■■□□□ 1.09
CPNE1-223ENST00000475146 GLI4P10075 376 aa21.87■■□□□ 1.09
CPNE1-223ENST00000475146 CHRNB4P30926 498 aa21.87■■□□□ 1.09
CPNE1-223ENST00000475146 CLK3P49761 638 aaKnown RBP21.87■■□□□ 1.09
CPNE1-223ENST00000475146 GAS1P54826 345 aa21.87■■□□□ 1.09
CPNE1-223ENST00000475146 C21orf58P58505 322 aa21.87■■□□□ 1.09
CPNE1-223ENST00000475146 DUSP5Q16690 384 aa21.87■■□□□ 1.09
CPNE1-223ENST00000475146 GALNT10Q86SR1 603 aa21.87■■□□□ 1.09
CPNE1-223ENST00000475146 CCDC71Q8IV32 467 aaPredicted RBP21.87■■□□□ 1.09
CPNE1-223ENST00000475146 SLC16A11Q8NCK7 471 aa21.87■■□□□ 1.09
CPNE1-223ENST00000475146 RAB3IL1Q8TBN0 382 aa21.87■■□□□ 1.09
CPNE1-223ENST00000475146 ABTB1Q969K4 478 aaPredicted RBP21.87■■□□□ 1.09
CPNE1-223ENST00000475146 ARL8AQ96BM9 186 aa21.87■■□□□ 1.09
CPNE1-223ENST00000475146 C16orf58Q96GQ5 468 aa21.87■■□□□ 1.09
CPNE1-223ENST00000475146 UGT2B28Q9BY64 529 aa21.87■■□□□ 1.09
CPNE1-223ENST00000475146 DPY30Q9C005 99 aa21.87■■□□□ 1.09
CPNE1-223ENST00000475146 OR2B2Q9GZK3 357 aa21.87■■□□□ 1.09
CPNE1-223ENST00000475146 CXorf36Q9H7Y0 433 aa21.87■■□□□ 1.09
CPNE1-223ENST00000475146 NEUROD4Q9HD90 331 aa21.87■■□□□ 1.09
CPNE1-223ENST00000475146 FAM120CQ9NX05 1096 aaKnown RBP21.87■■□□□ 1.09
CPNE1-223ENST00000475146 CAMK2AQ9UQM7 478 aa21.87■■□□□ 1.09
CPNE1-223ENST00000475146 PCDHGB3Q9Y5G1 929 aa21.87■■□□□ 1.09
CPNE1-223ENST00000475146 PHF3Q92576 2039 aaKnown RBP21.86■■□□□ 1.09
CPNE1-223ENST00000475146 FAM90A27PA6NNH2 459 aa21.86■■□□□ 1.09
CPNE1-223ENST00000475146 C17orf51A8MQB3 221 aa21.86■■□□□ 1.09
CPNE1-223ENST00000475146 HNRNPRO43390 633 aaKnown RBP21.86■■□□□ 1.09
CPNE1-223ENST00000475146 FADS1O60427 444 aa21.86■■□□□ 1.09
CPNE1-223ENST00000475146 SNNO75324 88 aaPredicted RBP21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms