RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 ERVK-19Q9WJR5 959 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 POLR3HQ9Y535 204 aaPredicted RBP3.83□□□□□ -1.8
USP16-205ENST00000474835 NPFFR2Q9Y5X5 522 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 SMIM28A0A1B0GU29 152 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 LRIT2A6NDA9 550 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 FABP12A6NFH5 140 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 OR51F1A6NGY5 319 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 E5RI56 91 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 I3L521 148 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 DDX39AO00148 427 aaKnown RBP3.83□□□□□ -1.8
USP16-205ENST00000474835 GABRPO00591 440 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 LDLRAD4O15165 306 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 NDUFB6O95139 128 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 FABP1P07148 127 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 PPP3CBP16298 524 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 THBS4P35443 961 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 PFN3P60673 137 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 PPIAP62937 165 aaKnown RBP3.83□□□□□ -1.8
USP16-205ENST00000474835 CACNB2Q08289 660 aaPredicted RBP3.83□□□□□ -1.8
USP16-205ENST00000474835 LAPTM4AQ15012 233 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 INO80DQ53TQ3 878 aaPredicted RBP3.83□□□□□ -1.8
USP16-205ENST00000474835 COX20Q5RI15 118 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 TMEM244Q5VVB8 128 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 C3P1Q6ZMU1 363 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 FAM196AQ6ZSG2 479 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 LRRC8DQ7L1W4 858 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 C16orf62Q7Z3J2 963 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 CIR1Q86X95 450 aaPredicted RBP3.83□□□□□ -1.8
USP16-205ENST00000474835 TRIM48Q8IWZ4 208 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 CRIPAKQ8N1N5 446 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 FBXO39Q8N4B4 442 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 BPIFCQ8NFQ6 507 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 OR10G2Q8NGC3 310 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 OR52K2Q8NGK3 314 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 OR8J1Q8NGP2 316 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 BBS10Q8TAM1 723 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 ZNF721Q8TF20 911 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 GCDHQ92947 438 aaPredicted RBP3.83□□□□□ -1.8
USP16-205ENST00000474835 BHLHE41Q9C0J9 482 aaPredicted RBP3.83□□□□□ -1.8
USP16-205ENST00000474835 C20orf85Q9H1P6 137 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 C11orf1Q9H5F2 150 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 ANKRA2Q9H9E1 313 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 CERS4Q9HA82 394 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 RNF146Q9NTX7 359 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 SLC2A8Q9NY64 477 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 ZNF107Q9UII5 783 aaPredicted RBP3.83□□□□□ -1.8
USP16-205ENST00000474835 FKBPLQ9UIM3 349 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 PLCL2Q9UPR0 1127 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 SNX10Q9Y5X0 201 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 NPEPPSL1A6NEC2 478 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 PRRG1O14668 218 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 PCDH7O60245 1069 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 ZNF217O75362 1048 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 ACTL6AO96019 429 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 PDYNP01213 254 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 ZGLP1P0C6A0 271 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 ZNF8P17098 575 aaPredicted RBP3.83□□□□□ -1.8
USP16-205ENST00000474835 ARL4AP40617 200 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 VEGFCP49767 419 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 SNX16P57768 344 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 SEC61A1P61619 476 aaKnown RBP3.83□□□□□ -1.8
USP16-205ENST00000474835 SRSF11Q05519 484 aaKnown RBP3.83□□□□□ -1.8
USP16-205ENST00000474835 ADIGQ0VDE8 80 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 ELAVL2Q12926 359 aaKnown RBP3.83□□□□□ -1.8
USP16-205ENST00000474835 PPP1R8Q12972 351 aaKnown RBP3.83□□□□□ -1.8
USP16-205ENST00000474835 EML3Q32P44 896 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 SLC35D3Q5M8T2 416 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 FAM69AQ5T7M9 428 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 PRAMEF8Q5VWM4 474 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 PRAMEF7Q5VXH5 474 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 LIPNQ5VXI9 398 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 WSCD1Q658N2 575 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 C3orf33Q6P1S2 294 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 FAM111BQ6SJ93 734 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 DCXRQ7Z4W1 244 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 TECPR1Q7Z6L1 1165 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 CENPVQ7Z7K6 275 aaPredicted RBP3.83□□□□□ -1.8
USP16-205ENST00000474835 MRPL52Q86TS9 123 aaKnown RBP3.83□□□□□ -1.8
USP16-205ENST00000474835 SLC44A2Q8IWA5 706 aaPredicted RBP3.83□□□□□ -1.8
USP16-205ENST00000474835 CHST13Q8NET6 341 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 NR4A3Q92570 626 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 GJD4Q96KN9 370 aaPredicted RBP3.83□□□□□ -1.8
USP16-205ENST00000474835 C8orf37Q96NL8 207 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 THAP7Q9BT49 309 aaPredicted RBP3.83□□□□□ -1.8
USP16-205ENST00000474835 PAPOLGQ9BWT3 736 aaKnown RBP3.83□□□□□ -1.8
USP16-205ENST00000474835 BOCQ9BWV1 1114 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 BCL2L10Q9HD36 194 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.83□□□□□ -1.8
USP16-205ENST00000474835 CAMK2AQ9UQM7 478 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 TRBV4-1A0A0J9YWV2 114 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 A0A1W2PPE3 182 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 PRR19A6NJB7 356 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 M0QYT0 321 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 GPR37O15354 613 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 SLC16A5O15375 505 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 POP7O75817 140 aaKnown RBP3.82□□□□□ -1.8
USP16-205ENST00000474835 OTCP00480 354 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 APODP05090 189 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 CBSLP0DN79 551 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 SLC2A2P11168 524 aaPredicted RBP3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms