RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 CBR3O75828 277 aa12.9□□□□□ -0.34
TOP3B-215ENST00000470338 TRAPPC6AO75865 159 aa12.9□□□□□ -0.34
TOP3B-215ENST00000470338 H2AFXP16104 143 aaPredicted RBP12.9□□□□□ -0.34
TOP3B-215ENST00000470338 LBPP18428 481 aa12.9□□□□□ -0.34
TOP3B-215ENST00000470338 COL8A1P27658 744 aa12.9□□□□□ -0.34
TOP3B-215ENST00000470338 GABRA3P34903 492 aa12.9□□□□□ -0.34
TOP3B-215ENST00000470338 TRPC1P48995 793 aa12.9□□□□□ -0.34
TOP3B-215ENST00000470338 PRKAG1P54619 331 aa12.9□□□□□ -0.34
TOP3B-215ENST00000470338 PRR5P85299 388 aa12.9□□□□□ -0.34
TOP3B-215ENST00000470338 LSM12Q3MHD2 195 aaKnown RBP12.9□□□□□ -0.34
TOP3B-215ENST00000470338 VPS26BQ4G0F5 336 aa12.9□□□□□ -0.34
TOP3B-215ENST00000470338 WLSQ5T9L3 541 aa12.9□□□□□ -0.34
TOP3B-215ENST00000470338 OGFOD2Q6N063 350 aa12.9□□□□□ -0.34
TOP3B-215ENST00000470338 MFSD12Q6NUT3 480 aa12.9□□□□□ -0.34
TOP3B-215ENST00000470338 HDXQ7Z353 690 aa12.9□□□□□ -0.34
TOP3B-215ENST00000470338 PLCZ1Q86YW0 608 aa12.9□□□□□ -0.34
TOP3B-215ENST00000470338 OR5M9Q8NGP3 310 aa12.9□□□□□ -0.34
TOP3B-215ENST00000470338 FAM120BQ96EK7 910 aaKnown RBP12.9□□□□□ -0.34
TOP3B-215ENST00000470338 ATP6V1G3Q96LB4 118 aa12.9□□□□□ -0.34
TOP3B-215ENST00000470338 SH3GL2Q99962 352 aa12.9□□□□□ -0.34
TOP3B-215ENST00000470338 DUSP26Q9BV47 211 aa12.9□□□□□ -0.34
TOP3B-215ENST00000470338 EQTNQ9NQ60 294 aa12.9□□□□□ -0.34
TOP3B-215ENST00000470338 MRTO4Q9UKD2 239 aaKnown RBP12.9□□□□□ -0.34
TOP3B-215ENST00000470338 WIF1Q9Y5W5 379 aa12.9□□□□□ -0.34
TOP3B-215ENST00000470338 GXYLT2A0PJZ3 443 aa12.89□□□□□ -0.35
TOP3B-215ENST00000470338 FIGNL2A6NMB9 653 aa12.89□□□□□ -0.35
TOP3B-215ENST00000470338 SLCO1B7G3V0H7 640 aa12.89□□□□□ -0.35
TOP3B-215ENST00000470338 SDHDO14521 159 aa12.89□□□□□ -0.35
TOP3B-215ENST00000470338 ANKRD28O15084 1053 aa12.89□□□□□ -0.35
TOP3B-215ENST00000470338 HDAC3O15379 428 aa12.89□□□□□ -0.35
TOP3B-215ENST00000470338 WDR1O75083 606 aa12.89□□□□□ -0.35
TOP3B-215ENST00000470338 C6orf47O95873 294 aa12.89□□□□□ -0.35
TOP3B-215ENST00000470338 IGKV1D-16P01601 117 aa12.89□□□□□ -0.35
TOP3B-215ENST00000470338 HOXD4P09016 255 aaPredicted RBP12.89□□□□□ -0.35
TOP3B-215ENST00000470338 ACP2P11117 423 aa12.89□□□□□ -0.35
TOP3B-215ENST00000470338 ACVR2AP27037 513 aa12.89□□□□□ -0.35
TOP3B-215ENST00000470338 PSMD4P55036 377 aaKnown RBP12.89□□□□□ -0.35
TOP3B-215ENST00000470338 CRYZQ08257 329 aaKnown RBP12.89□□□□□ -0.35
TOP3B-215ENST00000470338 CDSNQ15517 529 aa12.89□□□□□ -0.35
TOP3B-215ENST00000470338 TTMPQ5BVD1 217 aa12.89□□□□□ -0.35
TOP3B-215ENST00000470338 NHSL2Q5HYW2 709 aa12.89□□□□□ -0.35
TOP3B-215ENST00000470338 VASNQ6EMK4 673 aa12.89□□□□□ -0.35
TOP3B-215ENST00000470338 RTL6Q6ICC9 239 aa12.89□□□□□ -0.35
TOP3B-215ENST00000470338 ZNF585AQ6P3V2 769 aa12.89□□□□□ -0.35
TOP3B-215ENST00000470338 WDR75Q8IWA0 830 aaKnown RBP12.89□□□□□ -0.35
TOP3B-215ENST00000470338 RPRMLQ8N4K4 120 aa12.89□□□□□ -0.35
TOP3B-215ENST00000470338 SLC16A11Q8NCK7 471 aa12.89□□□□□ -0.35
TOP3B-215ENST00000470338 FAM83FQ8NEG4 500 aaPredicted RBP12.89□□□□□ -0.35
TOP3B-215ENST00000470338 OR8J2Q8NGG1 315 aa12.89□□□□□ -0.35
TOP3B-215ENST00000470338 FAM110BQ8TC76 370 aa12.89□□□□□ -0.35
TOP3B-215ENST00000470338 GPR151Q8TDV0 419 aa12.89□□□□□ -0.35
TOP3B-215ENST00000470338 PIK3R3Q92569 461 aa12.89□□□□□ -0.35
TOP3B-215ENST00000470338 ZNF75CPQ92670 426 aaPredicted RBP12.89□□□□□ -0.35
TOP3B-215ENST00000470338 C16orf58Q96GQ5 468 aa12.89□□□□□ -0.35
TOP3B-215ENST00000470338 TIMP4Q99727 224 aa12.89□□□□□ -0.35
TOP3B-215ENST00000470338 CXorf36Q9H7Y0 433 aa12.89□□□□□ -0.35
TOP3B-215ENST00000470338 VIPAS39Q9H9C1 493 aa12.89□□□□□ -0.35
TOP3B-215ENST00000470338 SERHLQ9NQF3 203 aa12.89□□□□□ -0.35
TOP3B-215ENST00000470338 ZCCHC3Q9NUD5 404 aaKnown RBP12.89□□□□□ -0.35
TOP3B-215ENST00000470338 ARGLU1Q9NWB6 273 aaPredicted RBP12.89□□□□□ -0.35
TOP3B-215ENST00000470338 FAM120CQ9NX05 1096 aaKnown RBP12.89□□□□□ -0.35
TOP3B-215ENST00000470338 GIN1Q9NXP7 522 aa12.89□□□□□ -0.35
TOP3B-215ENST00000470338 ABCG2Q9UNQ0 655 aa12.89□□□□□ -0.35
TOP3B-215ENST00000470338 MRPS18CQ9Y3D5 142 aaKnown RBP12.89□□□□□ -0.35
TOP3B-215ENST00000470338 HCFC1P51610 2035 aa12.89□□□□□ -0.35
TOP3B-215ENST00000470338 ITPR2Q14571 2701 aa12.88□□□□□ -0.35
TOP3B-215ENST00000470338 TRPC5OSA6NMA1 111 aa12.88□□□□□ -0.35
TOP3B-215ENST00000470338 B4DXG7 233 aa12.88□□□□□ -0.35
TOP3B-215ENST00000470338 KCNH1O95259 989 aa12.88□□□□□ -0.35
TOP3B-215ENST00000470338 HMGN2P05204 90 aaKnown RBP12.88□□□□□ -0.35
TOP3B-215ENST00000470338 GABRA1P14867 456 aa12.88□□□□□ -0.35
TOP3B-215ENST00000470338 EVI2BP34910 448 aa12.88□□□□□ -0.35
TOP3B-215ENST00000470338 CCT3P49368 545 aaKnown RBP12.88□□□□□ -0.35
TOP3B-215ENST00000470338 PRIM2P49643 509 aa12.88□□□□□ -0.35
TOP3B-215ENST00000470338 WNT3P56703 355 aa12.88□□□□□ -0.35
TOP3B-215ENST00000470338 DUSP5Q16690 384 aa12.88□□□□□ -0.35
TOP3B-215ENST00000470338 PGS1Q32NB8 556 aa12.88□□□□□ -0.35
TOP3B-215ENST00000470338 EIPR1Q53HC9 387 aa12.88□□□□□ -0.35
TOP3B-215ENST00000470338 WIPI1Q5MNZ9 446 aaPredicted RBP12.88□□□□□ -0.35
TOP3B-215ENST00000470338 SP5Q6BEB4 398 aaPredicted RBP12.88□□□□□ -0.35
TOP3B-215ENST00000470338 ACAD11Q709F0 780 aa12.88□□□□□ -0.35
TOP3B-215ENST00000470338 SFXN5Q8TD22 340 aa12.88□□□□□ -0.35
TOP3B-215ENST00000470338 SLC9A6Q92581 669 aa12.88□□□□□ -0.35
TOP3B-215ENST00000470338 TESCQ96BS2 214 aa12.88□□□□□ -0.35
TOP3B-215ENST00000470338 TTYH2Q9BSA4 534 aa12.88□□□□□ -0.35
TOP3B-215ENST00000470338 DPY30Q9C005 99 aa12.88□□□□□ -0.35
TOP3B-215ENST00000470338 OR2B2Q9GZK3 357 aa12.88□□□□□ -0.35
TOP3B-215ENST00000470338 NEUROD4Q9HD90 331 aa12.88□□□□□ -0.35
TOP3B-215ENST00000470338 FLRT3Q9NZU0 649 aa12.88□□□□□ -0.35
TOP3B-215ENST00000470338 SLC6A5Q9Y345 797 aa12.88□□□□□ -0.35
TOP3B-215ENST00000470338 FAM215AQ9Y5M1 114 aa12.88□□□□□ -0.35
TOP3B-215ENST00000470338 SNX8Q9Y5X2 465 aa12.88□□□□□ -0.35
TOP3B-215ENST00000470338 NAV2Q8IVL1 2488 aa12.88□□□□□ -0.35
TOP3B-215ENST00000470338 ADGRG4Q8IZF6 3080 aa12.87□□□□□ -0.35
TOP3B-215ENST00000470338 C15orf38-AP3S2A0A0A6YYH1 394 aa12.87□□□□□ -0.35
TOP3B-215ENST00000470338 PRSS44E7EML9 344 aa12.87□□□□□ -0.35
TOP3B-215ENST00000470338 RNASET2O00584 256 aaKnown RBP12.87□□□□□ -0.35
TOP3B-215ENST00000470338 SCN2BO60939 215 aa12.87□□□□□ -0.35
TOP3B-215ENST00000470338 SOX30O94993 753 aa12.87□□□□□ -0.35
TOP3B-215ENST00000470338 KCNK2O95069 426 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms