RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 SDF2Q99470 211 aa8.7□□□□□ -1.02
SMC1A-205ENST00000469129 G6PC3Q9BUM1 346 aa8.7□□□□□ -1.02
SMC1A-205ENST00000469129 CNPPD1Q9BV87 410 aa8.7□□□□□ -1.02
SMC1A-205ENST00000469129 DGCR6LQ9BY27 220 aa8.7□□□□□ -1.02
SMC1A-205ENST00000469129 SLC7A5P2Q9GIP4 190 aa8.7□□□□□ -1.02
SMC1A-205ENST00000469129 IRF2BPLQ9H1B7 796 aa8.7□□□□□ -1.02
SMC1A-205ENST00000469129 ZNF304Q9HCX3 659 aa8.7□□□□□ -1.02
SMC1A-205ENST00000469129 MKKSQ9NPJ1 570 aaPredicted RBP8.7□□□□□ -1.02
SMC1A-205ENST00000469129 FGF21Q9NSA1 209 aa8.7□□□□□ -1.02
SMC1A-205ENST00000469129 FAM86C1Q9NVL1 165 aa8.7□□□□□ -1.02
SMC1A-205ENST00000469129 SCN3BQ9NY72 215 aa8.7□□□□□ -1.02
SMC1A-205ENST00000469129 TMEM9Q9P0T7 183 aa8.7□□□□□ -1.02
SMC1A-205ENST00000469129 TESQ9UGI8 421 aaKnown RBP8.7□□□□□ -1.02
SMC1A-205ENST00000469129 A4GNTQ9UNA3 340 aa8.7□□□□□ -1.02
SMC1A-205ENST00000469129 TPRKBQ9Y3C4 175 aa8.7□□□□□ -1.02
SMC1A-205ENST00000469129 SNX5Q9Y5X3 404 aa8.7□□□□□ -1.02
SMC1A-205ENST00000469129 CACNA1HO95180 2353 aa8.69□□□□□ -1.02
SMC1A-205ENST00000469129 SH3PXD2BA1X283 911 aa8.69□□□□□ -1.02
SMC1A-205ENST00000469129 AGAP5A6NIR3 686 aa8.69□□□□□ -1.02
SMC1A-205ENST00000469129 A8MU76 341 aa8.69□□□□□ -1.02
SMC1A-205ENST00000469129 E9PQ18 207 aa8.69□□□□□ -1.02
SMC1A-205ENST00000469129 ARHGAP33O14559 1287 aa8.69□□□□□ -1.02
SMC1A-205ENST00000469129 FFAR1O14842 300 aa8.69□□□□□ -1.02
SMC1A-205ENST00000469129 PCDH17O14917 1159 aa8.69□□□□□ -1.02
SMC1A-205ENST00000469129 BRINP1O60477 761 aa8.69□□□□□ -1.02
SMC1A-205ENST00000469129 FMO6PO60774 539 aa8.69□□□□□ -1.02
SMC1A-205ENST00000469129 ABCB7O75027 752 aa8.69□□□□□ -1.02
SMC1A-205ENST00000469129 CDC123O75794 336 aaPredicted RBP8.69□□□□□ -1.02
SMC1A-205ENST00000469129 HBQ1P09105 142 aa8.69□□□□□ -1.02
SMC1A-205ENST00000469129 NID1P14543 1247 aa8.69□□□□□ -1.02
SMC1A-205ENST00000469129 TNNI3P19429 210 aa8.69□□□□□ -1.02
SMC1A-205ENST00000469129 ALAS2P22557 587 aa8.69□□□□□ -1.02
SMC1A-205ENST00000469129 CRHBPP24387 322 aa8.69□□□□□ -1.02
SMC1A-205ENST00000469129 ELK4P28324 431 aa8.69□□□□□ -1.02
SMC1A-205ENST00000469129 SOX18P35713 384 aa8.69□□□□□ -1.02
SMC1A-205ENST00000469129 ALDH3B2P48448 385 aa8.69□□□□□ -1.02
SMC1A-205ENST00000469129 ISL1P61371 349 aa8.69□□□□□ -1.02
SMC1A-205ENST00000469129 PSPHP78330 225 aa8.69□□□□□ -1.02
SMC1A-205ENST00000469129 CFHR1Q03591 330 aa8.69□□□□□ -1.02
SMC1A-205ENST00000469129 FUT7Q11130 342 aa8.69□□□□□ -1.02
SMC1A-205ENST00000469129 ZNF267Q14586 743 aaPredicted RBP8.69□□□□□ -1.02
SMC1A-205ENST00000469129 MAD2L1BPQ15013 274 aaPredicted RBP8.69□□□□□ -1.02
SMC1A-205ENST00000469129 GPR68Q15743 365 aa8.69□□□□□ -1.02
SMC1A-205ENST00000469129 SYT16Q17RD7 645 aa8.69□□□□□ -1.02
SMC1A-205ENST00000469129 PROX2Q3B8N5 592 aa8.69□□□□□ -1.02
SMC1A-205ENST00000469129 NADK2Q4G0N4 442 aa8.69□□□□□ -1.02
SMC1A-205ENST00000469129 TRIM61Q5EBN2 209 aa8.69□□□□□ -1.02
SMC1A-205ENST00000469129 MFSD4BQ5TF39 518 aa8.69□□□□□ -1.02
SMC1A-205ENST00000469129 ANKRD34AQ69YU3 496 aa8.69□□□□□ -1.02
SMC1A-205ENST00000469129 ZNF770Q6IQ21 691 aaPredicted RBP8.69□□□□□ -1.02
SMC1A-205ENST00000469129 WDR53Q7Z5U6 358 aaPredicted RBP8.69□□□□□ -1.02
SMC1A-205ENST00000469129 GPR141Q7Z602 305 aa8.69□□□□□ -1.02
SMC1A-205ENST00000469129 SATL1Q86VE3 508 aa8.69□□□□□ -1.02
SMC1A-205ENST00000469129 LACC1Q8IV20 430 aa8.69□□□□□ -1.02
SMC1A-205ENST00000469129 P3H2Q8IVL5 708 aa8.69□□□□□ -1.02
SMC1A-205ENST00000469129 OR4D11Q8NGI4 311 aa8.69□□□□□ -1.02
SMC1A-205ENST00000469129 OR6T1Q8NGN1 323 aa8.69□□□□□ -1.02
SMC1A-205ENST00000469129 FAM81AQ8TBF8 368 aa8.69□□□□□ -1.02
SMC1A-205ENST00000469129 ADAMTS16Q8TE57 1224 aa8.69□□□□□ -1.02
SMC1A-205ENST00000469129 SLC35B4Q969S0 331 aa8.69□□□□□ -1.02
SMC1A-205ENST00000469129 CNDP2Q96KP4 475 aaKnown RBP8.69□□□□□ -1.02
SMC1A-205ENST00000469129 NUDT22Q9BRQ3 303 aa8.69□□□□□ -1.02
SMC1A-205ENST00000469129 YIPF2Q9BWQ6 316 aa8.69□□□□□ -1.02
SMC1A-205ENST00000469129 UCK2Q9BZX2 261 aa8.69□□□□□ -1.02
SMC1A-205ENST00000469129 LRRN3Q9H3W5 708 aa8.69□□□□□ -1.02
SMC1A-205ENST00000469129 SYNDIG1Q9H7V2 258 aa8.69□□□□□ -1.02
SMC1A-205ENST00000469129 LANCL2Q9NS86 450 aa8.69□□□□□ -1.02
SMC1A-205ENST00000469129 IMPAD1Q9NX62 359 aa8.69□□□□□ -1.02
SMC1A-205ENST00000469129 RHCGQ9UBD6 479 aa8.69□□□□□ -1.02
SMC1A-205ENST00000469129 MKLN1Q9UL63 735 aa8.69□□□□□ -1.02
SMC1A-205ENST00000469129 ERVK-19Q9WJR5 959 aa8.69□□□□□ -1.02
SMC1A-205ENST00000469129 PCDHGA10Q9Y5H3 936 aa8.69□□□□□ -1.02
SMC1A-205ENST00000469129 LY6G6EA0A0G2JKS1 128 aa8.68□□□□□ -1.02
SMC1A-205ENST00000469129 TRBV4-1A0A0J9YWV2 114 aa8.68□□□□□ -1.02
SMC1A-205ENST00000469129 C17orf105B2RV13 164 aa8.68□□□□□ -1.02
SMC1A-205ENST00000469129 TGFBR3LH3BV60 316 aa8.68□□□□□ -1.02
SMC1A-205ENST00000469129 POLR1CO15160 346 aaPredicted RBP8.68□□□□□ -1.02
SMC1A-205ENST00000469129 NOL3O60936 208 aaKnown RBP8.68□□□□□ -1.02
SMC1A-205ENST00000469129 ZIC2O95409 532 aaPredicted RBP8.68□□□□□ -1.02
SMC1A-205ENST00000469129 EPPINO95925 133 aa8.68□□□□□ -1.02
SMC1A-205ENST00000469129 ZNF883P0CG24 379 aa8.68□□□□□ -1.02
SMC1A-205ENST00000469129 CKMT1AP12532 417 aa8.68□□□□□ -1.02
SMC1A-205ENST00000469129 OSMP13725 252 aa8.68□□□□□ -1.02
SMC1A-205ENST00000469129 FOLR1P15328 257 aa8.68□□□□□ -1.02
SMC1A-205ENST00000469129 MAOAP21397 527 aa8.68□□□□□ -1.02
SMC1A-205ENST00000469129 GABRA3P34903 492 aa8.68□□□□□ -1.02
SMC1A-205ENST00000469129 EMDP50402 254 aa8.68□□□□□ -1.02
SMC1A-205ENST00000469129 EEF1A1P68104 462 aaKnown RBP8.68□□□□□ -1.02
SMC1A-205ENST00000469129 RPP38P78345 283 aaKnown RBP8.68□□□□□ -1.02
SMC1A-205ENST00000469129 BTG2P78543 158 aa8.68□□□□□ -1.02
SMC1A-205ENST00000469129 COX10Q12887 443 aa8.68□□□□□ -1.02
SMC1A-205ENST00000469129 CDK5R2Q13319 367 aa8.68□□□□□ -1.02
SMC1A-205ENST00000469129 TRA2AQ13595 282 aaKnown RBP eCLIP8.68□□□□□ -1.02
SMC1A-205ENST00000469129 ELAVL1Q15717 326 aaKnown RBP8.68□□□□□ -1.02
SMC1A-205ENST00000469129 NPTX1Q15818 432 aa8.68□□□□□ -1.02
SMC1A-205ENST00000469129 MEP1AQ16819 746 aa8.68□□□□□ -1.02
SMC1A-205ENST00000469129 CTU2Q2VPK5 515 aaKnown RBP8.68□□□□□ -1.02
SMC1A-205ENST00000469129 MINDY4Q4G0A6 757 aa8.68□□□□□ -1.02
SMC1A-205ENST00000469129 FLYWCH1Q4VC44 716 aa8.68□□□□□ -1.02
SMC1A-205ENST00000469129 PERM1Q5SV97 790 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms