RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-206ENST00000474871 SLCO2A1Q92959 643 aa4.57□□□□□ -1.68
NPHP3-206ENST00000474871 ZNF778Q96MU6 729 aa4.57□□□□□ -1.68
NPHP3-206ENST00000474871 APOL2Q9BQE5 337 aa4.57□□□□□ -1.68
NPHP3-206ENST00000474871 OSBPL11Q9BXB4 747 aa4.57□□□□□ -1.68
NPHP3-206ENST00000474871 NXF2Q9GZY0 626 aaKnown RBP4.57□□□□□ -1.68
NPHP3-206ENST00000474871 ANKRA2Q9H9E1 313 aa4.57□□□□□ -1.68
NPHP3-206ENST00000474871 SLC2A9Q9NRM0 540 aa4.57□□□□□ -1.68
NPHP3-206ENST00000474871 DUS2Q9NX74 493 aaKnown RBP4.57□□□□□ -1.68
NPHP3-206ENST00000474871 KLHL8Q9P2G9 620 aaPredicted RBP4.57□□□□□ -1.68
NPHP3-206ENST00000474871 ZDHHC2Q9UIJ5 367 aa4.57□□□□□ -1.68
NPHP3-206ENST00000474871 MTO1Q9Y2Z2 717 aaKnown RBP4.57□□□□□ -1.68
NPHP3-206ENST00000474871 FCF1Q9Y324 198 aaKnown RBP4.57□□□□□ -1.68
NPHP3-206ENST00000474871 OAS3Q9Y6K5 1087 aaKnown RBP4.57□□□□□ -1.68
NPHP3-206ENST00000474871 IGLV3-22A0A075B6J6 115 aa4.57□□□□□ -1.68
NPHP3-206ENST00000474871 A0A075B6Q4 140 aa4.57□□□□□ -1.68
NPHP3-206ENST00000474871 ERI2A8K979 691 aaKnown RBP4.57□□□□□ -1.68
NPHP3-206ENST00000474871 SERPINE3A8MV23 424 aa4.57□□□□□ -1.68
NPHP3-206ENST00000474871 NPIPA7E9PJI5 369 aa4.57□□□□□ -1.68
NPHP3-206ENST00000474871 RGS16O15492 202 aaPredicted RBP4.57□□□□□ -1.68
NPHP3-206ENST00000474871 ANGPTL1O95841 491 aa4.57□□□□□ -1.68
NPHP3-206ENST00000474871 ICAM1P05362 532 aa4.57□□□□□ -1.68
NPHP3-206ENST00000474871 STAG3L2P0CL84 134 aa4.57□□□□□ -1.68
NPHP3-206ENST00000474871 NPIPA8P0DM63 369 aa4.57□□□□□ -1.68
NPHP3-206ENST00000474871 GTF2E2P29084 291 aaKnown RBP4.57□□□□□ -1.68
NPHP3-206ENST00000474871 GCGRP47871 477 aa4.57□□□□□ -1.68
NPHP3-206ENST00000474871 NME5P56597 212 aa4.57□□□□□ -1.68
NPHP3-206ENST00000474871 ZNF239Q16600 458 aaKnown RBP4.57□□□□□ -1.68
NPHP3-206ENST00000474871 NDUFA9Q16795 377 aa4.57□□□□□ -1.68
NPHP3-206ENST00000474871 FASTKD1Q53R41 847 aaKnown RBP4.57□□□□□ -1.68
NPHP3-206ENST00000474871 RUNDC3AQ59EK9 446 aa4.57□□□□□ -1.68
NPHP3-206ENST00000474871 C6orf52Q5T4I8 152 aa4.57□□□□□ -1.68
NPHP3-206ENST00000474871 RGMBQ6NW40 437 aa4.57□□□□□ -1.68
NPHP3-206ENST00000474871 TMEM135Q86UB9 458 aa4.57□□□□□ -1.68
NPHP3-206ENST00000474871 OR10H4Q8NGA5 316 aa4.57□□□□□ -1.68
NPHP3-206ENST00000474871 OR56B1Q8NGI3 324 aa4.57□□□□□ -1.68
NPHP3-206ENST00000474871 TMEM186Q96B77 213 aa4.57□□□□□ -1.68
NPHP3-206ENST00000474871 CLPTM1LQ96KA5 538 aa4.57□□□□□ -1.68
NPHP3-206ENST00000474871 C4orf36Q96KX1 117 aa4.57□□□□□ -1.68
NPHP3-206ENST00000474871 SPATA9Q9BWV2 254 aa4.57□□□□□ -1.68
NPHP3-206ENST00000474871 ABHD16BQ9H3Z7 469 aa4.57□□□□□ -1.68
NPHP3-206ENST00000474871 FAM96AQ9H5X1 160 aa4.57□□□□□ -1.68
NPHP3-206ENST00000474871 CXorf36Q9H7Y0 433 aa4.57□□□□□ -1.68
NPHP3-206ENST00000474871 MED20Q9H944 212 aa4.57□□□□□ -1.68
NPHP3-206ENST00000474871 Q9N2K0 584 aa4.57□□□□□ -1.68
NPHP3-206ENST00000474871 MLXIPLQ9NP71 852 aa4.57□□□□□ -1.68
NPHP3-206ENST00000474871 WSB2Q9NYS7 404 aaPredicted RBP4.57□□□□□ -1.68
NPHP3-206ENST00000474871 CCDC59Q9P031 241 aaKnown RBP4.57□□□□□ -1.68
NPHP3-206ENST00000474871 ONECUT1Q9UBC0 465 aa4.57□□□□□ -1.68
NPHP3-206ENST00000474871 KLHL21Q9UJP4 597 aa4.57□□□□□ -1.68
NPHP3-206ENST00000474871 DBR1Q9UK59 544 aaKnown RBP4.57□□□□□ -1.68
NPHP3-206ENST00000474871 UBQLN1Q9UMX0 589 aaKnown RBP4.57□□□□□ -1.68
NPHP3-206ENST00000474871 TMEM265A0A087WTH1 108 aa4.57□□□□□ -1.68
NPHP3-206ENST00000474871 TRAV34A0A0B4J273 112 aa4.57□□□□□ -1.68
NPHP3-206ENST00000474871 ZNF99A8MXY4 864 aaPredicted RBP4.57□□□□□ -1.68
NPHP3-206ENST00000474871 EEF2KO00418 725 aaKnown RBP4.57□□□□□ -1.68
NPHP3-206ENST00000474871 EML1O00423 815 aa4.57□□□□□ -1.68
NPHP3-206ENST00000474871 MSH4O15457 936 aa4.57□□□□□ -1.68
NPHP3-206ENST00000474871 TM7SF2O76062 418 aa4.57□□□□□ -1.68
NPHP3-206ENST00000474871 OR2C1O95371 312 aa4.57□□□□□ -1.68
NPHP3-206ENST00000474871 SRPRAP08240 638 aaKnown RBP4.57□□□□□ -1.68
NPHP3-206ENST00000474871 IL6RP08887 468 aaPredicted RBP4.57□□□□□ -1.68
NPHP3-206ENST00000474871 PGAM1P18669 254 aa4.57□□□□□ -1.68
NPHP3-206ENST00000474871 IGFBP4P22692 258 aa4.57□□□□□ -1.68
NPHP3-206ENST00000474871 COILP38432 576 aaPredicted RBP4.57□□□□□ -1.68
NPHP3-206ENST00000474871 STK19P49842 368 aaPredicted RBP4.57□□□□□ -1.68
NPHP3-206ENST00000474871 ZNF155Q12901 538 aaPredicted RBP4.57□□□□□ -1.68
NPHP3-206ENST00000474871 CBFBQ13951 182 aa4.57□□□□□ -1.68
NPHP3-206ENST00000474871 CTTNQ14247 550 aaKnown RBP4.57□□□□□ -1.68
NPHP3-206ENST00000474871 NR6A1Q15406 480 aa4.57□□□□□ -1.68
NPHP3-206ENST00000474871 HIST2H2ACQ16777 129 aaPredicted RBP4.57□□□□□ -1.68
NPHP3-206ENST00000474871 ZNF181Q2M3W8 571 aa4.57□□□□□ -1.68
NPHP3-206ENST00000474871 VPS26BQ4G0F5 336 aa4.57□□□□□ -1.68
NPHP3-206ENST00000474871 TCP11X2Q5H9J9 407 aa4.57□□□□□ -1.68
NPHP3-206ENST00000474871 PRAMEF8Q5VWM4 474 aa4.57□□□□□ -1.68
NPHP3-206ENST00000474871 PRAMEF7Q5VXH5 474 aa4.57□□□□□ -1.68
NPHP3-206ENST00000474871 LINGO2Q7L985 606 aa4.57□□□□□ -1.68
NPHP3-206ENST00000474871 TRIM48Q8IWZ4 208 aa4.57□□□□□ -1.68
NPHP3-206ENST00000474871 KIAA0895Q8NCT3 520 aa4.57□□□□□ -1.68
NPHP3-206ENST00000474871 RHOXF1Q8NHV9 184 aa4.57□□□□□ -1.68
NPHP3-206ENST00000474871 RPL3LQ92901 407 aaKnown RBP4.57□□□□□ -1.68
NPHP3-206ENST00000474871 MND1Q9BWT6 205 aa4.57□□□□□ -1.68
NPHP3-206ENST00000474871 HINT2Q9BX68 163 aa4.57□□□□□ -1.68
NPHP3-206ENST00000474871 ZDHHC5Q9C0B5 715 aa4.57□□□□□ -1.68
NPHP3-206ENST00000474871 ZNF430Q9H8G1 570 aaPredicted RBP4.57□□□□□ -1.68
NPHP3-206ENST00000474871 UBE2TQ9NPD8 197 aaPredicted RBP4.57□□□□□ -1.68
NPHP3-206ENST00000474871 NGBQ9NPG2 151 aa4.57□□□□□ -1.68
NPHP3-206ENST00000474871 SLAMF7Q9NQ25 335 aa4.57□□□□□ -1.68
NPHP3-206ENST00000474871 NDE1Q9NXR1 346 aa4.57□□□□□ -1.68
NPHP3-206ENST00000474871 STUB1Q9UNE7 303 aa4.57□□□□□ -1.68
NPHP3-206ENST00000474871 YBX2Q9Y2T7 364 aaKnown RBP4.57□□□□□ -1.68
NPHP3-206ENST00000474871 A0A0G2JMZ2 1700 aa4.57□□□□□ -1.68
NPHP3-206ENST00000474871 A0A1B0GUH1 482 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 SAGE2PA6NJ88 616 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 M0QXV9 152 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 KCNK3O14649 394 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 CRYBA1P05813 215 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 CEACAM5P06731 702 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 COX4I1P13073 169 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 CD68P34810 354 aaPredicted RBP4.56□□□□□ -1.68
NPHP3-206ENST00000474871 AVPR1AP37288 418 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms