RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 KCNE1BA0A087WTH5 132 aa5.83□□□□□ -1.48
PTCD3-208ENST00000469585 LOC101059948A0A1B0GTJ6 334 aa5.83□□□□□ -1.48
PTCD3-208ENST00000469585 A0A1B0GVC2 190 aa5.83□□□□□ -1.48
PTCD3-208ENST00000469585 FEZF1A0PJY2 475 aa5.83□□□□□ -1.48
PTCD3-208ENST00000469585 UBXN8O00124 270 aa5.83□□□□□ -1.48
PTCD3-208ENST00000469585 CASC3O15234 703 aaKnown RBP5.83□□□□□ -1.48
PTCD3-208ENST00000469585 GUCY1B2O75343 617 aa5.83□□□□□ -1.48
PTCD3-208ENST00000469585 TSPAN12O95859 305 aa5.83□□□□□ -1.48
PTCD3-208ENST00000469585 SERPINA6P08185 405 aa5.83□□□□□ -1.48
PTCD3-208ENST00000469585 CYC1P08574 325 aa5.83□□□□□ -1.48
PTCD3-208ENST00000469585 ICAM2P13598 275 aa5.83□□□□□ -1.48
PTCD3-208ENST00000469585 DDX5P17844 614 aaKnown RBP5.83□□□□□ -1.48
PTCD3-208ENST00000469585 PEBP1P30086 187 aaKnown RBP5.83□□□□□ -1.48
PTCD3-208ENST00000469585 HMOX2P30519 316 aa5.83□□□□□ -1.48
PTCD3-208ENST00000469585 SLCO1A2P46721 670 aa5.83□□□□□ -1.48
PTCD3-208ENST00000469585 RPS6KA3P51812 740 aa5.83□□□□□ -1.48
PTCD3-208ENST00000469585 ACTN3Q08043 901 aaPredicted RBP5.83□□□□□ -1.48
PTCD3-208ENST00000469585 GPS2Q13227 327 aa5.83□□□□□ -1.48
PTCD3-208ENST00000469585 GRB7Q14451 532 aa5.83□□□□□ -1.48
PTCD3-208ENST00000469585 AP5B1Q2VPB7 878 aa5.83□□□□□ -1.48
PTCD3-208ENST00000469585 DEFB109BQ30KR1 87 aa5.83□□□□□ -1.48
PTCD3-208ENST00000469585 KRT71Q3SY84 523 aa5.83□□□□□ -1.48
PTCD3-208ENST00000469585 TMEM35AQ53FP2 167 aa5.83□□□□□ -1.48
PTCD3-208ENST00000469585 RUNDC3AQ59EK9 446 aa5.83□□□□□ -1.48
PTCD3-208ENST00000469585 ARL13AQ5H913 290 aaPredicted RBP5.83□□□□□ -1.48
PTCD3-208ENST00000469585 LIPJQ5W064 366 aa5.83□□□□□ -1.48
PTCD3-208ENST00000469585 SLC18B1Q6NT16 456 aa5.83□□□□□ -1.48
PTCD3-208ENST00000469585 TIFABQ6ZNK6 161 aa5.83□□□□□ -1.48
PTCD3-208ENST00000469585 PAGE2Q7Z2X7 111 aa5.83□□□□□ -1.48
PTCD3-208ENST00000469585 RNF144BQ7Z419 303 aa5.83□□□□□ -1.48
PTCD3-208ENST00000469585 YTHDF3Q7Z739 585 aaKnown RBP5.83□□□□□ -1.48
PTCD3-208ENST00000469585 PAQR7Q86WK9 346 aa5.83□□□□□ -1.48
PTCD3-208ENST00000469585 HPS6Q86YV9 775 aa5.83□□□□□ -1.48
PTCD3-208ENST00000469585 KIRREL3Q8IZU9 778 aa5.83□□□□□ -1.48
PTCD3-208ENST00000469585 TEX9Q8N6V9 391 aa5.83□□□□□ -1.48
PTCD3-208ENST00000469585 OR2Y1Q8NGV0 311 aa5.83□□□□□ -1.48
PTCD3-208ENST00000469585 ZCCHC10Q8TBK6 192 aa5.83□□□□□ -1.48
PTCD3-208ENST00000469585 RDH11Q8TC12 318 aa5.83□□□□□ -1.48
PTCD3-208ENST00000469585 C2CD4CQ8TF44 421 aa5.83□□□□□ -1.48
PTCD3-208ENST00000469585 DCAKDQ8WVC6 231 aa5.83□□□□□ -1.48
PTCD3-208ENST00000469585 ANKRD49Q8WVL7 239 aa5.83□□□□□ -1.48
PTCD3-208ENST00000469585 NEIL2Q969S2 332 aa5.83□□□□□ -1.48
PTCD3-208ENST00000469585 PHF21BQ96EK2 531 aa5.83□□□□□ -1.48
PTCD3-208ENST00000469585 CMTM7Q96FZ5 175 aa5.83□□□□□ -1.48
PTCD3-208ENST00000469585 WBP1Q96G27 269 aa5.83□□□□□ -1.48
PTCD3-208ENST00000469585 QRFPRQ96P65 431 aa5.83□□□□□ -1.48
PTCD3-208ENST00000469585 PIMREGQ9BSJ6 248 aa5.83□□□□□ -1.48
PTCD3-208ENST00000469585 ELOVL6Q9H5J4 265 aa5.83□□□□□ -1.48
PTCD3-208ENST00000469585 WDR41Q9HAD4 459 aa5.83□□□□□ -1.48
PTCD3-208ENST00000469585 EML4Q9HC35 981 aaKnown RBP5.83□□□□□ -1.48
PTCD3-208ENST00000469585 FAM60AQ9NP50 221 aa5.83□□□□□ -1.48
PTCD3-208ENST00000469585 STARD5Q9NSY2 213 aa5.83□□□□□ -1.48
PTCD3-208ENST00000469585 MAU2Q9Y6X3 613 aa5.83□□□□□ -1.48
PTCD3-208ENST00000469585 ACACBO00763 2458 aa5.82□□□□□ -1.48
PTCD3-208ENST00000469585 A0A1W2PNU3 283 aaPredicted RBP5.82□□□□□ -1.48
PTCD3-208ENST00000469585 A0A1W2PPV9 198 aa5.82□□□□□ -1.48
PTCD3-208ENST00000469585 KRT87PA6NCN2 255 aa5.82□□□□□ -1.48
PTCD3-208ENST00000469585 C17orf100A8MU93 164 aa5.82□□□□□ -1.48
PTCD3-208ENST00000469585 CTSVO60911 334 aa5.82□□□□□ -1.48
PTCD3-208ENST00000469585 SUPT7LO94864 414 aa5.82□□□□□ -1.48
PTCD3-208ENST00000469585 NSA2O95478 260 aaKnown RBP5.82□□□□□ -1.48
PTCD3-208ENST00000469585 CLDN9O95484 217 aa5.82□□□□□ -1.48
PTCD3-208ENST00000469585 AGR2O95994 175 aa5.82□□□□□ -1.48
PTCD3-208ENST00000469585 KRT6AP02538 564 aa5.82□□□□□ -1.48
PTCD3-208ENST00000469585 KRT6BP04259 564 aa5.82□□□□□ -1.48
PTCD3-208ENST00000469585 RNH1P13489 461 aaKnown RBP5.82□□□□□ -1.48
PTCD3-208ENST00000469585 CYP4B1P13584 511 aa5.82□□□□□ -1.48
PTCD3-208ENST00000469585 COX7A2P14406 83 aa5.82□□□□□ -1.48
PTCD3-208ENST00000469585 ALOX12P18054 663 aa5.82□□□□□ -1.48
PTCD3-208ENST00000469585 ITGA3P26006 1051 aa5.82□□□□□ -1.48
PTCD3-208ENST00000469585 EEF1DP29692 281 aaKnown RBP5.82□□□□□ -1.48
PTCD3-208ENST00000469585 PPP2R1BP30154 601 aa5.82□□□□□ -1.48
PTCD3-208ENST00000469585 GGT5P36269 586 aa5.82□□□□□ -1.48
PTCD3-208ENST00000469585 HSD17B3P37058 310 aa5.82□□□□□ -1.48
PTCD3-208ENST00000469585 KRT6CP48668 564 aa5.82□□□□□ -1.48
PTCD3-208ENST00000469585 EMP2P54851 167 aa5.82□□□□□ -1.48
PTCD3-208ENST00000469585 VSNL1P62760 191 aa5.82□□□□□ -1.48
PTCD3-208ENST00000469585 VAMP2P63027 116 aa5.82□□□□□ -1.48
PTCD3-208ENST00000469585 CSNK1G2P78368 415 aa5.82□□□□□ -1.48
PTCD3-208ENST00000469585 REEP5Q00765 189 aa5.82□□□□□ -1.48
PTCD3-208ENST00000469585 SRSF4Q08170 494 aaKnown RBP5.82□□□□□ -1.48
PTCD3-208ENST00000469585 AIMP2Q13155 320 aaKnown RBP5.82□□□□□ -1.48
PTCD3-208ENST00000469585 CHIT1Q13231 466 aa5.82□□□□□ -1.48
PTCD3-208ENST00000469585 DDX39BQ13838 428 aaKnown RBP5.82□□□□□ -1.48
PTCD3-208ENST00000469585 GTF2H2Q13888 395 aa5.82□□□□□ -1.48
PTCD3-208ENST00000469585 RASA2Q15283 850 aa5.82□□□□□ -1.48
PTCD3-208ENST00000469585 OR4D1Q15615 310 aa5.82□□□□□ -1.48
PTCD3-208ENST00000469585 ZIC1Q15915 447 aa5.82□□□□□ -1.48
PTCD3-208ENST00000469585 PPP1R3AQ16821 1122 aa5.82□□□□□ -1.48
PTCD3-208ENST00000469585 IMPG1Q17R60 797 aa5.82□□□□□ -1.48
PTCD3-208ENST00000469585 TOR1AIP1Q5JTV8 583 aa5.82□□□□□ -1.48
PTCD3-208ENST00000469585 ATG16L1Q676U5 607 aa5.82□□□□□ -1.48
PTCD3-208ENST00000469585 FRMPD2BQ6IN97 320 aa5.82□□□□□ -1.48
PTCD3-208ENST00000469585 ZNF425Q6IV72 752 aa5.82□□□□□ -1.48
PTCD3-208ENST00000469585 GTF2H2CQ6P1K8 395 aa5.82□□□□□ -1.48
PTCD3-208ENST00000469585 FAM199XQ6PEV8 388 aaPredicted RBP5.82□□□□□ -1.48
PTCD3-208ENST00000469585 CYP20A1Q6UW02 462 aa5.82□□□□□ -1.48
PTCD3-208ENST00000469585 ISCA2Q86U28 154 aa5.82□□□□□ -1.48
PTCD3-208ENST00000469585 TDRPQ86YL5 185 aa5.82□□□□□ -1.48
PTCD3-208ENST00000469585 METTL27Q8N6F8 245 aaPredicted RBP5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 152.1 ms