RNA–Protein interactions for RNA: ENST00000473420.5

CTDSP1-207, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-207ENST00000473420 MVDP53602 400 aa17.43■□□□□ 0.38
CTDSP1-207ENST00000473420 STX5Q13190 355 aa17.43■□□□□ 0.38
CTDSP1-207ENST00000473420 SNTA1Q13424 505 aa17.43■□□□□ 0.38
CTDSP1-207ENST00000473420 CYLC2Q14093 348 aaPredicted RBP17.43■□□□□ 0.38
CTDSP1-207ENST00000473420 DCST2Q5T1A1 773 aa17.43■□□□□ 0.38
CTDSP1-207ENST00000473420 DLEU7Q6UYE1 221 aa17.43■□□□□ 0.38
CTDSP1-207ENST00000473420 DHDDSQ86SQ9 333 aa17.43■□□□□ 0.38
CTDSP1-207ENST00000473420 SNX32Q86XE0 403 aa17.43■□□□□ 0.38
CTDSP1-207ENST00000473420 RNF130Q86XS8 419 aa17.43■□□□□ 0.38
CTDSP1-207ENST00000473420 SULF2Q8IWU5 870 aa17.43■□□□□ 0.38
CTDSP1-207ENST00000473420 MSRB3Q8IXL7 192 aa17.43■□□□□ 0.38
CTDSP1-207ENST00000473420 ZNF843Q8N446 348 aa17.43■□□□□ 0.38
CTDSP1-207ENST00000473420 POGLUT1Q8NBL1 392 aa17.43■□□□□ 0.38
CTDSP1-207ENST00000473420 OR52N2Q8NGI0 321 aa17.43■□□□□ 0.38
CTDSP1-207ENST00000473420 OR5M3Q8NGP4 307 aa17.43■□□□□ 0.38
CTDSP1-207ENST00000473420 RNF138Q8WVD3 245 aa17.43■□□□□ 0.38
CTDSP1-207ENST00000473420 FAM173AQ9BQD7 235 aa17.43■□□□□ 0.38
CTDSP1-207ENST00000473420 EXD2Q9NVH0 621 aa17.43■□□□□ 0.38
CTDSP1-207ENST00000473420 SLC25A37Q9NYZ2 338 aa17.43■□□□□ 0.38
CTDSP1-207ENST00000473420 SLAMF8Q9P0V8 285 aa17.43■□□□□ 0.38
CTDSP1-207ENST00000473420 LUZP4Q9P127 313 aa17.43■□□□□ 0.38
CTDSP1-207ENST00000473420 B8ZZF3 427 aa17.42■□□□□ 0.38
CTDSP1-207ENST00000473420 CLIC1O00299 241 aa17.42■□□□□ 0.38
CTDSP1-207ENST00000473420 SUV39H1O43463 412 aa17.42■□□□□ 0.38
CTDSP1-207ENST00000473420 HS6ST1O60243 411 aa17.42■□□□□ 0.38
CTDSP1-207ENST00000473420 C1QL1O75973 258 aa17.42■□□□□ 0.38
CTDSP1-207ENST00000473420 IGKV1D-16P01601 117 aa17.42■□□□□ 0.38
CTDSP1-207ENST00000473420 PRB1P04280 392 aa17.42■□□□□ 0.38
CTDSP1-207ENST00000473420 GUSBP08236 651 aa17.42■□□□□ 0.38
CTDSP1-207ENST00000473420 CYP4B1P13584 511 aa17.42■□□□□ 0.38
CTDSP1-207ENST00000473420 CASP3P42574 277 aa17.42■□□□□ 0.38
CTDSP1-207ENST00000473420 FADDQ13158 208 aa17.42■□□□□ 0.38
CTDSP1-207ENST00000473420 MMEL1Q495T6 779 aa17.42■□□□□ 0.38
CTDSP1-207ENST00000473420 ATAD3BQ5T9A4 648 aa17.42■□□□□ 0.38
CTDSP1-207ENST00000473420 HEPHL1Q6MZM0 1159 aa17.42■□□□□ 0.38
CTDSP1-207ENST00000473420 TNFAIP8L2Q6P589 184 aaPredicted RBP17.42■□□□□ 0.38
CTDSP1-207ENST00000473420 NTNG2Q96CW9 530 aa17.42■□□□□ 0.38
CTDSP1-207ENST00000473420 AURKBQ96GD4 344 aaPredicted RBP17.42■□□□□ 0.38
CTDSP1-207ENST00000473420 NODALQ96S42 347 aa17.42■□□□□ 0.38
CTDSP1-207ENST00000473420 ANGPTL4Q9BY76 406 aa17.42■□□□□ 0.38
CTDSP1-207ENST00000473420 DEPPQ9NTK1 212 aa17.42■□□□□ 0.38
CTDSP1-207ENST00000473420 THUMPD1Q9NXG2 353 aaKnown RBP17.42■□□□□ 0.38
CTDSP1-207ENST00000473420 VAPAQ9P0L0 249 aa17.42■□□□□ 0.38
CTDSP1-207ENST00000473420 ABCG2Q9UNQ0 655 aa17.42■□□□□ 0.38
CTDSP1-207ENST00000473420 CORO2BQ9UQ03 480 aa17.42■□□□□ 0.38
CTDSP1-207ENST00000473420 KCNE3Q9Y6H6 103 aa17.42■□□□□ 0.38
CTDSP1-207ENST00000473420 KALRNO60229 2985 aa17.42■□□□□ 0.38
CTDSP1-207ENST00000473420 HMGN4O00479 90 aa17.41■□□□□ 0.38
CTDSP1-207ENST00000473420 SNX4O95219 450 aa17.41■□□□□ 0.38
CTDSP1-207ENST00000473420 C1QCP02747 245 aa17.41■□□□□ 0.38
CTDSP1-207ENST00000473420 NGFRP08138 427 aa17.41■□□□□ 0.38
CTDSP1-207ENST00000473420 OR12D1P0DN82 309 aa17.41■□□□□ 0.38
CTDSP1-207ENST00000473420 COX4I1P13073 169 aa17.41■□□□□ 0.38
CTDSP1-207ENST00000473420 PRDX6P30041 224 aa17.41■□□□□ 0.38
CTDSP1-207ENST00000473420 MEOX1P50221 254 aa17.41■□□□□ 0.38
CTDSP1-207ENST00000473420 NFYCQ13952 458 aa17.41■□□□□ 0.38
CTDSP1-207ENST00000473420 TRMT5Q32P41 509 aaKnown RBP17.41■□□□□ 0.38
CTDSP1-207ENST00000473420 ARHGAP11BQ3KRB8 267 aa17.41■□□□□ 0.38
CTDSP1-207ENST00000473420 FAM91A1Q658Y4 838 aa17.41■□□□□ 0.38
CTDSP1-207ENST00000473420 REP15Q6BDI9 236 aa17.41■□□□□ 0.38
CTDSP1-207ENST00000473420 SLC30A6Q6NXT4 461 aa17.41■□□□□ 0.38
CTDSP1-207ENST00000473420 FIGNL1Q6PIW4 674 aa17.41■□□□□ 0.38
CTDSP1-207ENST00000473420 MTERF4Q7Z6M4 381 aaKnown RBP17.41■□□□□ 0.38
CTDSP1-207ENST00000473420 ZFP62Q8NB50 900 aaPredicted RBP17.41■□□□□ 0.38
CTDSP1-207ENST00000473420 PCYOX1LQ8NBM8 494 aa17.41■□□□□ 0.38
CTDSP1-207ENST00000473420 CCDC197Q8NCU1 140 aa17.41■□□□□ 0.38
CTDSP1-207ENST00000473420 OR2M7Q8NG81 312 aa17.41■□□□□ 0.38
CTDSP1-207ENST00000473420 PNPT1Q8TCS8 783 aaKnown RBP17.41■□□□□ 0.38
CTDSP1-207ENST00000473420 LRRC37BQ96QE4 947 aa17.41■□□□□ 0.38
CTDSP1-207ENST00000473420 CGREF1Q99674 301 aa17.41■□□□□ 0.38
CTDSP1-207ENST00000473420 OSBPL11Q9BXB4 747 aa17.41■□□□□ 0.38
CTDSP1-207ENST00000473420 METTL7AQ9H8H3 244 aa17.41■□□□□ 0.38
CTDSP1-207ENST00000473420 PROK2Q9HC23 129 aa17.41■□□□□ 0.38
CTDSP1-207ENST00000473420 RALYQ9UKM9 306 aaKnown RBP17.41■□□□□ 0.38
CTDSP1-207ENST00000473420 LIPT1Q9Y234 373 aa17.41■□□□□ 0.38
CTDSP1-207ENST00000473420 LOC100653049A0A140TA62 436 aa17.4■□□□□ 0.38
CTDSP1-207ENST00000473420 PRAMEF25A6NGN4 478 aa17.4■□□□□ 0.38
CTDSP1-207ENST00000473420 TTLL8A6PVC2 850 aa17.4■□□□□ 0.38
CTDSP1-207ENST00000473420 MRASO14807 208 aa17.4■□□□□ 0.38
CTDSP1-207ENST00000473420 ICOSLGO75144 302 aa17.4■□□□□ 0.38
CTDSP1-207ENST00000473420 KRT34O76011 436 aa17.4■□□□□ 0.38
CTDSP1-207ENST00000473420 UNC5CO95185 931 aa17.4■□□□□ 0.38
CTDSP1-207ENST00000473420 CRYABP02511 175 aaKnown RBP17.4■□□□□ 0.38
CTDSP1-207ENST00000473420 ATP6V1C1P21283 382 aa17.4■□□□□ 0.38
CTDSP1-207ENST00000473420 CRATP43155 626 aa17.4■□□□□ 0.38
CTDSP1-207ENST00000473420 RFX3P48380 749 aa17.4■□□□□ 0.38
CTDSP1-207ENST00000473420 CASP9P55211 416 aa17.4■□□□□ 0.38
CTDSP1-207ENST00000473420 GPR85P60893 370 aa17.4■□□□□ 0.38
CTDSP1-207ENST00000473420 KCNJ2P63252 427 aa17.4■□□□□ 0.38
CTDSP1-207ENST00000473420 RGNQ15493 299 aa17.4■□□□□ 0.38
CTDSP1-207ENST00000473420 RUNDC3AQ59EK9 446 aa17.4■□□□□ 0.38
CTDSP1-207ENST00000473420 COLEC12Q5KU26 742 aa17.4■□□□□ 0.38
CTDSP1-207ENST00000473420 COX20Q5RI15 118 aa17.4■□□□□ 0.38
CTDSP1-207ENST00000473420 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.4■□□□□ 0.38
CTDSP1-207ENST00000473420 CCNJQ5T5M9 372 aa17.4■□□□□ 0.38
CTDSP1-207ENST00000473420 PRAMEF20Q5VT98 475 aa17.4■□□□□ 0.38
CTDSP1-207ENST00000473420 AP1ARQ63HQ0 302 aa17.4■□□□□ 0.38
CTDSP1-207ENST00000473420 DESI1Q6ICB0 168 aa17.4■□□□□ 0.38
CTDSP1-207ENST00000473420 FAM180AQ6UWF9 173 aa17.4■□□□□ 0.38
CTDSP1-207ENST00000473420 C16orf62Q7Z3J2 963 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms