RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 RFX3P48380 749 aa7.3□□□□□ -1.24
USP48-207ENST00000471752 NCBP2P52298 156 aaKnown RBP eCLIP7.3□□□□□ -1.24
USP48-207ENST00000471752 DGKQP52824 942 aa7.3□□□□□ -1.24
USP48-207ENST00000471752 FOXD4Q12950 439 aaPredicted RBP7.3□□□□□ -1.24
USP48-207ENST00000471752 DAZAP2Q15038 168 aaPredicted RBP7.3□□□□□ -1.24
USP48-207ENST00000471752 FBXL19-AS1Q494R0 122 aa7.3□□□□□ -1.24
USP48-207ENST00000471752 FLYWCH1Q4VC44 716 aa7.3□□□□□ -1.24
USP48-207ENST00000471752 ANKRD34AQ69YU3 496 aa7.3□□□□□ -1.24
USP48-207ENST00000471752 NOXRED1Q6NXP6 359 aa7.3□□□□□ -1.24
USP48-207ENST00000471752 TMEM81Q6P7N7 255 aa7.3□□□□□ -1.24
USP48-207ENST00000471752 ZNF474Q6S9Z5 364 aaPredicted RBP7.3□□□□□ -1.24
USP48-207ENST00000471752 ZYG11AQ6WRX3 759 aa7.3□□□□□ -1.24
USP48-207ENST00000471752 TAOK1Q7L7X3 1001 aa7.3□□□□□ -1.24
USP48-207ENST00000471752 BTLAQ7Z6A9 289 aa7.3□□□□□ -1.24
USP48-207ENST00000471752 C10orf107Q8IVU9 208 aa7.3□□□□□ -1.24
USP48-207ENST00000471752 IFT20Q8IY31 132 aa7.3□□□□□ -1.24
USP48-207ENST00000471752 UBQLNLQ8IYU4 475 aa7.3□□□□□ -1.24
USP48-207ENST00000471752 C7orf57Q8NEG2 295 aa7.3□□□□□ -1.24
USP48-207ENST00000471752 MNS1Q8NEH6 495 aa7.3□□□□□ -1.24
USP48-207ENST00000471752 OR2M3Q8NG83 312 aa7.3□□□□□ -1.24
USP48-207ENST00000471752 ELP4Q96EB1 424 aa7.3□□□□□ -1.24
USP48-207ENST00000471752 AMDHD1Q96NU7 426 aa7.3□□□□□ -1.24
USP48-207ENST00000471752 BBS4Q96RK4 519 aa7.3□□□□□ -1.24
USP48-207ENST00000471752 FAIM2Q9BWQ8 316 aa7.3□□□□□ -1.24
USP48-207ENST00000471752 GATA5Q9BWX5 397 aaPredicted RBP7.3□□□□□ -1.24
USP48-207ENST00000471752 OPN3Q9H1Y3 402 aaPredicted RBP7.3□□□□□ -1.24
USP48-207ENST00000471752 CXXC4Q9H2H0 198 aa7.3□□□□□ -1.24
USP48-207ENST00000471752 OXSMQ9NWU1 459 aa7.3□□□□□ -1.24
USP48-207ENST00000471752 GALNT8Q9NY28 637 aa7.3□□□□□ -1.24
USP48-207ENST00000471752 PSMC3IPQ9P2W1 217 aaPredicted RBP7.3□□□□□ -1.24
USP48-207ENST00000471752 PSME2Q9UL46 239 aa7.3□□□□□ -1.24
USP48-207ENST00000471752 C19orf53Q9UNZ5 99 aaPredicted RBP7.3□□□□□ -1.24
USP48-207ENST00000471752 FIS1Q9Y3D6 152 aa7.3□□□□□ -1.24
USP48-207ENST00000471752 MED12LQ86YW9 2145 aa7.3□□□□□ -1.24
USP48-207ENST00000471752 ARHGAP21Q5T5U3 1957 aa7.29□□□□□ -1.24
USP48-207ENST00000471752 EXPH5Q8NEV8 1989 aa7.29□□□□□ -1.24
USP48-207ENST00000471752 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.29□□□□□ -1.24
USP48-207ENST00000471752 A0A1W2PNV4 684 aa7.29□□□□□ -1.24
USP48-207ENST00000471752 SERTM1A2A2V5 107 aa7.29□□□□□ -1.24
USP48-207ENST00000471752 TUBAL3A6NHL2 446 aa7.29□□□□□ -1.24
USP48-207ENST00000471752 NPIPB8E9PQR5 432 aa7.29□□□□□ -1.24
USP48-207ENST00000471752 H0Y3Z8 333 aa7.29□□□□□ -1.24
USP48-207ENST00000471752 EFNA2O43921 213 aa7.29□□□□□ -1.24
USP48-207ENST00000471752 GUCY1B2O75343 617 aa7.29□□□□□ -1.24
USP48-207ENST00000471752 SEC22BO75396 215 aa7.29□□□□□ -1.24
USP48-207ENST00000471752 AQP8O94778 261 aa7.29□□□□□ -1.24
USP48-207ENST00000471752 ACTL6AO96019 429 aa7.29□□□□□ -1.24
USP48-207ENST00000471752 HRGP04196 525 aa7.29□□□□□ -1.24
USP48-207ENST00000471752 CHRNGP07510 517 aa7.29□□□□□ -1.24
USP48-207ENST00000471752 LINC00032P0C843 101 aa7.29□□□□□ -1.24
USP48-207ENST00000471752 MYL2P10916 166 aa7.29□□□□□ -1.24
USP48-207ENST00000471752 HSD3B1P14060 373 aa7.29□□□□□ -1.24
USP48-207ENST00000471752 CD99P14209 185 aa7.29□□□□□ -1.24
USP48-207ENST00000471752 ZNF708P17019 499 aa7.29□□□□□ -1.24
USP48-207ENST00000471752 HOXB4P17483 251 aaPredicted RBP7.29□□□□□ -1.24
USP48-207ENST00000471752 HK1P19367 917 aa7.29□□□□□ -1.24
USP48-207ENST00000471752 KLK2P20151 261 aa7.29□□□□□ -1.24
USP48-207ENST00000471752 HSD3B2P26439 372 aa7.29□□□□□ -1.24
USP48-207ENST00000471752 SRD5A2P31213 254 aa7.29□□□□□ -1.24
USP48-207ENST00000471752 GABRA3P34903 492 aa7.29□□□□□ -1.24
USP48-207ENST00000471752 KIR2DL2P43627 348 aaPredicted RBP7.29□□□□□ -1.24
USP48-207ENST00000471752 SLC6A8P48029 635 aa7.29□□□□□ -1.24
USP48-207ENST00000471752 TMED10P49755 219 aaKnown RBP7.29□□□□□ -1.24
USP48-207ENST00000471752 PKNOX1P55347 436 aa7.29□□□□□ -1.24
USP48-207ENST00000471752 DCAF7P61962 342 aa7.29□□□□□ -1.24
USP48-207ENST00000471752 ADAM8P78325 824 aa7.29□□□□□ -1.24
USP48-207ENST00000471752 ZNF155Q12901 538 aaPredicted RBP7.29□□□□□ -1.24
USP48-207ENST00000471752 SNTA1Q13424 505 aa7.29□□□□□ -1.24
USP48-207ENST00000471752 GRAMD1BQ3KR37 738 aa7.29□□□□□ -1.24
USP48-207ENST00000471752 UGT3A2Q3SY77 523 aa7.29□□□□□ -1.24
USP48-207ENST00000471752 RFTN2Q52LD8 501 aaPredicted RBP7.29□□□□□ -1.24
USP48-207ENST00000471752 C10orf62Q5T681 223 aaPredicted RBP7.29□□□□□ -1.24
USP48-207ENST00000471752 C6orf163Q5TEZ5 329 aa7.29□□□□□ -1.24
USP48-207ENST00000471752 FRMD7Q6ZUT3 714 aa7.29□□□□□ -1.24
USP48-207ENST00000471752 OLIG3Q7RTU3 272 aa7.29□□□□□ -1.24
USP48-207ENST00000471752 TRIM46Q7Z4K8 759 aa7.29□□□□□ -1.24
USP48-207ENST00000471752 TGIF2LYQ8IUE0 185 aa7.29□□□□□ -1.24
USP48-207ENST00000471752 GBP7Q8N8V2 638 aaPredicted RBP7.29□□□□□ -1.24
USP48-207ENST00000471752 FADS6Q8N9I5 356 aa7.29□□□□□ -1.24
USP48-207ENST00000471752 OR4C3Q8NH37 302 aa7.29□□□□□ -1.24
USP48-207ENST00000471752 FAM222BQ8WU58 562 aa7.29□□□□□ -1.24
USP48-207ENST00000471752 GIMAP5Q96F15 307 aa7.29□□□□□ -1.24
USP48-207ENST00000471752 C3orf30Q96M34 536 aa7.29□□□□□ -1.24
USP48-207ENST00000471752 SFXN2Q96NB2 322 aa7.29□□□□□ -1.24
USP48-207ENST00000471752 WFIKKN1Q96NZ8 548 aa7.29□□□□□ -1.24
USP48-207ENST00000471752 YIPF4Q9BSR8 244 aa7.29□□□□□ -1.24
USP48-207ENST00000471752 MECRQ9BV79 373 aa7.29□□□□□ -1.24
USP48-207ENST00000471752 RBM24Q9BX46 236 aaKnown RBP7.29□□□□□ -1.24
USP48-207ENST00000471752 TSPYL1Q9H0U9 437 aa7.29□□□□□ -1.24
USP48-207ENST00000471752 ZNF395Q9H8N7 513 aaPredicted RBP7.29□□□□□ -1.24
USP48-207ENST00000471752 EQTNQ9NQ60 294 aa7.29□□□□□ -1.24
USP48-207ENST00000471752 DLL4Q9NR61 685 aa7.29□□□□□ -1.24
USP48-207ENST00000471752 SIRT5Q9NXA8 310 aa7.29□□□□□ -1.24
USP48-207ENST00000471752 C6orf203Q9P0P8 240 aaPredicted RBP7.29□□□□□ -1.24
USP48-207ENST00000471752 SLC17A7Q9P2U7 560 aa7.29□□□□□ -1.24
USP48-207ENST00000471752 PRODH2Q9UF12 536 aa7.29□□□□□ -1.24
USP48-207ENST00000471752 CLEC4AQ9UMR7 237 aa7.29□□□□□ -1.24
USP48-207ENST00000471752 KCNE3Q9Y6H6 103 aa7.29□□□□□ -1.24
USP48-207ENST00000471752 ATRQ13535 2644 aa7.29□□□□□ -1.24
USP48-207ENST00000471752 OR2M5A3KFT3 312 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms