RNA–Protein interactions for RNA: ENST00000474584.5

RPGR-206, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 2

Gene RPGR, Length 2,268 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-206ENST00000474584 FAPQ12884 760 aa13.19□□□□□ -0.3
RPGR-206ENST00000474584 ZNF234Q14588 700 aa13.19□□□□□ -0.3
RPGR-206ENST00000474584 SF3A2Q15428 464 aaKnown RBP13.19□□□□□ -0.3
RPGR-206ENST00000474584 DEFB115Q30KQ5 88 aa13.19□□□□□ -0.3
RPGR-206ENST00000474584 PGGHGQ32M88 737 aa13.19□□□□□ -0.3
RPGR-206ENST00000474584 ZNF791Q3KP31 576 aaPredicted RBP13.19□□□□□ -0.3
RPGR-206ENST00000474584 PIP5KL1Q5T9C9 394 aa13.19□□□□□ -0.3
RPGR-206ENST00000474584 PAMR1Q6UXH9 720 aa13.19□□□□□ -0.3
RPGR-206ENST00000474584 PLEKHM3Q6ZWE6 761 aa13.19□□□□□ -0.3
RPGR-206ENST00000474584 YIPF7Q8N8F6 280 aa13.19□□□□□ -0.3
RPGR-206ENST00000474584 ACOT4Q8N9L9 421 aa13.19□□□□□ -0.3
RPGR-206ENST00000474584 TMEM145Q8NBT3 493 aa13.19□□□□□ -0.3
RPGR-206ENST00000474584 OR2A1Q8NGT9 310 aa13.19□□□□□ -0.3
RPGR-206ENST00000474584 OR4Q3Q8NH05 313 aa13.19□□□□□ -0.3
RPGR-206ENST00000474584 ZNF296Q8WUU4 475 aaPredicted RBP13.19□□□□□ -0.3
RPGR-206ENST00000474584 KLK6Q92876 244 aa13.19□□□□□ -0.3
RPGR-206ENST00000474584 MS4A6EQ96DS6 147 aa13.19□□□□□ -0.3
RPGR-206ENST00000474584 TRMT61BQ9BVS5 477 aaKnown RBP13.19□□□□□ -0.3
RPGR-206ENST00000474584 B3GAT2Q9NPZ5 323 aa13.19□□□□□ -0.3
RPGR-206ENST00000474584 ASB6Q9NWX5 421 aa13.19□□□□□ -0.3
RPGR-206ENST00000474584 ING3Q9NXR8 418 aa13.19□□□□□ -0.3
RPGR-206ENST00000474584 IL20Q9NYY1 176 aa13.19□□□□□ -0.3
RPGR-206ENST00000474584 GPR55Q9Y2T6 319 aaPredicted RBP13.19□□□□□ -0.3
RPGR-206ENST00000474584 ATG4BQ9Y4P1 393 aa13.19□□□□□ -0.3
RPGR-206ENST00000474584 ASB4Q9Y574 426 aa13.19□□□□□ -0.3
RPGR-206ENST00000474584 KCNE3Q9Y6H6 103 aa13.19□□□□□ -0.3
RPGR-206ENST00000474584 SNRNP200O75643 2136 aaKnown RBP13.18□□□□□ -0.3
RPGR-206ENST00000474584 LAMA3Q16787 3333 aa13.18□□□□□ -0.3
RPGR-206ENST00000474584 SGK494L7N484 410 aa13.18□□□□□ -0.3
RPGR-206ENST00000474584 ARHGEF9O43307 516 aa13.18□□□□□ -0.3
RPGR-206ENST00000474584 ORC5O43913 435 aa13.18□□□□□ -0.3
RPGR-206ENST00000474584 AIFM1O95831 613 aa13.18□□□□□ -0.3
RPGR-206ENST00000474584 C8orf89P0DMQ9 161 aa13.18□□□□□ -0.3
RPGR-206ENST00000474584 ACRP10323 421 aa13.18□□□□□ -0.3
RPGR-206ENST00000474584 HTR1FP30939 366 aa13.18□□□□□ -0.3
RPGR-206ENST00000474584 BCL6P41182 706 aa13.18□□□□□ -0.3
RPGR-206ENST00000474584 GPR4P46093 362 aa13.18□□□□□ -0.3
RPGR-206ENST00000474584 ZNF155Q12901 538 aaPredicted RBP13.18□□□□□ -0.3
RPGR-206ENST00000474584 ADAM15Q13444 863 aa13.18□□□□□ -0.3
RPGR-206ENST00000474584 DECR1Q16698 335 aa13.18□□□□□ -0.3
RPGR-206ENST00000474584 WSCD2Q2TBF2 565 aa13.18□□□□□ -0.3
RPGR-206ENST00000474584 ZNF750Q32MQ0 723 aa13.18□□□□□ -0.3
RPGR-206ENST00000474584 LIX1LQ8IVB5 337 aa13.18□□□□□ -0.3
RPGR-206ENST00000474584 NUP43Q8NFH3 380 aa13.18□□□□□ -0.3
RPGR-206ENST00000474584 NLGN4YQ8NFZ3 816 aaPredicted RBP13.18□□□□□ -0.3
RPGR-206ENST00000474584 ZFAND1Q8TCF1 268 aa13.18□□□□□ -0.3
RPGR-206ENST00000474584 DNAJA4Q8WW22 397 aaPredicted RBP13.18□□□□□ -0.3
RPGR-206ENST00000474584 SPRYD4Q8WW59 207 aaPredicted RBP13.18□□□□□ -0.3
RPGR-206ENST00000474584 JPH3Q8WXH2 748 aaPredicted RBP13.18□□□□□ -0.3
RPGR-206ENST00000474584 DCLRE1CQ96SD1 692 aaKnown RBP13.18□□□□□ -0.3
RPGR-206ENST00000474584 SECISBP2Q96T21 854 aaKnown RBP13.18□□□□□ -0.3
RPGR-206ENST00000474584 RAB11FIP5Q9BXF6 653 aa13.18□□□□□ -0.3
RPGR-206ENST00000474584 KCNN2Q9H2S1 579 aa13.18□□□□□ -0.3
RPGR-206ENST00000474584 MRPS30Q9NP92 439 aaKnown RBP13.18□□□□□ -0.3
RPGR-206ENST00000474584 ACOXLQ9NUZ1 547 aa13.18□□□□□ -0.3
RPGR-206ENST00000474584 H2AFY2Q9P0M6 372 aaPredicted RBP13.18□□□□□ -0.3
RPGR-206ENST00000474584 NLKQ9UBE8 527 aa13.18□□□□□ -0.3
RPGR-206ENST00000474584 EXOGQ9Y2C4 368 aaKnown RBP13.18□□□□□ -0.3
RPGR-206ENST00000474584 CLCA3PQ9Y6N3 262 aa13.18□□□□□ -0.3
RPGR-206ENST00000474584 CD8B2A6NJW9 211 aa13.18□□□□□ -0.3
RPGR-206ENST00000474584 CD8BP10966 210 aa13.18□□□□□ -0.3
RPGR-206ENST00000474584 GALP22466 123 aa13.18□□□□□ -0.3
RPGR-206ENST00000474584 PRKAR1BP31321 381 aa13.18□□□□□ -0.3
RPGR-206ENST00000474584 MC3RP41968 323 aa13.18□□□□□ -0.3
RPGR-206ENST00000474584 CLDN20P56880 219 aa13.18□□□□□ -0.3
RPGR-206ENST00000474584 GNG2P59768 71 aa13.18□□□□□ -0.3
RPGR-206ENST00000474584 DUSP2Q05923 314 aa13.18□□□□□ -0.3
RPGR-206ENST00000474584 EFR3AQ14156 821 aa13.18□□□□□ -0.3
RPGR-206ENST00000474584 ZIC1Q15915 447 aa13.18□□□□□ -0.3
RPGR-206ENST00000474584 SLC48A1Q6P1K1 146 aa13.18□□□□□ -0.3
RPGR-206ENST00000474584 ABHD17CQ6PCB6 329 aa13.18□□□□□ -0.3
RPGR-206ENST00000474584 SYCE2Q6PIF2 218 aa13.18□□□□□ -0.3
RPGR-206ENST00000474584 ZNF620Q6ZNG0 422 aa13.18□□□□□ -0.3
RPGR-206ENST00000474584 OR2T33Q8NG76 320 aa13.18□□□□□ -0.3
RPGR-206ENST00000474584 OR2L5Q8NG80 312 aa13.18□□□□□ -0.3
RPGR-206ENST00000474584 MACROD1Q9BQ69 325 aa13.18□□□□□ -0.3
RPGR-206ENST00000474584 HDAC8Q9BY41 377 aa13.18□□□□□ -0.3
RPGR-206ENST00000474584 XKR8Q9H6D3 395 aa13.18□□□□□ -0.3
RPGR-206ENST00000474584 NIPAL2Q9H841 368 aa13.18□□□□□ -0.3
RPGR-206ENST00000474584 KRCC1Q9NPI7 259 aaPredicted RBP13.18□□□□□ -0.3
RPGR-206ENST00000474584 IMP3Q9NV31 184 aaKnown RBP13.18□□□□□ -0.3
RPGR-206ENST00000474584 TNFRSF10DQ9UBN6 386 aa13.18□□□□□ -0.3
RPGR-206ENST00000474584 PHF11Q9UIL8 331 aa13.18□□□□□ -0.3
RPGR-206ENST00000474584 MRPS23Q9Y3D9 190 aaKnown RBP13.18□□□□□ -0.3
RPGR-206ENST00000474584 IGLON5A6NGN9 336 aa13.17□□□□□ -0.3
RPGR-206ENST00000474584 HNRNPA1P09651 372 aaKnown RBP eCLIP13.17□□□□□ -0.3
RPGR-206ENST00000474584 PRKCAP17252 672 aa13.17□□□□□ -0.3
RPGR-206ENST00000474584 ATP5A1P25705 553 aaKnown RBP13.17□□□□□ -0.3
RPGR-206ENST00000474584 TRHRP34981 398 aaPredicted RBP13.17□□□□□ -0.3
RPGR-206ENST00000474584 CLPPQ16740 277 aaPredicted RBP13.17□□□□□ -0.3
RPGR-206ENST00000474584 Q5BKY6 102 aa13.17□□□□□ -0.3
RPGR-206ENST00000474584 C1orf53Q5VUE5 145 aa13.17□□□□□ -0.3
RPGR-206ENST00000474584 MRM1Q6IN84 353 aaKnown RBP13.17□□□□□ -0.3
RPGR-206ENST00000474584 ZNF322Q6U7Q0 402 aaPredicted RBP13.17□□□□□ -0.3
RPGR-206ENST00000474584 GLCCI1Q86VQ1 547 aa13.17□□□□□ -0.3
RPGR-206ENST00000474584 PLCZ1Q86YW0 608 aa13.17□□□□□ -0.3
RPGR-206ENST00000474584 NRMQ8IXM6 262 aa13.17□□□□□ -0.3
RPGR-206ENST00000474584 ACOT12Q8WYK0 555 aa13.17□□□□□ -0.3
RPGR-206ENST00000474584 SUSD6Q92537 303 aa13.17□□□□□ -0.3
RPGR-206ENST00000474584 UPRTQ96BW1 309 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms