RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 WNT3P56703 355 aa16.32■□□□□ 0.2
UPF3A-203ENST00000474056 MPP2Q14168 576 aa16.32■□□□□ 0.2
UPF3A-203ENST00000474056 PTGR1Q14914 329 aa16.32■□□□□ 0.2
UPF3A-203ENST00000474056 DECR1Q16698 335 aa16.32■□□□□ 0.2
UPF3A-203ENST00000474056 ACSF3Q4G176 576 aaPredicted RBP16.32■□□□□ 0.2
UPF3A-203ENST00000474056 C6orf136Q5SQH8 315 aa16.32■□□□□ 0.2
UPF3A-203ENST00000474056 RIPPLY2Q5TAB7 128 aa16.32■□□□□ 0.2
UPF3A-203ENST00000474056 OR5M10Q6IEU7 315 aa16.32■□□□□ 0.2
UPF3A-203ENST00000474056 GDF7Q7Z4P5 450 aa16.32■□□□□ 0.2
UPF3A-203ENST00000474056 R3HCC1LQ7Z5L2 792 aaKnown RBP16.32■□□□□ 0.2
UPF3A-203ENST00000474056 LIX1LQ8IVB5 337 aa16.32■□□□□ 0.2
UPF3A-203ENST00000474056 ZNF295-AS1Q8N0V1 137 aa16.32■□□□□ 0.2
UPF3A-203ENST00000474056 ZNF781Q8N8C0 355 aa16.32■□□□□ 0.2
UPF3A-203ENST00000474056 FNDC5Q8NAU1 212 aa16.32■□□□□ 0.2
UPF3A-203ENST00000474056 NUP43Q8NFH3 380 aa16.32■□□□□ 0.2
UPF3A-203ENST00000474056 OR7A2PQ8NGA2 310 aa16.32■□□□□ 0.2
UPF3A-203ENST00000474056 MTERF3Q96E29 417 aa16.32■□□□□ 0.2
UPF3A-203ENST00000474056 GIMAP5Q96F15 307 aa16.32■□□□□ 0.2
UPF3A-203ENST00000474056 WDYHV1Q96HA8 205 aa16.32■□□□□ 0.2
UPF3A-203ENST00000474056 C20orf27Q9GZN8 174 aa16.32■□□□□ 0.2
UPF3A-203ENST00000474056 NPDC1Q9NQX5 325 aaPredicted RBP16.32■□□□□ 0.2
UPF3A-203ENST00000474056 ACSS1Q9NUB1 689 aaPredicted RBP16.32■□□□□ 0.2
UPF3A-203ENST00000474056 ATP6V1HQ9UI12 483 aa16.32■□□□□ 0.2
UPF3A-203ENST00000474056 CAMK2AQ9UQM7 478 aa16.32■□□□□ 0.2
UPF3A-203ENST00000474056 APCP25054 2843 aa16.31■□□□□ 0.2
UPF3A-203ENST00000474056 AHRRA9YTQ3 701 aa16.31■□□□□ 0.2
UPF3A-203ENST00000474056 BIRC5O15392 142 aa16.31■□□□□ 0.2
UPF3A-203ENST00000474056 TUBBP07437 444 aa16.31■□□□□ 0.2
UPF3A-203ENST00000474056 MSX1P28360 303 aa16.31■□□□□ 0.2
UPF3A-203ENST00000474056 SRD5A2P31213 254 aa16.31■□□□□ 0.2
UPF3A-203ENST00000474056 HPCAL1P37235 193 aa16.31■□□□□ 0.2
UPF3A-203ENST00000474056 MAP3K8P41279 467 aa16.31■□□□□ 0.2
UPF3A-203ENST00000474056 PRKAG1P54619 331 aa16.31■□□□□ 0.2
UPF3A-203ENST00000474056 ABCE1P61221 599 aaKnown RBP16.31■□□□□ 0.2
UPF3A-203ENST00000474056 MRPS22P82650 360 aaKnown RBP16.31■□□□□ 0.2
UPF3A-203ENST00000474056 PDCD2Q16342 344 aaPredicted RBP16.31■□□□□ 0.2
UPF3A-203ENST00000474056 IL23RQ5VWK5 629 aa16.31■□□□□ 0.2
UPF3A-203ENST00000474056 LRIG3Q6UXM1 1119 aa16.31■□□□□ 0.2
UPF3A-203ENST00000474056 MEX3BQ6ZN04 569 aaKnown RBP16.31■□□□□ 0.2
UPF3A-203ENST00000474056 SZRD1Q7Z422 152 aa16.31■□□□□ 0.2
UPF3A-203ENST00000474056 PM20D2Q8IYS1 436 aa16.31■□□□□ 0.2
UPF3A-203ENST00000474056 NAXEQ8NCW5 288 aa16.31■□□□□ 0.2
UPF3A-203ENST00000474056 OR14L1PQ8NHC6 308 aa16.31■□□□□ 0.2
UPF3A-203ENST00000474056 FBXO30Q8TB52 745 aa16.31■□□□□ 0.2
UPF3A-203ENST00000474056 NUDT8Q8WV74 236 aa16.31■□□□□ 0.2
UPF3A-203ENST00000474056 PIK3R3Q92569 461 aa16.31■□□□□ 0.2
UPF3A-203ENST00000474056 HOXB13Q92826 284 aaPredicted RBP16.31■□□□□ 0.2
UPF3A-203ENST00000474056 TUBGCP3Q96CW5 907 aa16.31■□□□□ 0.2
UPF3A-203ENST00000474056 SPOCK3Q9BQ16 436 aa16.31■□□□□ 0.2
UPF3A-203ENST00000474056 RTN4RQ9BZR6 473 aa16.31■□□□□ 0.2
UPF3A-203ENST00000474056 KCNK9Q9NPC2 374 aa16.31■□□□□ 0.2
UPF3A-203ENST00000474056 KCNJ16Q9NPI9 418 aa16.31■□□□□ 0.2
UPF3A-203ENST00000474056 ACTL7BQ9Y614 415 aa16.31■□□□□ 0.2
UPF3A-203ENST00000474056 FBN2P35556 2912 aa16.31■□□□□ 0.2
UPF3A-203ENST00000474056 FADS1O60427 444 aa16.3■□□□□ 0.2
UPF3A-203ENST00000474056 ZWINTO95229 277 aa16.3■□□□□ 0.2
UPF3A-203ENST00000474056 IL33O95760 270 aa16.3■□□□□ 0.2
UPF3A-203ENST00000474056 EPPINO95925 133 aa16.3■□□□□ 0.2
UPF3A-203ENST00000474056 IGKV1D-16P01601 117 aa16.3■□□□□ 0.2
UPF3A-203ENST00000474056 IGFBP2P18065 325 aa16.3■□□□□ 0.2
UPF3A-203ENST00000474056 BGNP21810 368 aa16.3■□□□□ 0.2
UPF3A-203ENST00000474056 GABRA3P34903 492 aa16.3■□□□□ 0.2
UPF3A-203ENST00000474056 TNIP2Q8NFZ5 429 aa16.3■□□□□ 0.2
UPF3A-203ENST00000474056 PGM2Q96G03 612 aa16.3■□□□□ 0.2
UPF3A-203ENST00000474056 RMND5BQ96G75 393 aaPredicted RBP16.3■□□□□ 0.2
UPF3A-203ENST00000474056 PPP1R36Q96LQ0 422 aa16.3■□□□□ 0.2
UPF3A-203ENST00000474056 MS4A4EQ96PG1 132 aa16.3■□□□□ 0.2
UPF3A-203ENST00000474056 SORT1Q99523 831 aa16.3■□□□□ 0.2
UPF3A-203ENST00000474056 TREX2Q9BQ50 279 aaPredicted RBP16.3■□□□□ 0.2
UPF3A-203ENST00000474056 SIRT3Q9NTG7 399 aaPredicted RBP16.3■□□□□ 0.2
UPF3A-203ENST00000474056 NTMQ9P121 344 aa16.3■□□□□ 0.2
UPF3A-203ENST00000474056 PPP4R1LQ9P1A2 415 aa16.3■□□□□ 0.2
UPF3A-203ENST00000474056 DKKL1Q9UK85 242 aa16.3■□□□□ 0.2
UPF3A-203ENST00000474056 TTC36A6NLP5 189 aa16.29■□□□□ 0.2
UPF3A-203ENST00000474056 FAM47E-STBD1D6RA91 191 aa16.29■□□□□ 0.2
UPF3A-203ENST00000474056 EMC8O43402 210 aa16.29■□□□□ 0.2
UPF3A-203ENST00000474056 NKX2-2O95096 273 aa16.29■□□□□ 0.2
UPF3A-203ENST00000474056 ACTL6AO96019 429 aa16.29■□□□□ 0.2
UPF3A-203ENST00000474056 ACP2P11117 423 aa16.29■□□□□ 0.2
UPF3A-203ENST00000474056 LAMP1P11279 417 aa16.29■□□□□ 0.2
UPF3A-203ENST00000474056 TCEA1P23193 301 aaKnown RBP16.29■□□□□ 0.2
UPF3A-203ENST00000474056 RPL3P39023 403 aaKnown RBP16.29■□□□□ 0.2
UPF3A-203ENST00000474056 PSMD4P55036 377 aaKnown RBP16.29■□□□□ 0.2
UPF3A-203ENST00000474056 GFRA1P56159 465 aa16.29■□□□□ 0.2
UPF3A-203ENST00000474056 STX5Q13190 355 aa16.29■□□□□ 0.2
UPF3A-203ENST00000474056 MLC1Q15049 377 aa16.29■□□□□ 0.2
UPF3A-203ENST00000474056 GALNT10Q86SR1 603 aa16.29■□□□□ 0.2
UPF3A-203ENST00000474056 CROCCP2Q86T23 111 aa16.29■□□□□ 0.2
UPF3A-203ENST00000474056 IFNEQ86WN2 208 aa16.29■□□□□ 0.2
UPF3A-203ENST00000474056 LACC1Q8IV20 430 aa16.29■□□□□ 0.2
UPF3A-203ENST00000474056 KRTCAP2Q8N6L1 136 aa16.29■□□□□ 0.2
UPF3A-203ENST00000474056 CDRT4Q8N9R6 151 aa16.29■□□□□ 0.2
UPF3A-203ENST00000474056 OR4K17Q8NGC6 315 aa16.29■□□□□ 0.2
UPF3A-203ENST00000474056 CEP70Q8NHQ1 597 aa16.29■□□□□ 0.2
UPF3A-203ENST00000474056 GPR151Q8TDV0 419 aa16.29■□□□□ 0.2
UPF3A-203ENST00000474056 SLC9A6Q92581 669 aa16.29■□□□□ 0.2
UPF3A-203ENST00000474056 FAM120BQ96EK7 910 aaKnown RBP16.29■□□□□ 0.2
UPF3A-203ENST00000474056 OTUB1Q96FW1 271 aaPredicted RBP16.29■□□□□ 0.2
UPF3A-203ENST00000474056 TRIB1Q96RU8 372 aa16.29■□□□□ 0.2
UPF3A-203ENST00000474056 DSN1Q9H410 356 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms