RNA–Protein interactions for RNA: ENST00000472880.1

COL9A3-210, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 959 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-210ENST00000472880 ABCG2Q9UNQ0 655 aa17.89■□□□□ 0.45
COL9A3-210ENST00000472880 A0A1W2PNV4 684 aa17.88■□□□□ 0.45
COL9A3-210ENST00000472880 ZIC3O60481 467 aa17.88■□□□□ 0.45
COL9A3-210ENST00000472880 ATE1O95260 518 aa17.88■□□□□ 0.45
COL9A3-210ENST00000472880 NAA20P61599 178 aa17.88■□□□□ 0.45
COL9A3-210ENST00000472880 STX5Q13190 355 aa17.88■□□□□ 0.45
COL9A3-210ENST00000472880 SLC29A2Q14542 456 aa17.88■□□□□ 0.45
COL9A3-210ENST00000472880 POU4F3Q15319 338 aa17.88■□□□□ 0.45
COL9A3-210ENST00000472880 ZNHIT3Q15649 155 aaPredicted RBP17.88■□□□□ 0.45
COL9A3-210ENST00000472880 BCL2A1Q16548 175 aa17.88■□□□□ 0.45
COL9A3-210ENST00000472880 DEFB113Q30KQ7 82 aa17.88■□□□□ 0.45
COL9A3-210ENST00000472880 RAET1LQ5VY80 246 aa17.88■□□□□ 0.45
COL9A3-210ENST00000472880 ZYG11AQ6WRX3 759 aa17.88■□□□□ 0.45
COL9A3-210ENST00000472880 UBQLNLQ8IYU4 475 aa17.88■□□□□ 0.45
COL9A3-210ENST00000472880 DSN1Q9H410 356 aa17.88■□□□□ 0.45
COL9A3-210ENST00000472880 Q9N2J8 555 aa17.88■□□□□ 0.45
COL9A3-210ENST00000472880 MYNNQ9NPC7 610 aa17.88■□□□□ 0.45
COL9A3-210ENST00000472880 SDHAF3Q9NRP4 125 aa17.88■□□□□ 0.45
COL9A3-210ENST00000472880 C19orf53Q9UNZ5 99 aaPredicted RBP17.88■□□□□ 0.45
COL9A3-210ENST00000472880 POLR3HQ9Y535 204 aaPredicted RBP17.88■□□□□ 0.45
COL9A3-210ENST00000472880 NF1P21359 2839 aa17.88■□□□□ 0.45
COL9A3-210ENST00000472880 SLC22A20A6NK97 555 aa17.87■□□□□ 0.45
COL9A3-210ENST00000472880 C17orf51A8MQB3 221 aa17.87■□□□□ 0.45
COL9A3-210ENST00000472880 B4DXG7 233 aa17.87■□□□□ 0.45
COL9A3-210ENST00000472880 H3BQF6 201 aa17.87■□□□□ 0.45
COL9A3-210ENST00000472880 UBFD1O14562 309 aaKnown RBP17.87■□□□□ 0.45
COL9A3-210ENST00000472880 CASKO14936 926 aa17.87■□□□□ 0.45
COL9A3-210ENST00000472880 TGM6O95932 706 aa17.87■□□□□ 0.45
COL9A3-210ENST00000472880 FAM153BP0C7A2 387 aa17.87■□□□□ 0.45
COL9A3-210ENST00000472880 PEPDP12955 493 aa17.87■□□□□ 0.45
COL9A3-210ENST00000472880 HK1P19367 917 aa17.87■□□□□ 0.45
COL9A3-210ENST00000472880 GANABQ14697 944 aaKnown RBP17.87■□□□□ 0.45
COL9A3-210ENST00000472880 DECR1Q16698 335 aa17.87■□□□□ 0.45
COL9A3-210ENST00000472880 FAM153CQ494X1 144 aa17.87■□□□□ 0.45
COL9A3-210ENST00000472880 CYP27C1Q4G0S4 372 aa17.87■□□□□ 0.45
COL9A3-210ENST00000472880 OR2A2Q6IF42 318 aa17.87■□□□□ 0.45
COL9A3-210ENST00000472880 FAM71E1Q6IPT2 247 aa17.87■□□□□ 0.45
COL9A3-210ENST00000472880 FRMD7Q6ZUT3 714 aa17.87■□□□□ 0.45
COL9A3-210ENST00000472880 MEIOBQ8N635 442 aa17.87■□□□□ 0.45
COL9A3-210ENST00000472880 FADS6Q8N9I5 356 aa17.87■□□□□ 0.45
COL9A3-210ENST00000472880 OR2M3Q8NG83 312 aa17.87■□□□□ 0.45
COL9A3-210ENST00000472880 FAM76AQ8TAV0 307 aa17.87■□□□□ 0.45
COL9A3-210ENST00000472880 MZB1Q8WU39 189 aa17.87■□□□□ 0.45
COL9A3-210ENST00000472880 PLEKHF2Q9H8W4 249 aa17.87■□□□□ 0.45
COL9A3-210ENST00000472880 RRAGDQ9NQL2 400 aaPredicted RBP17.87■□□□□ 0.45
COL9A3-210ENST00000472880 NDRG3Q9UGV2 375 aa17.87■□□□□ 0.45
COL9A3-210ENST00000472880 MRTO4Q9UKD2 239 aaKnown RBP17.87■□□□□ 0.45
COL9A3-210ENST00000472880 EMCNQ9ULC0 261 aa17.87■□□□□ 0.45
COL9A3-210ENST00000472880 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.86■□□□□ 0.45
COL9A3-210ENST00000472880 A8MXE2 369 aa17.86■□□□□ 0.45
COL9A3-210ENST00000472880 G3V2L1 256 aa17.86■□□□□ 0.45
COL9A3-210ENST00000472880 TNFSF13O75888 250 aa17.86■□□□□ 0.45
COL9A3-210ENST00000472880 SMNDC1O75940 238 aaKnown RBP eCLIP17.86■□□□□ 0.453e-6■■■■□ 26.7
COL9A3-210ENST00000472880 RSL1D1O76021 490 aaKnown RBP17.86■□□□□ 0.45
COL9A3-210ENST00000472880 HRGP04196 525 aa17.86■□□□□ 0.45
COL9A3-210ENST00000472880 CRHP06850 196 aa17.86■□□□□ 0.45
COL9A3-210ENST00000472880 CLK3P49761 638 aaKnown RBP17.86■□□□□ 0.45
COL9A3-210ENST00000472880 PSMD4P55036 377 aaKnown RBP17.86■□□□□ 0.45
COL9A3-210ENST00000472880 B3GALT5-AS1P59052 145 aa17.86■□□□□ 0.45
COL9A3-210ENST00000472880 PRSS53Q2L4Q9 553 aa17.86■□□□□ 0.45
COL9A3-210ENST00000472880 CFAP157Q5JU67 520 aa17.86■□□□□ 0.45
COL9A3-210ENST00000472880 IKBIPQ70UQ0 350 aa17.86■□□□□ 0.45
COL9A3-210ENST00000472880 GSPT2Q8IYD1 628 aaKnown RBP17.86■□□□□ 0.45
COL9A3-210ENST00000472880 OR2L13Q8N349 312 aa17.86■□□□□ 0.45
COL9A3-210ENST00000472880 CNEP1R1Q8N9A8 125 aa17.86■□□□□ 0.45
COL9A3-210ENST00000472880 SMPDL3BQ92485 455 aa17.86■□□□□ 0.45
COL9A3-210ENST00000472880 TXLNGYQ9BZA5 131 aa17.86■□□□□ 0.45
COL9A3-210ENST00000472880 GLIPR2Q9H4G4 154 aa17.86■□□□□ 0.45
COL9A3-210ENST00000472880 PTGES2Q9H7Z7 377 aa17.86■□□□□ 0.45
COL9A3-210ENST00000472880 TAS2R7Q9NYW3 318 aa17.86■□□□□ 0.45
COL9A3-210ENST00000472880 EIF3LQ9Y262 564 aaKnown RBP17.86■□□□□ 0.45
COL9A3-210ENST00000472880 WBP11Q9Y2W2 641 aaKnown RBP17.86■□□□□ 0.45
COL9A3-210ENST00000472880 UPK1AO00322 258 aa17.85■□□□□ 0.45
COL9A3-210ENST00000472880 MSTNO14793 375 aa17.85■□□□□ 0.45
COL9A3-210ENST00000472880 FADS1O60427 444 aa17.85■□□□□ 0.45
COL9A3-210ENST00000472880 PSMG1O95456 288 aa17.85■□□□□ 0.45
COL9A3-210ENST00000472880 RFX3P48380 749 aa17.85■□□□□ 0.45
COL9A3-210ENST00000472880 EEFSECP57772 596 aaKnown RBP17.85■□□□□ 0.45
COL9A3-210ENST00000472880 ADAM8P78325 824 aa17.85■□□□□ 0.45
COL9A3-210ENST00000472880 KRTAP21-3Q3LHN1 58 aa17.85■□□□□ 0.45
COL9A3-210ENST00000472880 TRIM46Q7Z4K8 759 aa17.85■□□□□ 0.45
COL9A3-210ENST00000472880 EIF1ADQ8N9N8 165 aaKnown RBP17.85■□□□□ 0.45
COL9A3-210ENST00000472880 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.85■□□□□ 0.45
COL9A3-210ENST00000472880 POM121Q96HA1 1249 aa17.85■□□□□ 0.45
COL9A3-210ENST00000472880 AMDHD1Q96NU7 426 aa17.85■□□□□ 0.45
COL9A3-210ENST00000472880 FAM120CQ9NX05 1096 aaKnown RBP17.85■□□□□ 0.45
COL9A3-210ENST00000472880 FLRT3Q9NZU0 649 aa17.85■□□□□ 0.45
COL9A3-210ENST00000472880 MED11Q9P086 117 aa17.85■□□□□ 0.45
COL9A3-210ENST00000472880 TESMINQ9Y4I5 508 aa17.85■□□□□ 0.45
COL9A3-210ENST00000472880 MED12LQ86YW9 2145 aa17.84■□□□□ 0.45
COL9A3-210ENST00000472880 MPDZO75970 2070 aa17.84■□□□□ 0.45
COL9A3-210ENST00000472880 A0A1W2PPM1 405 aa17.84■□□□□ 0.45
COL9A3-210ENST00000472880 H3BML4 177 aa17.84■□□□□ 0.45
COL9A3-210ENST00000472880 SEC14L5O43304 696 aa17.84■□□□□ 0.45
COL9A3-210ENST00000472880 IL33O95760 270 aa17.84■□□□□ 0.45
COL9A3-210ENST00000472880 PROCP04070 461 aa17.84■□□□□ 0.45
COL9A3-210ENST00000472880 CCDC153Q494R4 210 aa17.84■□□□□ 0.45
COL9A3-210ENST00000472880 NOXRED1Q6NXP6 359 aa17.84■□□□□ 0.45
COL9A3-210ENST00000472880 VWA1Q6PCB0 445 aa17.84■□□□□ 0.45
COL9A3-210ENST00000472880 CCDC63Q8NA47 563 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms