RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 CTAGE3PQ8IX95 158 aa8.36□□□□□ -1.07
VCL-204ENST00000472585 PPM1NQ8N819 430 aa8.36□□□□□ -1.07
VCL-204ENST00000472585 ZNF611Q8N823 705 aa8.36□□□□□ -1.07
VCL-204ENST00000472585 OR2M3Q8NG83 312 aa8.36□□□□□ -1.07
VCL-204ENST00000472585 RHEBL1Q8TAI7 183 aa8.36□□□□□ -1.07
VCL-204ENST00000472585 RAB3IL1Q8TBN0 382 aa8.36□□□□□ -1.07
VCL-204ENST00000472585 TRPC4APQ8TEL6 797 aa8.36□□□□□ -1.07
VCL-204ENST00000472585 KAT2AQ92830 837 aa8.36□□□□□ -1.07
VCL-204ENST00000472585 NEUROG1Q92886 237 aa8.36□□□□□ -1.07
VCL-204ENST00000472585 EFHD2Q96C19 240 aaPredicted RBP8.36□□□□□ -1.07
VCL-204ENST00000472585 ITPKCQ96DU7 683 aa8.36□□□□□ -1.07
VCL-204ENST00000472585 VSTM2LQ96N03 204 aa8.36□□□□□ -1.07
VCL-204ENST00000472585 FRG2BQ96QU4 278 aa8.36□□□□□ -1.07
VCL-204ENST00000472585 SERPINI1Q99574 410 aa8.36□□□□□ -1.07
VCL-204ENST00000472585 NPAS1Q99742 590 aa8.36□□□□□ -1.07
VCL-204ENST00000472585 PINK1Q9BXM7 581 aa8.36□□□□□ -1.07
VCL-204ENST00000472585 SHARPINQ9H0F6 387 aa8.36□□□□□ -1.07
VCL-204ENST00000472585 ZFAND3Q9H8U3 227 aa8.36□□□□□ -1.07
VCL-204ENST00000472585 GRHL1Q9NZI5 618 aa8.36□□□□□ -1.07
VCL-204ENST00000472585 MED11Q9P086 117 aa8.36□□□□□ -1.07
VCL-204ENST00000472585 LPAR3Q9UBY5 353 aa8.36□□□□□ -1.07
VCL-204ENST00000472585 ZNF225Q9UK10 706 aa8.36□□□□□ -1.07
VCL-204ENST00000472585 ADAM29Q9UKF5 820 aa8.36□□□□□ -1.07
VCL-204ENST00000472585 ANGPTL3Q9Y5C1 460 aa8.36□□□□□ -1.07
VCL-204ENST00000472585 PCNX3Q9H6A9 2034 aa8.36□□□□□ -1.07
VCL-204ENST00000472585 UQCRHLA0A096LP55 91 aa8.35□□□□□ -1.07
VCL-204ENST00000472585 C1orf226A1L170 272 aa8.35□□□□□ -1.07
VCL-204ENST00000472585 OR2M5A3KFT3 312 aa8.35□□□□□ -1.07
VCL-204ENST00000472585 GOLGA6L6A8MZA4 724 aa8.35□□□□□ -1.07
VCL-204ENST00000472585 FADS1O60427 444 aa8.35□□□□□ -1.07
VCL-204ENST00000472585 TNFRSF21O75509 655 aa8.35□□□□□ -1.07
VCL-204ENST00000472585 SOD3P08294 240 aa8.35□□□□□ -1.07
VCL-204ENST00000472585 PEPDP12955 493 aa8.35□□□□□ -1.07
VCL-204ENST00000472585 CSNK2A2P19784 350 aaPredicted RBP8.35□□□□□ -1.07
VCL-204ENST00000472585 CRABP2P29373 138 aa8.35□□□□□ -1.07
VCL-204ENST00000472585 THBS2P35442 1172 aa8.35□□□□□ -1.07
VCL-204ENST00000472585 ACVR1BP36896 505 aa8.35□□□□□ -1.07
VCL-204ENST00000472585 MAPK12P53778 367 aa8.35□□□□□ -1.07
VCL-204ENST00000472585 GUCY2DQ02846 1103 aa8.35□□□□□ -1.07
VCL-204ENST00000472585 SLMAPQ14BN4 828 aa8.35□□□□□ -1.07
VCL-204ENST00000472585 PON3Q15166 354 aa8.35□□□□□ -1.07
VCL-204ENST00000472585 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.35□□□□□ -1.07
VCL-204ENST00000472585 EXOC3L2Q2M3D2 409 aa8.35□□□□□ -1.07
VCL-204ENST00000472585 C6orf52Q5T4I8 152 aa8.35□□□□□ -1.07
VCL-204ENST00000472585 DNM1P46Q6ZS02 220 aa8.35□□□□□ -1.07
VCL-204ENST00000472585 MILR1Q7Z6M3 343 aa8.35□□□□□ -1.07
VCL-204ENST00000472585 TBC1D1Q86TI0 1168 aaPredicted RBP8.35□□□□□ -1.07
VCL-204ENST00000472585 ATG4DQ86TL0 474 aaPredicted RBP8.35□□□□□ -1.07
VCL-204ENST00000472585 CAVIN3Q969G5 261 aa8.35□□□□□ -1.07
VCL-204ENST00000472585 REPS1Q96D71 796 aa8.35□□□□□ -1.07
VCL-204ENST00000472585 TMCO6Q96DC7 493 aa8.35□□□□□ -1.07
VCL-204ENST00000472585 PLPPR2Q96GM1 343 aa8.35□□□□□ -1.07
VCL-204ENST00000472585 BTBD9Q96Q07 612 aa8.35□□□□□ -1.07
VCL-204ENST00000472585 KLHDC3Q9BQ90 382 aa8.35□□□□□ -1.07
VCL-204ENST00000472585 LRRC1Q9BTT6 524 aa8.35□□□□□ -1.07
VCL-204ENST00000472585 NTMT1Q9BV86 223 aa8.35□□□□□ -1.07
VCL-204ENST00000472585 DPH5Q9H2P9 285 aa8.35□□□□□ -1.07
VCL-204ENST00000472585 PLSCR4Q9NRQ2 329 aa8.35□□□□□ -1.07
VCL-204ENST00000472585 PGPEP1Q9NXJ5 209 aa8.35□□□□□ -1.07
VCL-204ENST00000472585 CLEC4AQ9UMR7 237 aa8.35□□□□□ -1.07
VCL-204ENST00000472585 TGP01266 2768 aa8.35□□□□□ -1.07
VCL-204ENST00000472585 MEGF8Q7Z7M0 2845 aa8.35□□□□□ -1.07
VCL-204ENST00000472585 FREM1Q5H8C1 2179 aa8.34□□□□□ -1.07
VCL-204ENST00000472585 YLPM1P49750 1951 aaKnown RBP8.34□□□□□ -1.07
VCL-204ENST00000472585 SEC14L5O43304 696 aa8.34□□□□□ -1.07
VCL-204ENST00000472585 GPRIN2O60269 458 aa8.34□□□□□ -1.07
VCL-204ENST00000472585 NTN1O95631 604 aa8.34□□□□□ -1.07
VCL-204ENST00000472585 PDYNP01213 254 aa8.34□□□□□ -1.07
VCL-204ENST00000472585 ALDOAP04075 364 aaKnown RBP8.34□□□□□ -1.07
VCL-204ENST00000472585 DANCRP0C864 163 aa8.34□□□□□ -1.07
VCL-204ENST00000472585 GFAPP14136 432 aa8.34□□□□□ -1.07
VCL-204ENST00000472585 CHN1P15882 459 aa8.34□□□□□ -1.07
VCL-204ENST00000472585 TSPAN8P19075 237 aa8.34□□□□□ -1.07
VCL-204ENST00000472585 HK1P19367 917 aa8.34□□□□□ -1.07
VCL-204ENST00000472585 PNLIPRP2P54317 469 aa8.34□□□□□ -1.07
VCL-204ENST00000472585 DSCR4P56555 118 aaPredicted RBP8.34□□□□□ -1.07
VCL-204ENST00000472585 RAE1P78406 368 aaKnown RBP8.34□□□□□ -1.07
VCL-204ENST00000472585 PSG6Q00889 435 aa8.34□□□□□ -1.07
VCL-204ENST00000472585 ZNF844Q08AG5 666 aa8.34□□□□□ -1.07
VCL-204ENST00000472585 ILF2Q12905 390 aaKnown RBP8.34□□□□□ -1.07
VCL-204ENST00000472585 ACAP2Q15057 778 aa8.34□□□□□ -1.07
VCL-204ENST00000472585 TMEM44Q2T9K0 475 aa8.34□□□□□ -1.07
VCL-204ENST00000472585 CTU2Q2VPK5 515 aaKnown RBP8.34□□□□□ -1.07
VCL-204ENST00000472585 TCHHL1Q5QJ38 904 aaPredicted RBP8.34□□□□□ -1.07
VCL-204ENST00000472585 MROH9Q5TGP6 573 aa8.34□□□□□ -1.07
VCL-204ENST00000472585 LIPNQ5VXI9 398 aa8.34□□□□□ -1.07
VCL-204ENST00000472585 APOOLQ6UXV4 268 aa8.34□□□□□ -1.07
VCL-204ENST00000472585 LARP4Q71RC2 724 aaKnown RBP eCLIP8.34□□□□□ -1.07
VCL-204ENST00000472585 FAM214BQ7L5A3 538 aa8.34□□□□□ -1.07
VCL-204ENST00000472585 GGNQ86UU5 652 aa8.34□□□□□ -1.07
VCL-204ENST00000472585 PTGR2Q8N8N7 351 aaPredicted RBP8.34□□□□□ -1.07
VCL-204ENST00000472585 OR7G2Q8NG99 324 aa8.34□□□□□ -1.07
VCL-204ENST00000472585 OR4F6Q8NGB9 312 aa8.34□□□□□ -1.07
VCL-204ENST00000472585 OR9A2Q8NGT5 310 aa8.34□□□□□ -1.07
VCL-204ENST00000472585 ZNF675Q8TD23 568 aa8.34□□□□□ -1.07
VCL-204ENST00000472585 FBF1Q8TES7 1133 aa8.34□□□□□ -1.07
VCL-204ENST00000472585 ROBO4Q8WZ75 1007 aa8.34□□□□□ -1.07
VCL-204ENST00000472585 AKAP1Q92667 903 aaKnown RBP eCLIP8.34□□□□□ -1.07
VCL-204ENST00000472585 CDKL2Q92772 493 aa8.34□□□□□ -1.07
VCL-204ENST00000472585 KLHL29Q96CT2 875 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms