RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 ELP5Q8TE02 316 aa16.33■□□□□ 0.2
MRPL28-208ENST00000469744 NCLNQ969V3 563 aa16.33■□□□□ 0.2
MRPL28-208ENST00000469744 AURKBQ96GD4 344 aaPredicted RBP16.33■□□□□ 0.2
MRPL28-208ENST00000469744 SERINC2Q96SA4 455 aa16.33■□□□□ 0.2
MRPL28-208ENST00000469744 SLX1AQ9BQ83 275 aa16.33■□□□□ 0.2
MRPL28-208ENST00000469744 MS4A8Q9BY19 250 aa16.33■□□□□ 0.2
MRPL28-208ENST00000469744 CDCP1Q9H5V8 836 aa16.33■□□□□ 0.2
MRPL28-208ENST00000469744 KLHL1Q9NR64 748 aa16.33■□□□□ 0.2
MRPL28-208ENST00000469744 PRTFDC1Q9NRG1 225 aa16.33■□□□□ 0.2
MRPL28-208ENST00000469744 PNO1Q9NRX1 252 aaKnown RBP16.33■□□□□ 0.2
MRPL28-208ENST00000469744 RPS6KA6Q9UK32 745 aa16.33■□□□□ 0.2
MRPL28-208ENST00000469744 EXO1Q9UQ84 846 aaKnown RBP16.33■□□□□ 0.2
MRPL28-208ENST00000469744 OSGIN2Q9Y236 505 aa16.33■□□□□ 0.2
MRPL28-208ENST00000469744 PDLIM1O00151 329 aa16.32■□□□□ 0.2
MRPL28-208ENST00000469744 SAP18O00422 153 aaKnown RBP16.32■□□□□ 0.2
MRPL28-208ENST00000469744 PRKD3O94806 890 aa16.32■□□□□ 0.2
MRPL28-208ENST00000469744 CPSF4O95639 269 aaKnown RBP16.32■□□□□ 0.2
MRPL28-208ENST00000469744 TGFB1P01137 390 aa16.32■□□□□ 0.2
MRPL28-208ENST00000469744 PABPC4LP0CB38 370 aaKnown RBP16.32■□□□□ 0.2
MRPL28-208ENST00000469744 GP1BBP13224 206 aa16.32■□□□□ 0.2
MRPL28-208ENST00000469744 EDN3P14138 238 aa16.32■□□□□ 0.2
MRPL28-208ENST00000469744 ZNF10P21506 573 aaPredicted RBP16.32■□□□□ 0.2
MRPL28-208ENST00000469744 CAPGP40121 348 aa16.32■□□□□ 0.2
MRPL28-208ENST00000469744 CD96P40200 585 aa16.32■□□□□ 0.2
MRPL28-208ENST00000469744 MAGEA2P43356 314 aa16.32■□□□□ 0.2
MRPL28-208ENST00000469744 RPL5P46777 297 aaKnown RBP16.32■□□□□ 0.2
MRPL28-208ENST00000469744 ALDH3A2P51648 485 aa16.32■□□□□ 0.2
MRPL28-208ENST00000469744 LIM2P55344 173 aa16.32■□□□□ 0.2
MRPL28-208ENST00000469744 SLC13A2Q13183 592 aa16.32■□□□□ 0.2
MRPL28-208ENST00000469744 APOFQ13790 326 aa16.32■□□□□ 0.2
MRPL28-208ENST00000469744 DAG1Q14118 895 aa16.32■□□□□ 0.2
MRPL28-208ENST00000469744 ZNF766Q5HY98 468 aa16.32■□□□□ 0.2
MRPL28-208ENST00000469744 DEPDC1Q5TB30 811 aa16.32■□□□□ 0.2
MRPL28-208ENST00000469744 ZNF324BQ6AW86 544 aaPredicted RBP16.32■□□□□ 0.2
MRPL28-208ENST00000469744 KRT80Q6KB66 452 aa16.32■□□□□ 0.2
MRPL28-208ENST00000469744 ENPP6Q6UWR7 440 aa16.32■□□□□ 0.2
MRPL28-208ENST00000469744 ZNF793Q6ZN11 406 aa16.32■□□□□ 0.2
MRPL28-208ENST00000469744 ZNF551Q7Z340 670 aaPredicted RBP16.32■□□□□ 0.2
MRPL28-208ENST00000469744 ZCCHC7Q8N3Z6 543 aaKnown RBP16.32■□□□□ 0.2
MRPL28-208ENST00000469744 NFAM1Q8NET5 270 aaPredicted RBP16.32■□□□□ 0.2
MRPL28-208ENST00000469744 CDC26Q8NHZ8 85 aa16.32■□□□□ 0.2
MRPL28-208ENST00000469744 ZFP90Q8TF47 636 aa16.32■□□□□ 0.2
MRPL28-208ENST00000469744 UTP23Q9BRU9 249 aaKnown RBP16.32■□□□□ 0.2
MRPL28-208ENST00000469744 NPLQ9BXD5 320 aaPredicted RBP16.32■□□□□ 0.2
MRPL28-208ENST00000469744 OR51B5Q9H339 312 aa16.32■□□□□ 0.2
MRPL28-208ENST00000469744 TPT1P8Q9HAU6 139 aa16.32■□□□□ 0.2
MRPL28-208ENST00000469744 PRDM7Q9NQW5 492 aa16.32■□□□□ 0.2
MRPL28-208ENST00000469744 USE1Q9NZ43 259 aa16.32■□□□□ 0.2
MRPL28-208ENST00000469744 ABI3Q9P2A4 366 aa16.32■□□□□ 0.2
MRPL28-208ENST00000469744 MMACHCQ9Y4U1 282 aa16.32■□□□□ 0.2
MRPL28-208ENST00000469744 CLDN16Q9Y5I7 305 aa16.32■□□□□ 0.2
MRPL28-208ENST00000469744 H3BNH8 94 aa16.31■□□□□ 0.2
MRPL28-208ENST00000469744 EI24O14681 340 aa16.31■□□□□ 0.2
MRPL28-208ENST00000469744 H6PDO95479 791 aa16.31■□□□□ 0.2
MRPL28-208ENST00000469744 SERPINA1P01009 418 aa16.31■□□□□ 0.2
MRPL28-208ENST00000469744 ZNF23P17027 643 aa16.31■□□□□ 0.2
MRPL28-208ENST00000469744 TDGF1P3P51864 188 aa16.31■□□□□ 0.2
MRPL28-208ENST00000469744 CENPEQ02224 2701 aa16.31■□□□□ 0.2
MRPL28-208ENST00000469744 OC90Q02509 493 aaPredicted RBP16.31■□□□□ 0.2
MRPL28-208ENST00000469744 C2orf80Q0P641 193 aa16.31■□□□□ 0.2
MRPL28-208ENST00000469744 EPS8Q12929 822 aa16.31■□□□□ 0.2
MRPL28-208ENST00000469744 OR1C1Q15619 314 aa16.31■□□□□ 0.2
MRPL28-208ENST00000469744 INAQ16352 499 aa16.31■□□□□ 0.2
MRPL28-208ENST00000469744 ZNF468Q5VIY5 522 aaPredicted RBP16.31■□□□□ 0.2
MRPL28-208ENST00000469744 SPINK14Q6IE38 97 aa16.31■□□□□ 0.2
MRPL28-208ENST00000469744 PAGE2Q7Z2X7 111 aa16.31■□□□□ 0.2
MRPL28-208ENST00000469744 CLECL1Q8IZS7 167 aa16.31■□□□□ 0.2
MRPL28-208ENST00000469744 C10orf111Q8N326 155 aa16.31■□□□□ 0.2
MRPL28-208ENST00000469744 DHRSXQ8N5I4 330 aa16.31■□□□□ 0.2
MRPL28-208ENST00000469744 MDS2Q8NDY4 140 aa16.31■□□□□ 0.2
MRPL28-208ENST00000469744 ZFP28Q8NHY6 868 aa16.31■□□□□ 0.2
MRPL28-208ENST00000469744 THAP3Q8WTV1 239 aaPredicted RBP16.31■□□□□ 0.2
MRPL28-208ENST00000469744 NR4A3Q92570 626 aa16.31■□□□□ 0.2
MRPL28-208ENST00000469744 TMBIM1Q969X1 311 aa16.31■□□□□ 0.2
MRPL28-208ENST00000469744 PPCDCQ96CD2 204 aa16.31■□□□□ 0.2
MRPL28-208ENST00000469744 ZNF764Q96H86 408 aaPredicted RBP16.31■□□□□ 0.2
MRPL28-208ENST00000469744 SORBS1Q9BX66 1292 aaKnown RBP16.31■□□□□ 0.2
MRPL28-208ENST00000469744 OSBPL10Q9BXB5 764 aa16.31■□□□□ 0.2
MRPL28-208ENST00000469744 YTHDF1Q9BYJ9 559 aaKnown RBP16.31■□□□□ 0.2
MRPL28-208ENST00000469744 RAD21L1Q9H4I0 556 aa16.31■□□□□ 0.2
MRPL28-208ENST00000469744 SH3BP4Q9P0V3 963 aa16.31■□□□□ 0.2
MRPL28-208ENST00000469744 ADAM29Q9UKF5 820 aa16.31■□□□□ 0.2
MRPL28-208ENST00000469744 DAPP1Q9UN19 280 aa16.31■□□□□ 0.2
MRPL28-208ENST00000469744 PCDHGB4Q9UN71 923 aa16.31■□□□□ 0.2
MRPL28-208ENST00000469744 SLC5A6Q9Y289 635 aa16.31■□□□□ 0.2
MRPL28-208ENST00000469744 MYRFQ9Y2G1 1151 aa16.31■□□□□ 0.2
MRPL28-208ENST00000469744 V9GYQ6 96 aa16.31■□□□□ 0.2
MRPL28-208ENST00000469744 TRBV11-1A0A0K0K1C0 115 aa16.3■□□□□ 0.2
MRPL28-208ENST00000469744 CYR61O00622 381 aa16.3■□□□□ 0.2
MRPL28-208ENST00000469744 CLPTM1O96005 669 aa16.3■□□□□ 0.2
MRPL28-208ENST00000469744 MST1P26927 711 aa16.3■□□□□ 0.2
MRPL28-208ENST00000469744 ADARB1P78563 741 aaKnown RBP16.3■□□□□ 0.2
MRPL28-208ENST00000469744 GK3PQ14409 553 aa16.3■□□□□ 0.2
MRPL28-208ENST00000469744 KCTD21Q4G0X4 260 aa16.3■□□□□ 0.2
MRPL28-208ENST00000469744 RNF220Q5VTB9 566 aa16.3■□□□□ 0.2
MRPL28-208ENST00000469744 KHDRBS2Q5VWX1 349 aaKnown RBP16.3■□□□□ 0.2
MRPL28-208ENST00000469744 RPS19BP1Q86WX3 136 aaKnown RBP16.3■□□□□ 0.2
MRPL28-208ENST00000469744 PTOV1Q86YD1 416 aa16.3■□□□□ 0.2
MRPL28-208ENST00000469744 ZDHHC13Q8IUH4 622 aa16.3■□□□□ 0.2
MRPL28-208ENST00000469744 TRIML2Q8N7C3 387 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms