RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 COQ9O75208 318 aa12.01□□□□□ -0.49
TPM3-216ENST00000473036 TRIM3O75382 744 aaPredicted RBP12.01□□□□□ -0.49
TPM3-216ENST00000473036 NKX2-2O95096 273 aa12.01□□□□□ -0.49
TPM3-216ENST00000473036 HMGN2P05204 90 aaKnown RBP12.01□□□□□ -0.49
TPM3-216ENST00000473036 CELA3AP09093 270 aa12.01□□□□□ -0.49
TPM3-216ENST00000473036 NAGAP17050 411 aa12.01□□□□□ -0.49
TPM3-216ENST00000473036 NCF2P19878 526 aaPredicted RBP12.01□□□□□ -0.49
TPM3-216ENST00000473036 CASP3P42574 277 aa12.01□□□□□ -0.49
TPM3-216ENST00000473036 CDKN2CP42773 168 aa12.01□□□□□ -0.49
TPM3-216ENST00000473036 KIR3DL1P43629 444 aa12.01□□□□□ -0.49
TPM3-216ENST00000473036 MRPL19P49406 292 aaKnown RBP12.01□□□□□ -0.49
TPM3-216ENST00000473036 MAN2A2P49641 1150 aa12.01□□□□□ -0.49
TPM3-216ENST00000473036 CLNS1AP54105 237 aaKnown RBP12.01□□□□□ -0.49
TPM3-216ENST00000473036 NRG3P56975 720 aa12.01□□□□□ -0.49
TPM3-216ENST00000473036 PLCXD2Q0VAA5 305 aa12.01□□□□□ -0.49
TPM3-216ENST00000473036 DUSP5Q16690 384 aa12.01□□□□□ -0.49
TPM3-216ENST00000473036 GALNT10Q86SR1 603 aa12.01□□□□□ -0.49
TPM3-216ENST00000473036 MIER2Q8N344 545 aa12.01□□□□□ -0.49
TPM3-216ENST00000473036 GLB1L3Q8NCI6 653 aaPredicted RBP12.01□□□□□ -0.49
TPM3-216ENST00000473036 ST6GALNAC3Q8NDV1 305 aa12.01□□□□□ -0.49
TPM3-216ENST00000473036 C10orf82Q8WW14 230 aa12.01□□□□□ -0.49
TPM3-216ENST00000473036 SLC35A4Q96G79 324 aa12.01□□□□□ -0.49
TPM3-216ENST00000473036 ADOQ96SZ5 270 aa12.01□□□□□ -0.49
TPM3-216ENST00000473036 ZBTB18Q99592 522 aa12.01□□□□□ -0.49
TPM3-216ENST00000473036 SLC52A3Q9NQ40 469 aa12.01□□□□□ -0.49
TPM3-216ENST00000473036 SERHLQ9NQF3 203 aa12.01□□□□□ -0.49
TPM3-216ENST00000473036 AGPAT4Q9NRZ5 378 aa12.01□□□□□ -0.49
TPM3-216ENST00000473036 SLC6A13Q9NSD5 602 aa12.01□□□□□ -0.49
TPM3-216ENST00000473036 ATAD3AQ9NVI7 634 aa12.01□□□□□ -0.49
TPM3-216ENST00000473036 NPIPA1Q9UND3 350 aa12.01□□□□□ -0.49
TPM3-216ENST00000473036 SNX8Q9Y5X2 465 aa12.01□□□□□ -0.49
TPM3-216ENST00000473036 LIPGQ9Y5X9 500 aa12.01□□□□□ -0.49
TPM3-216ENST00000473036 PRSS51A0A1B0GVH4 220 aa12□□□□□ -0.49
TPM3-216ENST00000473036 ANKRD33BA6NCL7 494 aa12□□□□□ -0.49
TPM3-216ENST00000473036 OR6C70A6NIJ9 312 aa12□□□□□ -0.49
TPM3-216ENST00000473036 FAM166BA8MTA8 275 aa12□□□□□ -0.49
TPM3-216ENST00000473036 KLRC4-KLRK1H3BQV0 150 aa12□□□□□ -0.49
TPM3-216ENST00000473036 CRYABP02511 175 aaKnown RBP12□□□□□ -0.49
TPM3-216ENST00000473036 P04436 131 aa12□□□□□ -0.49
TPM3-216ENST00000473036 PGRP06401 933 aa12□□□□□ -0.49
TPM3-216ENST00000473036 CYP4B1P13584 511 aa12□□□□□ -0.49
TPM3-216ENST00000473036 ZNF24P17028 368 aa12□□□□□ -0.49
TPM3-216ENST00000473036 COL8A1P27658 744 aa12□□□□□ -0.49
TPM3-216ENST00000473036 GABRA3P34903 492 aa12□□□□□ -0.49
TPM3-216ENST00000473036 CCT3P49368 545 aaKnown RBP12□□□□□ -0.49
TPM3-216ENST00000473036 GAS1P54826 345 aa12□□□□□ -0.49
TPM3-216ENST00000473036 ALDH6A1Q02252 535 aaKnown RBP12□□□□□ -0.49
TPM3-216ENST00000473036 LRRC74AQ0VAA2 488 aa12□□□□□ -0.49
TPM3-216ENST00000473036 SF3A3Q12874 501 aaKnown RBP eCLIP12□□□□□ -0.49
TPM3-216ENST00000473036 SQLEQ14534 574 aa12□□□□□ -0.49
TPM3-216ENST00000473036 LASP1Q14847 261 aaKnown RBP12□□□□□ -0.49
TPM3-216ENST00000473036 MAPRE2Q15555 327 aa12□□□□□ -0.49
TPM3-216ENST00000473036 HYAL4Q2M3T9 481 aa12□□□□□ -0.49
TPM3-216ENST00000473036 DPY19L1Q2PZI1 675 aa12□□□□□ -0.49
TPM3-216ENST00000473036 APOOLQ6UXV4 268 aa12□□□□□ -0.49
TPM3-216ENST00000473036 NUP54Q7Z3B4 507 aa12□□□□□ -0.49
TPM3-216ENST00000473036 DND1Q8IYX4 353 aaKnown RBP12□□□□□ -0.49
TPM3-216ENST00000473036 TMEM251Q8N6I4 163 aa12□□□□□ -0.49
TPM3-216ENST00000473036 FAM110BQ8TC76 370 aa12□□□□□ -0.49
TPM3-216ENST00000473036 TSPEARQ8WU66 669 aa12□□□□□ -0.49
TPM3-216ENST00000473036 DIO2Q92813 273 aa12□□□□□ -0.49
TPM3-216ENST00000473036 GPR137Q96N19 417 aa12□□□□□ -0.49
TPM3-216ENST00000473036 COL21A1Q96P44 957 aa12□□□□□ -0.49
TPM3-216ENST00000473036 MS4A4EQ96PG1 132 aa12□□□□□ -0.49
TPM3-216ENST00000473036 FAM173AQ9BQD7 235 aa12□□□□□ -0.49
TPM3-216ENST00000473036 ANGPTL4Q9BY76 406 aa12□□□□□ -0.49
TPM3-216ENST00000473036 ZNF385DQ9H6B1 395 aa12□□□□□ -0.49
TPM3-216ENST00000473036 ZDHHC11Q9H8X9 412 aa12□□□□□ -0.49
TPM3-216ENST00000473036 GALNT9Q9HCQ5 603 aa12□□□□□ -0.49
TPM3-216ENST00000473036 ZCCHC3Q9NUD5 404 aaKnown RBP12□□□□□ -0.49
TPM3-216ENST00000473036 ZIM2Q9NZV7 527 aa12□□□□□ -0.49
TPM3-216ENST00000473036 CNIH4Q9P003 139 aa12□□□□□ -0.49
TPM3-216ENST00000473036 CBLCQ9ULV8 474 aa12□□□□□ -0.49
TPM3-216ENST00000473036 SEC23IPQ9Y6Y8 1000 aaKnown RBP12□□□□□ -0.49
TPM3-216ENST00000473036 C2CD3Q4AC94 2353 aa12□□□□□ -0.49
TPM3-216ENST00000473036 MYO7BQ6PIF6 2116 aa11.99□□□□□ -0.49
TPM3-216ENST00000473036 DIDO1Q9BTC0 2240 aaKnown RBP11.99□□□□□ -0.49
TPM3-216ENST00000473036 PCNX1Q96RV3 2341 aa11.99□□□□□ -0.49
TPM3-216ENST00000473036 FADS1O60427 444 aa11.99□□□□□ -0.49
TPM3-216ENST00000473036 ICOSLGO75144 302 aa11.99□□□□□ -0.49
TPM3-216ENST00000473036 REM1O75628 298 aa11.99□□□□□ -0.49
TPM3-216ENST00000473036 SLC22A3O75751 556 aa11.99□□□□□ -0.49
TPM3-216ENST00000473036 UNC5CO95185 931 aa11.99□□□□□ -0.49
TPM3-216ENST00000473036 CPSF4O95639 269 aaKnown RBP11.99□□□□□ -0.49
TPM3-216ENST00000473036 PTPN6P29350 595 aa11.99□□□□□ -0.49
TPM3-216ENST00000473036 MAGEA5P43359 124 aa11.99□□□□□ -0.49
TPM3-216ENST00000473036 MNAT1P51948 309 aa11.99□□□□□ -0.49
TPM3-216ENST00000473036 CASP9P55211 416 aa11.99□□□□□ -0.49
TPM3-216ENST00000473036 RPS26P62854 115 aaKnown RBP11.99□□□□□ -0.49
TPM3-216ENST00000473036 PPIAP62937 165 aaKnown RBP11.99□□□□□ -0.49
TPM3-216ENST00000473036 MRPS22P82650 360 aaKnown RBP11.99□□□□□ -0.49
TPM3-216ENST00000473036 TMEM81Q6P7N7 255 aa11.99□□□□□ -0.49
TPM3-216ENST00000473036 SZRD1Q7Z422 152 aa11.99□□□□□ -0.49
TPM3-216ENST00000473036 WDSUB1Q8N9V3 476 aa11.99□□□□□ -0.49
TPM3-216ENST00000473036 POGLUT1Q8NBL1 392 aa11.99□□□□□ -0.49
TPM3-216ENST00000473036 VPS37AQ8NEZ2 397 aa11.99□□□□□ -0.49
TPM3-216ENST00000473036 OR4A15Q8NGL6 344 aa11.99□□□□□ -0.49
TPM3-216ENST00000473036 GOT1L1Q8NHS2 421 aaPredicted RBP11.99□□□□□ -0.49
TPM3-216ENST00000473036 SFXN5Q8TD22 340 aa11.99□□□□□ -0.49
TPM3-216ENST00000473036 SLC9A6Q92581 669 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms