RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 ATP5HO75947 161 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 DNAJB5O75953 348 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 TNFSF15O95150 251 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 UNC5CO95185 931 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 KCNK5O95279 499 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 NSA2O95478 260 aaKnown RBP3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 AIFM1O95831 613 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 C6orf47O95873 294 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 IFNA16P05015 189 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 IL6P05231 212 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 KLK3P07288 261 aaPredicted RBP3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 NR2F6P10588 404 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 FGF5P12034 268 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 RNH1P13489 461 aaKnown RBP3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 TNFRSF1AP19438 455 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 CSNK2A2P19784 350 aaPredicted RBP3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 CAPN3P20807 821 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 CSRP1P21291 193 aaKnown RBP3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 NT5EP21589 574 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 CALB2P22676 271 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 JAK1P23458 1154 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 PRDX6P30041 224 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 CCKBRP32239 447 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 SOAT1P35610 550 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 RPL3P39023 403 aaKnown RBP3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 XCR1P46094 333 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 ZFP36L2P47974 494 aaKnown RBP3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 NUDT2P50583 147 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 XKP51811 444 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 MNAT1P51948 309 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 NCBP2P52298 156 aaKnown RBP eCLIP3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 HNRNPFP52597 415 aaKnown RBP3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 PDX1P52945 283 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 LIMK1P53667 647 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 PRKAG1P54619 331 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 CASP9P55211 416 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 RAB38P57729 211 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 FOXL2P58012 376 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 PSME3P61289 254 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 SKP1P63208 163 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 BTG2P78543 158 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 DCDP81605 110 aaKnown RBP3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 KLC1Q07866 573 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 STX4Q12846 297 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 BNIP1Q12981 228 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 HSPB3Q12988 150 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 SLC13A2Q13183 592 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 FAM53BQ14153 422 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 CAPRIN1Q14444 709 aaKnown RBP3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 PUM1Q14671 1186 aaKnown RBP eCLIP3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 MAPKAPK3Q16644 382 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 VWA2Q5GFL6 755 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 DCAF12Q5T6F0 453 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 ANXA8L1Q5VT79 327 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 FNDC7Q5VTL7 733 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 FAAH2Q6GMR7 532 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 LCN10Q6JVE6 187 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 ANGPTL8Q6UXH0 198 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 CEACAM20Q6UY09 585 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 ZNF551Q7Z340 670 aaPredicted RBP3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 SZRD1Q7Z422 152 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 RIMKLAQ8IXN7 391 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 CLECL1Q8IZS7 167 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 ZCCHC7Q8N3Z6 543 aaKnown RBP3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 KIF2BQ8N4N8 673 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 PCYOX1LQ8NBM8 494 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 SLC38A9Q8NBW4 561 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 VPS37AQ8NEZ2 397 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 OR4K14Q8NGD5 310 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 OR4A15Q8NGL6 344 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 WDR36Q8NI36 951 aaKnown RBP3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 DNAJB14Q8TBM8 379 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 PPWD1Q96BP3 646 aaKnown RBP3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 KLHL29Q96CT2 875 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 BOD1Q96IK1 185 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 ITCHQ96J02 903 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 FCRL1Q96LA6 429 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 ZNF285Q96NJ3 590 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 TRIB1Q96RU8 372 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 RTKNQ9BST9 563 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 INPP5KQ9BT40 448 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 THTPAQ9BU02 230 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 ZNF747Q9BV97 191 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 NPLQ9BXD5 320 aaPredicted RBP3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 ALOXE3Q9BYJ1 711 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 ULBP3Q9BZM4 244 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 CHRNA10Q9GZZ6 450 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 CLMPQ9H6B4 373 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 RPF2Q9H7B2 306 aaKnown RBP3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 RMND5AQ9H871 391 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 AKIRIN1Q9H9L7 192 aaPredicted RBP3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 GALNT9Q9HCQ5 603 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 MYNNQ9NPC7 610 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 PRTFDC1Q9NRG1 225 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 PNO1Q9NRX1 252 aaKnown RBP3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 GIMAP4Q9NUV9 329 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 ATAD3AQ9NVI7 634 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 GID8Q9NWU2 228 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 ETAA1Q9NY74 926 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 ADA2Q9NZK5 511 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms