RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 IL1RL2Q9HB29 575 aa13.32□□□□□ -0.28
COL27A1-203ENST00000468565 PLSCR2Q9NRY7 297 aa13.32□□□□□ -0.28
COL27A1-203ENST00000468565 ZIM2Q9NZV7 527 aa13.32□□□□□ -0.28
COL27A1-203ENST00000468565 DLGAP4Q9Y2H0 992 aa13.32□□□□□ -0.28
COL27A1-203ENST00000468565 ZNF780BQ9Y6R6 833 aa13.32□□□□□ -0.28
COL27A1-203ENST00000468565 NCKAP5O14513 1909 aa13.32□□□□□ -0.28
COL27A1-203ENST00000468565 A0A0G2JMM0 328 aa13.31□□□□□ -0.28
COL27A1-203ENST00000468565 A0A1W2PPB8 328 aa13.31□□□□□ -0.28
COL27A1-203ENST00000468565 GNG14A0A1W2PPG7 69 aa13.31□□□□□ -0.28
COL27A1-203ENST00000468565 A0A1W2PRS3 328 aa13.31□□□□□ -0.28
COL27A1-203ENST00000468565 PINLYPA6NC86 204 aa13.31□□□□□ -0.28
COL27A1-203ENST00000468565 KIR3DP1A8MWS1 328 aa13.31□□□□□ -0.28
COL27A1-203ENST00000468565 DENRO43583 198 aaKnown RBP13.31□□□□□ -0.28
COL27A1-203ENST00000468565 HS6ST1O60243 411 aa13.31□□□□□ -0.28
COL27A1-203ENST00000468565 ERAL1O75616 437 aaKnown RBP13.31□□□□□ -0.28
COL27A1-203ENST00000468565 GLSO94925 669 aaPredicted RBP13.31□□□□□ -0.28
COL27A1-203ENST00000468565 IL3P08700 152 aa13.31□□□□□ -0.28
COL27A1-203ENST00000468565 FREM3P0C091 2139 aa13.31□□□□□ -0.28
COL27A1-203ENST00000468565 CCL3P10147 92 aa13.31□□□□□ -0.28
COL27A1-203ENST00000468565 HSD17B1P14061 328 aa13.31□□□□□ -0.28
COL27A1-203ENST00000468565 ABOP16442 354 aa13.31□□□□□ -0.28
COL27A1-203ENST00000468565 PTGER1P34995 402 aa13.31□□□□□ -0.28
COL27A1-203ENST00000468565 ALDH9A1P49189 494 aa13.31□□□□□ -0.28
COL27A1-203ENST00000468565 DIO3P55073 304 aa13.31□□□□□ -0.28
COL27A1-203ENST00000468565 MGAT2Q10469 447 aa13.31□□□□□ -0.28
COL27A1-203ENST00000468565 RCAN2Q14206 197 aa13.31□□□□□ -0.28
COL27A1-203ENST00000468565 HEPACAMQ14CZ8 416 aa13.31□□□□□ -0.28
COL27A1-203ENST00000468565 PDK3Q15120 406 aa13.31□□□□□ -0.28
COL27A1-203ENST00000468565 C6orf10Q5SRN2 563 aa13.31□□□□□ -0.28
COL27A1-203ENST00000468565 IL23RQ5VWK5 629 aa13.31□□□□□ -0.28
COL27A1-203ENST00000468565 HLA-DQA1Q5Y7H0 255 aa13.31□□□□□ -0.28
COL27A1-203ENST00000468565 SCIMPQ6UWF3 145 aa13.31□□□□□ -0.28
COL27A1-203ENST00000468565 TICAM1Q8IUC6 712 aa13.31□□□□□ -0.28
COL27A1-203ENST00000468565 LRRC25Q8N386 305 aaPredicted RBP13.31□□□□□ -0.28
COL27A1-203ENST00000468565 VWA5B2Q8N398 1253 aa13.31□□□□□ -0.28
COL27A1-203ENST00000468565 LRRC58Q96CX6 371 aa13.31□□□□□ -0.28
COL27A1-203ENST00000468565 CCDC120Q96HB5 630 aa13.31□□□□□ -0.28
COL27A1-203ENST00000468565 ZNF681Q96N22 645 aa13.31□□□□□ -0.28
COL27A1-203ENST00000468565 SLC39A3Q9BRY0 314 aa13.31□□□□□ -0.28
COL27A1-203ENST00000468565 TTTY12Q9BZ98 90 aa13.31□□□□□ -0.28
COL27A1-203ENST00000468565 MAT2BQ9NZL9 334 aa13.31□□□□□ -0.28
COL27A1-203ENST00000468565 LEF1Q9UJU2 399 aaPredicted RBP13.31□□□□□ -0.28
COL27A1-203ENST00000468565 UTS2RQ9UKP6 389 aa13.31□□□□□ -0.28
COL27A1-203ENST00000468565 CNOT11Q9UKZ1 510 aaKnown RBP13.31□□□□□ -0.28
COL27A1-203ENST00000468565 CFL2Q9Y281 166 aa13.31□□□□□ -0.28
COL27A1-203ENST00000468565 PHF3Q92576 2039 aaKnown RBP13.31□□□□□ -0.28
COL27A1-203ENST00000468565 FAM234BA2RU67 622 aa13.31□□□□□ -0.28
COL27A1-203ENST00000468565 CCDC154A6NI56 674 aa13.31□□□□□ -0.28
COL27A1-203ENST00000468565 NME4O00746 187 aa13.31□□□□□ -0.28
COL27A1-203ENST00000468565 RSL1D1O76021 490 aaKnown RBP13.31□□□□□ -0.28
COL27A1-203ENST00000468565 ZCCHC18P0CG32 403 aa13.31□□□□□ -0.28
COL27A1-203ENST00000468565 S1PR1P21453 382 aa13.31□□□□□ -0.28
COL27A1-203ENST00000468565 FEN1P39748 380 aaKnown RBP13.31□□□□□ -0.28
COL27A1-203ENST00000468565 POLR2JP52435 117 aaKnown RBP13.31□□□□□ -0.28
COL27A1-203ENST00000468565 HSF1Q00613 529 aa13.31□□□□□ -0.28
COL27A1-203ENST00000468565 PLGLB1Q02325 96 aa13.31□□□□□ -0.28
COL27A1-203ENST00000468565 NFYCQ13952 458 aa13.31□□□□□ -0.28
COL27A1-203ENST00000468565 IMPG1Q17R60 797 aa13.31□□□□□ -0.28
COL27A1-203ENST00000468565 HYAL4Q2M3T9 481 aa13.31□□□□□ -0.28
COL27A1-203ENST00000468565 C6orf136Q5SQH8 315 aa13.31□□□□□ -0.28
COL27A1-203ENST00000468565 SLC22A10Q63ZE4 541 aa13.31□□□□□ -0.28
COL27A1-203ENST00000468565 RPTNQ6XPR3 784 aa13.31□□□□□ -0.28
COL27A1-203ENST00000468565 FGD2Q7Z6J4 655 aa13.31□□□□□ -0.28
COL27A1-203ENST00000468565 SLC22A16Q86VW1 577 aa13.31□□□□□ -0.28
COL27A1-203ENST00000468565 SAMD14Q8IZD0 417 aaPredicted RBP13.31□□□□□ -0.28
COL27A1-203ENST00000468565 FNDC5Q8NAU1 212 aa13.31□□□□□ -0.28
COL27A1-203ENST00000468565 OR2T11Q8NH01 316 aa13.31□□□□□ -0.28
COL27A1-203ENST00000468565 C16orf78Q8WTQ4 265 aa13.31□□□□□ -0.28
COL27A1-203ENST00000468565 ADIPOR1Q96A54 375 aa13.31□□□□□ -0.28
COL27A1-203ENST00000468565 CTHRC1Q96CG8 243 aa13.31□□□□□ -0.28
COL27A1-203ENST00000468565 CNRIP1Q96F85 164 aaPredicted RBP13.31□□□□□ -0.28
COL27A1-203ENST00000468565 METTL2AQ96IZ6 378 aaKnown RBP13.31□□□□□ -0.28
COL27A1-203ENST00000468565 MUC13Q9H3R2 512 aa13.31□□□□□ -0.28
COL27A1-203ENST00000468565 ZDHHC11Q9H8X9 412 aa13.31□□□□□ -0.28
COL27A1-203ENST00000468565 EHD3Q9NZN3 535 aa13.31□□□□□ -0.28
COL27A1-203ENST00000468565 CNIH4Q9P003 139 aa13.31□□□□□ -0.28
COL27A1-203ENST00000468565 ZNF639Q9UID6 485 aa13.31□□□□□ -0.28
COL27A1-203ENST00000468565 SH3BGRL2Q9UJC5 107 aa13.31□□□□□ -0.28
COL27A1-203ENST00000468565 TINAGQ9UJW2 476 aa13.31□□□□□ -0.28
COL27A1-203ENST00000468565 AQP12BA6NM10 295 aa13.3□□□□□ -0.28
COL27A1-203ENST00000468565 PPIAP62937 165 aaKnown RBP13.3□□□□□ -0.28
COL27A1-203ENST00000468565 DUSP2Q05923 314 aa13.3□□□□□ -0.28
COL27A1-203ENST00000468565 CEBPEQ15744 281 aa13.3□□□□□ -0.28
COL27A1-203ENST00000468565 NTRK2Q16620 822 aa13.3□□□□□ -0.28
COL27A1-203ENST00000468565 CYP2R1Q6VVX0 501 aa13.3□□□□□ -0.28
COL27A1-203ENST00000468565 RNF165Q6ZSG1 346 aa13.3□□□□□ -0.28
COL27A1-203ENST00000468565 AQP12AQ8IXF9 295 aa13.3□□□□□ -0.28
COL27A1-203ENST00000468565 SLC15A3Q8IY34 581 aa13.3□□□□□ -0.28
COL27A1-203ENST00000468565 MARVELD2Q8N4S9 558 aa13.3□□□□□ -0.28
COL27A1-203ENST00000468565 OR52N2Q8NGI0 321 aa13.3□□□□□ -0.28
COL27A1-203ENST00000468565 ZNF675Q8TD23 568 aa13.3□□□□□ -0.28
COL27A1-203ENST00000468565 FAM192AQ9GZU8 254 aa13.3□□□□□ -0.28
COL27A1-203ENST00000468565 SLC52A3Q9NQ40 469 aa13.3□□□□□ -0.28
COL27A1-203ENST00000468565 WBP11Q9Y2W2 641 aaKnown RBP13.3□□□□□ -0.28
COL27A1-203ENST00000468565 CHCHD2Q9Y6H1 151 aaPredicted RBP13.3□□□□□ -0.28
COL27A1-203ENST00000468565 NAV2Q8IVL1 2488 aa13.29□□□□□ -0.28
COL27A1-203ENST00000468565 C9JVG2 144 aa13.29□□□□□ -0.28
COL27A1-203ENST00000468565 NPIPB8E9PQR5 432 aa13.29□□□□□ -0.28
COL27A1-203ENST00000468565 H0YJX3 145 aa13.29□□□□□ -0.28
COL27A1-203ENST00000468565 FXYD1O00168 92 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms