RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 SH3BGRL2Q9UJC5 107 aa10.2□□□□□ -0.78
COL4A6-205ENST00000468338 RAP2CQ9Y3L5 183 aa10.2□□□□□ -0.78
COL4A6-205ENST00000468338 LIPGQ9Y5X9 500 aa10.2□□□□□ -0.78
COL4A6-205ENST00000468338 ATP6AP2A0A1C7CYW4 349 aa10.19□□□□□ -0.78
COL4A6-205ENST00000468338 PDPK1O15530 556 aa10.19□□□□□ -0.78
COL4A6-205ENST00000468338 CDC40O60508 579 aaKnown RBP eCLIP10.19□□□□□ -0.78
COL4A6-205ENST00000468338 PEX11AO75192 247 aa10.19□□□□□ -0.78
COL4A6-205ENST00000468338 COQ9O75208 318 aa10.19□□□□□ -0.78
COL4A6-205ENST00000468338 ATP6AP2O75787 350 aa10.19□□□□□ -0.78
COL4A6-205ENST00000468338 PDE9AO76083 593 aa10.19□□□□□ -0.78
COL4A6-205ENST00000468338 LRATO95237 230 aa10.19□□□□□ -0.78
COL4A6-205ENST00000468338 MYZAPP0CAP1 466 aa10.19□□□□□ -0.78
COL4A6-205ENST00000468338 PRPS2P11908 318 aa10.19□□□□□ -0.78
COL4A6-205ENST00000468338 ENDOUP21128 410 aaKnown RBP10.19□□□□□ -0.78
COL4A6-205ENST00000468338 PNLIPRP2P54317 469 aa10.19□□□□□ -0.78
COL4A6-205ENST00000468338 C21orf58P58505 322 aa10.19□□□□□ -0.78
COL4A6-205ENST00000468338 PLCXD2Q0VAA5 305 aa10.19□□□□□ -0.78
COL4A6-205ENST00000468338 MLC1Q15049 377 aa10.19□□□□□ -0.78
COL4A6-205ENST00000468338 GXYLT1Q4G148 440 aa10.19□□□□□ -0.78
COL4A6-205ENST00000468338 ATP6AP1LQ52LC2 224 aa10.19□□□□□ -0.78
COL4A6-205ENST00000468338 TMEM198Q66K66 360 aa10.19□□□□□ -0.78
COL4A6-205ENST00000468338 TIGD3Q6B0B8 471 aa10.19□□□□□ -0.78
COL4A6-205ENST00000468338 SLC30A6Q6NXT4 461 aa10.19□□□□□ -0.78
COL4A6-205ENST00000468338 TMEM107Q6UX40 140 aa10.19□□□□□ -0.78
COL4A6-205ENST00000468338 ZNF551Q7Z340 670 aaPredicted RBP10.19□□□□□ -0.78
COL4A6-205ENST00000468338 R3HCC1LQ7Z5L2 792 aaKnown RBP10.19□□□□□ -0.78
COL4A6-205ENST00000468338 MRGPRGQ86SM5 289 aa10.19□□□□□ -0.78
COL4A6-205ENST00000468338 CD163Q86VB7 1156 aa10.19□□□□□ -0.78
COL4A6-205ENST00000468338 LSRQ86X29 649 aaPredicted RBP10.19□□□□□ -0.78
COL4A6-205ENST00000468338 RIMKLAQ8IXN7 391 aa10.19□□□□□ -0.78
COL4A6-205ENST00000468338 KIRREL3Q8IZU9 778 aa10.19□□□□□ -0.78
COL4A6-205ENST00000468338 ZNF781Q8N8C0 355 aa10.19□□□□□ -0.78
COL4A6-205ENST00000468338 GFM2Q969S9 779 aaKnown RBP10.19□□□□□ -0.78
COL4A6-205ENST00000468338 TMBIM1Q969X1 311 aa10.19□□□□□ -0.78
COL4A6-205ENST00000468338 CIDECQ96AQ7 238 aaPredicted RBP10.19□□□□□ -0.78
COL4A6-205ENST00000468338 PPCDCQ96CD2 204 aa10.19□□□□□ -0.78
COL4A6-205ENST00000468338 ZBED6CLQ96FA7 236 aaPredicted RBP10.19□□□□□ -0.78
COL4A6-205ENST00000468338 ZNF597Q96LX8 424 aa10.19□□□□□ -0.78
COL4A6-205ENST00000468338 LMF2Q9BU23 707 aaKnown RBP10.19□□□□□ -0.78
COL4A6-205ENST00000468338 KCNK9Q9NPC2 374 aa10.19□□□□□ -0.78
COL4A6-205ENST00000468338 ASIC5Q9NY37 505 aa10.19□□□□□ -0.78
COL4A6-205ENST00000468338 PCDHGB3Q9Y5G1 929 aa10.19□□□□□ -0.78
COL4A6-205ENST00000468338 KLF2Q9Y5W3 355 aaPredicted RBP10.19□□□□□ -0.78
COL4A6-205ENST00000468338 NOTCH2Q04721 2471 aa10.19□□□□□ -0.78
COL4A6-205ENST00000468338 PCNX3Q9H6A9 2034 aa10.18□□□□□ -0.78
COL4A6-205ENST00000468338 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.18□□□□□ -0.78
COL4A6-205ENST00000468338 TRGV5A0A0B4J1U4 118 aa10.18□□□□□ -0.78
COL4A6-205ENST00000468338 TMEM120BA0PK00 339 aa10.18□□□□□ -0.78
COL4A6-205ENST00000468338 TTC36A6NLP5 189 aa10.18□□□□□ -0.78
COL4A6-205ENST00000468338 BCKDKO14874 412 aa10.18□□□□□ -0.78
COL4A6-205ENST00000468338 SCAMP2O15127 329 aaKnown RBP10.18□□□□□ -0.78
COL4A6-205ENST00000468338 AKAP10O43572 662 aa10.18□□□□□ -0.78
COL4A6-205ENST00000468338 ICOSLGO75144 302 aa10.18□□□□□ -0.78
COL4A6-205ENST00000468338 SKAP2O75563 359 aaPredicted RBP10.18□□□□□ -0.78
COL4A6-205ENST00000468338 HSPA4LO95757 839 aa10.18□□□□□ -0.78
COL4A6-205ENST00000468338 HPNP05981 417 aa10.18□□□□□ -0.78
COL4A6-205ENST00000468338 TPOP07202 933 aa10.18□□□□□ -0.78
COL4A6-205ENST00000468338 BGNP21810 368 aa10.18□□□□□ -0.78
COL4A6-205ENST00000468338 ELAVL4P26378 380 aaKnown RBP10.18□□□□□ -0.78
COL4A6-205ENST00000468338 SLC1A6P48664 564 aa10.18□□□□□ -0.78
COL4A6-205ENST00000468338 CDK9P50750 372 aaKnown RBP10.18□□□□□ -0.78
COL4A6-205ENST00000468338 RPL14P50914 215 aaKnown RBP10.18□□□□□ -0.78
COL4A6-205ENST00000468338 EMX2Q04743 252 aa10.18□□□□□ -0.78
COL4A6-205ENST00000468338 BST1Q10588 318 aa10.18□□□□□ -0.78
COL4A6-205ENST00000468338 STX3Q13277 289 aa10.18□□□□□ -0.78
COL4A6-205ENST00000468338 CASP8Q14790 479 aa10.18□□□□□ -0.78
COL4A6-205ENST00000468338 PTGR1Q14914 329 aa10.18□□□□□ -0.78
COL4A6-205ENST00000468338 CYP27C1Q4G0S4 372 aa10.18□□□□□ -0.78
COL4A6-205ENST00000468338 EXOSC6Q5RKV6 272 aaKnown RBP10.18□□□□□ -0.78
COL4A6-205ENST00000468338 IL23RQ5VWK5 629 aa10.18□□□□□ -0.78
COL4A6-205ENST00000468338 HIST2H2BCQ6DN03 193 aa10.18□□□□□ -0.78
COL4A6-205ENST00000468338 ANKRD26P1Q6NSI1 321 aa10.18□□□□□ -0.78
COL4A6-205ENST00000468338 LRRC34Q8IZ02 419 aa10.18□□□□□ -0.78
COL4A6-205ENST00000468338 EID3Q8N140 333 aa10.18□□□□□ -0.78
COL4A6-205ENST00000468338 LIX1Q8N485 282 aa10.18□□□□□ -0.78
COL4A6-205ENST00000468338 MARVELD2Q8N4S9 558 aa10.18□□□□□ -0.78
COL4A6-205ENST00000468338 OR4N2Q8NGD1 307 aa10.18□□□□□ -0.78
COL4A6-205ENST00000468338 CLHC1Q8NHS4 586 aa10.18□□□□□ -0.78
COL4A6-205ENST00000468338 PSMA8Q8TAA3 256 aa10.18□□□□□ -0.78
COL4A6-205ENST00000468338 PPP1R14CQ8TAE6 165 aa10.18□□□□□ -0.78
COL4A6-205ENST00000468338 NEIL3Q8TAT5 605 aa10.18□□□□□ -0.78
COL4A6-205ENST00000468338 NUDT8Q8WV74 236 aa10.18□□□□□ -0.78
COL4A6-205ENST00000468338 ZBTB9Q96C00 473 aa10.18□□□□□ -0.78
COL4A6-205ENST00000468338 COQ8BQ96D53 544 aa10.18□□□□□ -0.78
COL4A6-205ENST00000468338 GIMAP5Q96F15 307 aa10.18□□□□□ -0.78
COL4A6-205ENST00000468338 COL21A1Q96P44 957 aa10.18□□□□□ -0.78
COL4A6-205ENST00000468338 GNRHR2Q96P88 292 aa10.18□□□□□ -0.78
COL4A6-205ENST00000468338 TP63Q9H3D4 680 aaPredicted RBP10.18□□□□□ -0.78
COL4A6-205ENST00000468338 DDX18Q9NVP1 670 aaKnown RBP10.18□□□□□ -0.78
COL4A6-205ENST00000468338 SH3BP4Q9P0V3 963 aa10.18□□□□□ -0.78
COL4A6-205ENST00000468338 B4GALT7Q9UBV7 327 aa10.18□□□□□ -0.78
COL4A6-205ENST00000468338 C15orf41Q9Y2V0 281 aa10.18□□□□□ -0.78
COL4A6-205ENST00000468338 POLR3KQ9Y2Y1 108 aaPredicted RBP10.18□□□□□ -0.78
COL4A6-205ENST00000468338 MAST4O15021 2626 aa10.18□□□□□ -0.78
COL4A6-205ENST00000468338 NPIPA2E9PIF3 369 aa10.17□□□□□ -0.78
COL4A6-205ENST00000468338 NPIPA3F8WFD2 350 aa10.17□□□□□ -0.78
COL4A6-205ENST00000468338 SNNO75324 88 aaPredicted RBP10.17□□□□□ -0.78
COL4A6-205ENST00000468338 REM1O75628 298 aa10.17□□□□□ -0.78
COL4A6-205ENST00000468338 LAMP1P11279 417 aa10.17□□□□□ -0.78
COL4A6-205ENST00000468338 DDX5P17844 614 aaKnown RBP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms