RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 PLEKHF2Q9H8W4 249 aa22.15■■□□□ 1.14
PTCH1-210ENST00000468211 TAS2R7Q9NYW3 318 aa22.15■■□□□ 1.14
PTCH1-210ENST00000468211 C19orf53Q9UNZ5 99 aaPredicted RBP22.15■■□□□ 1.14
PTCH1-210ENST00000468211 CCL27Q9Y4X3 112 aa22.15■■□□□ 1.14
PTCH1-210ENST00000468211 A0A1W2PPR1 153 aa22.14■■□□□ 1.13
PTCH1-210ENST00000468211 SHBGP04278 402 aa22.14■■□□□ 1.13
PTCH1-210ENST00000468211 CLDN15P56746 228 aa22.14■■□□□ 1.13
PTCH1-210ENST00000468211 PSPHP78330 225 aa22.14■■□□□ 1.13
PTCH1-210ENST00000468211 GAB1Q13480 694 aa22.14■■□□□ 1.13
PTCH1-210ENST00000468211 IMPG1Q17R60 797 aa22.14■■□□□ 1.13
PTCH1-210ENST00000468211 FBXW10Q5XX13 1052 aa22.14■■□□□ 1.13
PTCH1-210ENST00000468211 GRAMD2AQ8IUY3 354 aa22.14■■□□□ 1.13
PTCH1-210ENST00000468211 CHDHQ8NE62 594 aaPredicted RBP22.14■■□□□ 1.13
PTCH1-210ENST00000468211 OR2M3Q8NG83 312 aa22.14■■□□□ 1.13
PTCH1-210ENST00000468211 OR4K17Q8NGC6 315 aa22.14■■□□□ 1.13
PTCH1-210ENST00000468211 CCDC126Q96EE4 140 aa22.14■■□□□ 1.13
PTCH1-210ENST00000468211 EGLN2Q96KS0 407 aa22.14■■□□□ 1.13
PTCH1-210ENST00000468211 AMDHD1Q96NU7 426 aa22.14■■□□□ 1.13
PTCH1-210ENST00000468211 MIEF1Q9NQG6 463 aa22.14■■□□□ 1.13
PTCH1-210ENST00000468211 PPP4R1LQ9P1A2 415 aa22.14■■□□□ 1.13
PTCH1-210ENST00000468211 PTGDR2Q9Y5Y4 395 aa22.14■■□□□ 1.13
PTCH1-210ENST00000468211 NIPBLQ6KC79 2804 aaeCLIP22.13■■□□□ 1.13
PTCH1-210ENST00000468211 A8MXE2 369 aa22.13■■□□□ 1.13
PTCH1-210ENST00000468211 H0YC42 278 aa22.13■■□□□ 1.13
PTCH1-210ENST00000468211 COQ9O75208 318 aa22.13■■□□□ 1.13
PTCH1-210ENST00000468211 GLRA3O75311 464 aa22.13■■□□□ 1.13
PTCH1-210ENST00000468211 ATE1O95260 518 aa22.13■■□□□ 1.13
PTCH1-210ENST00000468211 CPA2P48052 419 aa22.13■■□□□ 1.13
PTCH1-210ENST00000468211 TPD52P55327 224 aaPredicted RBP22.13■■□□□ 1.13
PTCH1-210ENST00000468211 DSCR4P56555 118 aaPredicted RBP22.13■■□□□ 1.13
PTCH1-210ENST00000468211 POU4F3Q15319 338 aa22.13■■□□□ 1.13
PTCH1-210ENST00000468211 NOXRED1Q6NXP6 359 aa22.13■■□□□ 1.13
PTCH1-210ENST00000468211 UBQLNLQ8IYU4 475 aa22.13■■□□□ 1.13
PTCH1-210ENST00000468211 OR2L13Q8N349 312 aa22.13■■□□□ 1.13
PTCH1-210ENST00000468211 OR5M1Q8NGP8 315 aa22.13■■□□□ 1.13
PTCH1-210ENST00000468211 KIF18AQ8NI77 898 aa22.13■■□□□ 1.13
PTCH1-210ENST00000468211 MBD6Q96DN6 1003 aa22.13■■□□□ 1.13
PTCH1-210ENST00000468211 ELP4Q96EB1 424 aa22.13■■□□□ 1.13
PTCH1-210ENST00000468211 MED11Q9P086 117 aa22.13■■□□□ 1.13
PTCH1-210ENST00000468211 GRID1Q9ULK0 1009 aa22.13■■□□□ 1.13
PTCH1-210ENST00000468211 A0A1W2PNV4 684 aa22.12■■□□□ 1.13
PTCH1-210ENST00000468211 PLIN3O60664 434 aa22.12■■□□□ 1.13
PTCH1-210ENST00000468211 HRGP04196 525 aa22.12■■□□□ 1.13
PTCH1-210ENST00000468211 MRPS22P82650 360 aaKnown RBP22.12■■□□□ 1.13
PTCH1-210ENST00000468211 FOXD4Q12950 439 aaPredicted RBP22.12■■□□□ 1.13
PTCH1-210ENST00000468211 STX5Q13190 355 aa22.12■■□□□ 1.13
PTCH1-210ENST00000468211 CYP27C1Q4G0S4 372 aa22.12■■□□□ 1.13
PTCH1-210ENST00000468211 ALPK1Q96QP1 1244 aa22.12■■□□□ 1.13
PTCH1-210ENST00000468211 YIPF4Q9BSR8 244 aa22.12■■□□□ 1.13
PTCH1-210ENST00000468211 RSL1D1O76021 490 aaKnown RBP22.11■■□□□ 1.13
PTCH1-210ENST00000468211 RAF1P04049 648 aa22.11■■□□□ 1.13
PTCH1-210ENST00000468211 HK1P19367 917 aa22.11■■□□□ 1.13
PTCH1-210ENST00000468211 SUCLG1P53597 346 aaKnown RBP22.11■■□□□ 1.13
PTCH1-210ENST00000468211 DNAJB13P59910 316 aa22.11■■□□□ 1.13
PTCH1-210ENST00000468211 KIAA0040Q15053 153 aa22.11■■□□□ 1.13
PTCH1-210ENST00000468211 BCL2A1Q16548 175 aa22.11■■□□□ 1.13
PTCH1-210ENST00000468211 CLEC6AQ6EIG7 209 aa22.11■■□□□ 1.13
PTCH1-210ENST00000468211 ANKRD26P1Q6NSI1 321 aa22.11■■□□□ 1.13
PTCH1-210ENST00000468211 ZNF551Q7Z340 670 aaPredicted RBP22.11■■□□□ 1.13
PTCH1-210ENST00000468211 MARCH3Q86UD3 253 aa22.11■■□□□ 1.13
PTCH1-210ENST00000468211 FAM76AQ8TAV0 307 aa22.11■■□□□ 1.13
PTCH1-210ENST00000468211 PIGMQ9H3S5 423 aa22.11■■□□□ 1.13
PTCH1-210ENST00000468211 DDX18Q9NVP1 670 aaKnown RBP22.11■■□□□ 1.13
PTCH1-210ENST00000468211 PACSIN3Q9UKS6 424 aa22.11■■□□□ 1.13
PTCH1-210ENST00000468211 ZNF337Q9Y3M9 751 aa22.11■■□□□ 1.13
PTCH1-210ENST00000468211 GXYLT2A0PJZ3 443 aa22.1■■□□□ 1.13
PTCH1-210ENST00000468211 SH3D21A4FU49 640 aa22.1■■□□□ 1.13
PTCH1-210ENST00000468211 KIF2AO00139 706 aaPredicted RBP22.1■■□□□ 1.13
PTCH1-210ENST00000468211 CRCPO75575 148 aa22.1■■□□□ 1.13
PTCH1-210ENST00000468211 SLITRK5O94991 958 aa22.1■■□□□ 1.13
PTCH1-210ENST00000468211 IL33O95760 270 aa22.1■■□□□ 1.13
PTCH1-210ENST00000468211 IGKV1D-16P01601 117 aa22.1■■□□□ 1.13
PTCH1-210ENST00000468211 NTSP30990 170 aa22.1■■□□□ 1.13
PTCH1-210ENST00000468211 ADAM8P78325 824 aa22.1■■□□□ 1.13
PTCH1-210ENST00000468211 VWA1Q6PCB0 445 aa22.1■■□□□ 1.13
PTCH1-210ENST00000468211 FIG4Q92562 907 aa22.1■■□□□ 1.13
PTCH1-210ENST00000468211 GFM2Q969S9 779 aaKnown RBP22.1■■□□□ 1.13
PTCH1-210ENST00000468211 STARD4Q96DR4 205 aa22.1■■□□□ 1.13
PTCH1-210ENST00000468211 DACH2Q96NX9 599 aa22.1■■□□□ 1.13
PTCH1-210ENST00000468211 LMF2Q9BU23 707 aaKnown RBP22.1■■□□□ 1.13
PTCH1-210ENST00000468211 ACBD3Q9H3P7 528 aa22.1■■□□□ 1.13
PTCH1-210ENST00000468211 RRAGDQ9NQL2 400 aaPredicted RBP22.1■■□□□ 1.13
PTCH1-210ENST00000468211 OXSMQ9NWU1 459 aa22.1■■□□□ 1.13
PTCH1-210ENST00000468211 EDARQ9UNE0 448 aa22.1■■□□□ 1.13
PTCH1-210ENST00000468211 ABCG2Q9UNQ0 655 aa22.1■■□□□ 1.13
PTCH1-210ENST00000468211 PEPDP12955 493 aa22.09■■□□□ 1.13
PTCH1-210ENST00000468211 CRHR1P34998 444 aa22.09■■□□□ 1.13
PTCH1-210ENST00000468211 RFX3P48380 749 aa22.09■■□□□ 1.13
PTCH1-210ENST00000468211 PPP2R2AP63151 447 aa22.09■■□□□ 1.13
PTCH1-210ENST00000468211 DECR1Q16698 335 aa22.09■■□□□ 1.13
PTCH1-210ENST00000468211 CCDC153Q494R4 210 aa22.09■■□□□ 1.13
PTCH1-210ENST00000468211 CFAP157Q5JU67 520 aa22.09■■□□□ 1.13
PTCH1-210ENST00000468211 RAET1LQ5VY80 246 aa22.09■■□□□ 1.13
PTCH1-210ENST00000468211 APOOLQ6UXV4 268 aa22.09■■□□□ 1.13
PTCH1-210ENST00000468211 CAMKMTQ7Z624 323 aa22.09■■□□□ 1.13
PTCH1-210ENST00000468211 OR2T11Q8NH01 316 aa22.09■■□□□ 1.13
PTCH1-210ENST00000468211 DUSP19Q8WTR2 217 aa22.09■■□□□ 1.13
PTCH1-210ENST00000468211 DTNBP1Q96EV8 351 aa22.09■■□□□ 1.13
PTCH1-210ENST00000468211 Q9N2J8 555 aa22.09■■□□□ 1.13
PTCH1-210ENST00000468211 DLL4Q9NR61 685 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms