RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 REP15Q6BDI9 236 aa8.12□□□□□ -1.11
SYNGAP1-205ENST00000470232 BTLAQ7Z6A9 289 aa8.12□□□□□ -1.11
SYNGAP1-205ENST00000470232 MILR1Q7Z6M3 343 aa8.12□□□□□ -1.11
SYNGAP1-205ENST00000470232 SPATA24Q86W54 205 aa8.12□□□□□ -1.11
SYNGAP1-205ENST00000470232 SLC22A9Q8IVM8 553 aa8.12□□□□□ -1.11
SYNGAP1-205ENST00000470232 CPNE9Q8IYJ1 553 aa8.12□□□□□ -1.11
SYNGAP1-205ENST00000470232 MYO1HQ8N1T3 1032 aa8.12□□□□□ -1.11
SYNGAP1-205ENST00000470232 C9orf106Q8NAJ2 232 aa8.12□□□□□ -1.11
SYNGAP1-205ENST00000470232 BHLHE22Q8NFJ8 381 aaPredicted RBP8.12□□□□□ -1.11
SYNGAP1-205ENST00000470232 ADCY4Q8NFM4 1077 aa8.12□□□□□ -1.11
SYNGAP1-205ENST00000470232 TTLQ8NG68 377 aa8.12□□□□□ -1.11
SYNGAP1-205ENST00000470232 SLC2A12Q8TD20 617 aa8.12□□□□□ -1.11
SYNGAP1-205ENST00000470232 ZNF483Q8TF39 744 aaPredicted RBP8.12□□□□□ -1.11
SYNGAP1-205ENST00000470232 ZFAND2BQ8WV99 257 aa8.12□□□□□ -1.11
SYNGAP1-205ENST00000470232 TRMT61AQ96FX7 289 aaKnown RBP8.12□□□□□ -1.11
SYNGAP1-205ENST00000470232 WDYHV1Q96HA8 205 aa8.12□□□□□ -1.11
SYNGAP1-205ENST00000470232 ART5Q96L15 291 aa8.12□□□□□ -1.11
SYNGAP1-205ENST00000470232 WFIKKN1Q96NZ8 548 aa8.12□□□□□ -1.11
SYNGAP1-205ENST00000470232 NDNQ99608 321 aa8.12□□□□□ -1.11
SYNGAP1-205ENST00000470232 GPR21Q99679 349 aa8.12□□□□□ -1.11
SYNGAP1-205ENST00000470232 MRPL1Q9BYD6 325 aaKnown RBP8.12□□□□□ -1.11
SYNGAP1-205ENST00000470232 REG4Q9BYZ8 158 aa8.12□□□□□ -1.11
SYNGAP1-205ENST00000470232 KLHL31Q9H511 634 aa8.12□□□□□ -1.11
SYNGAP1-205ENST00000470232 COPS7BQ9H9Q2 264 aaPredicted RBP8.12□□□□□ -1.11
SYNGAP1-205ENST00000470232 PELI2Q9HAT8 420 aa8.12□□□□□ -1.11
SYNGAP1-205ENST00000470232 PAPOLBQ9NRJ5 636 aaKnown RBP8.12□□□□□ -1.11
SYNGAP1-205ENST00000470232 MRGBPQ9NV56 204 aa8.12□□□□□ -1.11
SYNGAP1-205ENST00000470232 ZNF701Q9NV72 531 aaPredicted RBP8.12□□□□□ -1.11
SYNGAP1-205ENST00000470232 ADA2Q9NZK5 511 aa8.12□□□□□ -1.11
SYNGAP1-205ENST00000470232 TRMT6Q9UJA5 497 aaKnown RBP8.12□□□□□ -1.11
SYNGAP1-205ENST00000470232 CDC42EP3Q9UKI2 254 aa8.12□□□□□ -1.11
SYNGAP1-205ENST00000470232 DOCK7Q96N67 2140 aa8.12□□□□□ -1.11
SYNGAP1-205ENST00000470232 KIAA1549Q9HCM3 1950 aa8.11□□□□□ -1.11
SYNGAP1-205ENST00000470232 LRRC3CA6NJW4 275 aa8.11□□□□□ -1.11
SYNGAP1-205ENST00000470232 A8MV72 311 aaPredicted RBP8.11□□□□□ -1.11
SYNGAP1-205ENST00000470232 DEFB108AA8MXU0 73 aa8.11□□□□□ -1.11
SYNGAP1-205ENST00000470232 TGFBR3LH3BV60 316 aa8.11□□□□□ -1.11
SYNGAP1-205ENST00000470232 MSTNO14793 375 aa8.11□□□□□ -1.11
SYNGAP1-205ENST00000470232 ZNF354AO60765 605 aaPredicted RBP8.11□□□□□ -1.11
SYNGAP1-205ENST00000470232 BCAS2O75934 225 aaPredicted RBP8.11□□□□□ -1.11
SYNGAP1-205ENST00000470232 SNX4O95219 450 aa8.11□□□□□ -1.11
SYNGAP1-205ENST00000470232 STAMBPO95630 424 aa8.11□□□□□ -1.11
SYNGAP1-205ENST00000470232 ACTL6AO96019 429 aa8.11□□□□□ -1.11
SYNGAP1-205ENST00000470232 JUNP05412 331 aaKnown RBP8.11□□□□□ -1.11
SYNGAP1-205ENST00000470232 NID1P14543 1247 aa8.11□□□□□ -1.11
SYNGAP1-205ENST00000470232 CHMP24386 653 aa8.11□□□□□ -1.11
SYNGAP1-205ENST00000470232 MASP1P48740 699 aa8.11□□□□□ -1.11
SYNGAP1-205ENST00000470232 CDK9P50750 372 aaKnown RBP8.11□□□□□ -1.11
SYNGAP1-205ENST00000470232 AP1S2P56377 157 aa8.11□□□□□ -1.11
SYNGAP1-205ENST00000470232 RPP38P78345 283 aaKnown RBP8.11□□□□□ -1.11
SYNGAP1-205ENST00000470232 RUNX1T1Q06455 604 aa8.11□□□□□ -1.11
SYNGAP1-205ENST00000470232 KRTAP1-1Q07627 177 aa8.11□□□□□ -1.11
SYNGAP1-205ENST00000470232 ILF2Q12905 390 aaKnown RBP8.11□□□□□ -1.11
SYNGAP1-205ENST00000470232 STX5Q13190 355 aa8.11□□□□□ -1.11
SYNGAP1-205ENST00000470232 DYNC1I2Q13409 638 aaKnown RBP8.11□□□□□ -1.11
SYNGAP1-205ENST00000470232 VEZF1Q14119 521 aa8.11□□□□□ -1.11
SYNGAP1-205ENST00000470232 AGKQ53H12 422 aa8.11□□□□□ -1.11
SYNGAP1-205ENST00000470232 FAM45BPQ6NSW5 357 aa8.11□□□□□ -1.11
SYNGAP1-205ENST00000470232 ARPINQ7Z6K5 226 aa8.11□□□□□ -1.11
SYNGAP1-205ENST00000470232 KLHDC8AQ8IYD2 350 aa8.11□□□□□ -1.11
SYNGAP1-205ENST00000470232 TAGAPQ8N103 731 aa8.11□□□□□ -1.11
SYNGAP1-205ENST00000470232 ZNF321PQ8N8H1 164 aa8.11□□□□□ -1.11
SYNGAP1-205ENST00000470232 ANKRD53Q8N9V6 530 aa8.11□□□□□ -1.11
SYNGAP1-205ENST00000470232 FAM47BQ8NA70 645 aa8.11□□□□□ -1.11
SYNGAP1-205ENST00000470232 OR56A3Q8NH54 315 aa8.11□□□□□ -1.11
SYNGAP1-205ENST00000470232 FAM45AQ8TCE6 357 aa8.11□□□□□ -1.11
SYNGAP1-205ENST00000470232 CD200R1Q8TD46 325 aa8.11□□□□□ -1.11
SYNGAP1-205ENST00000470232 DIO2Q92813 273 aa8.11□□□□□ -1.11
SYNGAP1-205ENST00000470232 PYCR2Q96C36 320 aa8.11□□□□□ -1.11
SYNGAP1-205ENST00000470232 INTS12Q96CB8 462 aaKnown RBP8.11□□□□□ -1.11
SYNGAP1-205ENST00000470232 MAELQ96JY0 434 aaKnown RBP8.11□□□□□ -1.11
SYNGAP1-205ENST00000470232 SERINC2Q96SA4 455 aa8.11□□□□□ -1.11
SYNGAP1-205ENST00000470232 PKP2Q99959 881 aa8.11□□□□□ -1.11
SYNGAP1-205ENST00000470232 SLC39A3Q9BRY0 314 aa8.11□□□□□ -1.11
SYNGAP1-205ENST00000470232 UGT2B28Q9BY64 529 aa8.11□□□□□ -1.11
SYNGAP1-205ENST00000470232 VCX3AQ9NNX9 186 aa8.11□□□□□ -1.11
SYNGAP1-205ENST00000470232 KLHL28Q9NXS3 571 aa8.11□□□□□ -1.11
SYNGAP1-205ENST00000470232 ARL15Q9NXU5 204 aa8.11□□□□□ -1.11
SYNGAP1-205ENST00000470232 NDUFA13Q9P0J0 144 aa8.11□□□□□ -1.11
SYNGAP1-205ENST00000470232 RIMS3Q9UJD0 308 aa8.11□□□□□ -1.11
SYNGAP1-205ENST00000470232 RAB26Q9ULW5 256 aa8.11□□□□□ -1.11
SYNGAP1-205ENST00000470232 SLC6A5Q9Y345 797 aa8.11□□□□□ -1.11
SYNGAP1-205ENST00000470232 SPACA6W5XKT8 324 aa8.11□□□□□ -1.11
SYNGAP1-205ENST00000470232 NCKAP5O14513 1909 aa8.11□□□□□ -1.11
SYNGAP1-205ENST00000470232 PRSS51A0A1B0GVH4 220 aa8.1□□□□□ -1.11
SYNGAP1-205ENST00000470232 STX16-NPEPL1H3BU86 382 aa8.1□□□□□ -1.11
SYNGAP1-205ENST00000470232 MRASO14807 208 aa8.1□□□□□ -1.11
SYNGAP1-205ENST00000470232 ERI3O43414 337 aaKnown RBP8.1□□□□□ -1.11
SYNGAP1-205ENST00000470232 WIPF1O43516 503 aa8.1□□□□□ -1.11
SYNGAP1-205ENST00000470232 DENRO43583 198 aaKnown RBP8.1□□□□□ -1.11
SYNGAP1-205ENST00000470232 TRIM3O75382 744 aaPredicted RBP8.1□□□□□ -1.11
SYNGAP1-205ENST00000470232 SOX30O94993 753 aa8.1□□□□□ -1.11
SYNGAP1-205ENST00000470232 CCDC166P0CW27 439 aa8.1□□□□□ -1.11
SYNGAP1-205ENST00000470232 CPN1P15169 458 aa8.1□□□□□ -1.11
SYNGAP1-205ENST00000470232 GSTM2P28161 218 aa8.1□□□□□ -1.11
SYNGAP1-205ENST00000470232 CD79BP40259 229 aa8.1□□□□□ -1.11
SYNGAP1-205ENST00000470232 ATP4BP51164 291 aa8.1□□□□□ -1.11
SYNGAP1-205ENST00000470232 STX1BP61266 288 aa8.1□□□□□ -1.11
SYNGAP1-205ENST00000470232 REEP5Q00765 189 aa8.1□□□□□ -1.11
SYNGAP1-205ENST00000470232 MS4A2Q01362 244 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms