RNA–Protein interactions for RNA: ENST00000467681.5

SSBP1-206, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 630 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-206ENST00000467681 TSPAN10Q9H1Z9 355 aaPredicted RBP12.47□□□□□ -0.41
SSBP1-206ENST00000467681 METTL7AQ9H8H3 244 aa12.47□□□□□ -0.41
SSBP1-206ENST00000467681 SERHLQ9NQF3 203 aa12.47□□□□□ -0.41
SSBP1-206ENST00000467681 TRIM33Q9UPN9 1127 aa12.47□□□□□ -0.41
SSBP1-206ENST00000467681 FREM3P0C091 2139 aa12.46□□□□□ -0.41
SSBP1-206ENST00000467681 RNF103-CHMP3A0A140T963 221 aa12.46□□□□□ -0.41
SSBP1-206ENST00000467681 PRAMEF25A6NGN4 478 aa12.46□□□□□ -0.41
SSBP1-206ENST00000467681 LRRC3CA6NJW4 275 aa12.46□□□□□ -0.41
SSBP1-206ENST00000467681 DUXAA6NLW8 204 aa12.46□□□□□ -0.41
SSBP1-206ENST00000467681 FAM166BA8MTA8 275 aa12.46□□□□□ -0.41
SSBP1-206ENST00000467681 TFECO14948 347 aaPredicted RBP12.46□□□□□ -0.41
SSBP1-206ENST00000467681 HS6ST1O60243 411 aa12.46□□□□□ -0.41
SSBP1-206ENST00000467681 FADS1O60427 444 aa12.46□□□□□ -0.41
SSBP1-206ENST00000467681 KCNK2O95069 426 aa12.46□□□□□ -0.41
SSBP1-206ENST00000467681 UNC5CO95185 931 aa12.46□□□□□ -0.41
SSBP1-206ENST00000467681 RFPL3SP0C7P2 107 aa12.46□□□□□ -0.41
SSBP1-206ENST00000467681 NCF2P19878 526 aaPredicted RBP12.46□□□□□ -0.41
SSBP1-206ENST00000467681 MATN1P21941 496 aa12.46□□□□□ -0.41
SSBP1-206ENST00000467681 LCN1P31025 176 aa12.46□□□□□ -0.41
SSBP1-206ENST00000467681 SOAT1P35610 550 aa12.46□□□□□ -0.41
SSBP1-206ENST00000467681 UQCRFS1P47985 274 aa12.46□□□□□ -0.41
SSBP1-206ENST00000467681 TRPC1P48995 793 aa12.46□□□□□ -0.41
SSBP1-206ENST00000467681 ELOAQ14241 798 aaKnown RBP12.46□□□□□ -0.41
SSBP1-206ENST00000467681 SQLEQ14534 574 aa12.46□□□□□ -0.41
SSBP1-206ENST00000467681 SLC10A1Q14973 349 aa12.46□□□□□ -0.41
SSBP1-206ENST00000467681 EIF2S3LQ2VIR3 472 aaKnown RBP12.46□□□□□ -0.41
SSBP1-206ENST00000467681 CMPK2Q5EBM0 449 aa12.46□□□□□ -0.41
SSBP1-206ENST00000467681 FNDC7Q5VTL7 733 aa12.46□□□□□ -0.41
SSBP1-206ENST00000467681 ZNF621Q6ZSS3 439 aa12.46□□□□□ -0.41
SSBP1-206ENST00000467681 COX18Q8N8Q8 333 aa12.46□□□□□ -0.41
SSBP1-206ENST00000467681 FBXO30Q8TB52 745 aa12.46□□□□□ -0.41
SSBP1-206ENST00000467681 MIPOL1Q8TD10 442 aa12.46□□□□□ -0.41
SSBP1-206ENST00000467681 JADE3Q92613 823 aa12.46□□□□□ -0.41
SSBP1-206ENST00000467681 VPS33AQ96AX1 596 aa12.46□□□□□ -0.41
SSBP1-206ENST00000467681 NEURL3Q96EH8 262 aa12.46□□□□□ -0.41
SSBP1-206ENST00000467681 RMND5BQ96G75 393 aaPredicted RBP12.46□□□□□ -0.41
SSBP1-206ENST00000467681 TMEM41AQ96HV5 264 aa12.46□□□□□ -0.41
SSBP1-206ENST00000467681 ITCHQ96J02 903 aa12.46□□□□□ -0.41
SSBP1-206ENST00000467681 JSRP1Q96MG2 331 aaPredicted RBP12.46□□□□□ -0.41
SSBP1-206ENST00000467681 PHF12Q96QT6 1004 aa12.46□□□□□ -0.41
SSBP1-206ENST00000467681 PANX1Q96RD7 426 aa12.46□□□□□ -0.41
SSBP1-206ENST00000467681 TMEM120AQ9BXJ8 343 aa12.46□□□□□ -0.41
SSBP1-206ENST00000467681 RABEP2Q9H5N1 569 aa12.46□□□□□ -0.41
SSBP1-206ENST00000467681 RMND5AQ9H871 391 aa12.46□□□□□ -0.41
SSBP1-206ENST00000467681 ZDHHC11Q9H8X9 412 aa12.46□□□□□ -0.41
SSBP1-206ENST00000467681 SLC52A3Q9NQ40 469 aa12.46□□□□□ -0.41
SSBP1-206ENST00000467681 PCDHGB3Q9Y5G1 929 aa12.46□□□□□ -0.41
SSBP1-206ENST00000467681 KCNE3Q9Y6H6 103 aa12.46□□□□□ -0.41
SSBP1-206ENST00000467681 MYO18BQ8IUG5 2567 aa12.46□□□□□ -0.42
SSBP1-206ENST00000467681 C2orf72A6NCS6 295 aa12.45□□□□□ -0.42
SSBP1-206ENST00000467681 ACOT7O00154 380 aa12.45□□□□□ -0.42
SSBP1-206ENST00000467681 RFXANKO14593 260 aa12.45□□□□□ -0.42
SSBP1-206ENST00000467681 UTS2O95399 124 aa12.45□□□□□ -0.42
SSBP1-206ENST00000467681 ZCCHC18P0CG32 403 aa12.45□□□□□ -0.42
SSBP1-206ENST00000467681 CDKN2CP42773 168 aa12.45□□□□□ -0.42
SSBP1-206ENST00000467681 ARFIP2P53365 341 aa12.45□□□□□ -0.42
SSBP1-206ENST00000467681 GAS1P54826 345 aa12.45□□□□□ -0.42
SSBP1-206ENST00000467681 KCNK10P57789 538 aa12.45□□□□□ -0.42
SSBP1-206ENST00000467681 POU6F2P78424 691 aaPredicted RBP12.45□□□□□ -0.42
SSBP1-206ENST00000467681 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.45□□□□□ -0.42
SSBP1-206ENST00000467681 AGKQ53H12 422 aa12.45□□□□□ -0.42
SSBP1-206ENST00000467681 SAXO2Q658L1 398 aa12.45□□□□□ -0.42
SSBP1-206ENST00000467681 CGB2Q6NT52 195 aa12.45□□□□□ -0.42
SSBP1-206ENST00000467681 FIGNL1Q6PIW4 674 aa12.45□□□□□ -0.42
SSBP1-206ENST00000467681 GHDCQ8N2G8 530 aa12.45□□□□□ -0.42
SSBP1-206ENST00000467681 FAM109AQ8N4B1 249 aa12.45□□□□□ -0.42
SSBP1-206ENST00000467681 TRIML2Q8N7C3 387 aa12.45□□□□□ -0.42
SSBP1-206ENST00000467681 WDSUB1Q8N9V3 476 aa12.45□□□□□ -0.42
SSBP1-206ENST00000467681 PRR7Q8TB68 274 aa12.45□□□□□ -0.42
SSBP1-206ENST00000467681 CDS1Q92903 461 aa12.45□□□□□ -0.42
SSBP1-206ENST00000467681 OTUB1Q96FW1 271 aaPredicted RBP12.45□□□□□ -0.42
SSBP1-206ENST00000467681 CHMP6Q96FZ7 201 aa12.45□□□□□ -0.42
SSBP1-206ENST00000467681 GNRHR2Q96P88 292 aa12.45□□□□□ -0.42
SSBP1-206ENST00000467681 OR7D2Q96RA2 312 aa12.45□□□□□ -0.42
SSBP1-206ENST00000467681 SLC35A5Q9BS91 424 aa12.45□□□□□ -0.42
SSBP1-206ENST00000467681 SERHL2Q9H4I8 314 aa12.45□□□□□ -0.42
SSBP1-206ENST00000467681 ZNF385DQ9H6B1 395 aa12.45□□□□□ -0.42
SSBP1-206ENST00000467681 PLSCR2Q9NRY7 297 aa12.45□□□□□ -0.42
SSBP1-206ENST00000467681 FBXO34Q9NWN3 711 aa12.45□□□□□ -0.42
SSBP1-206ENST00000467681 QPCTLQ9NXS2 382 aa12.45□□□□□ -0.42
SSBP1-206ENST00000467681 KLRF1Q9NZS2 232 aa12.45□□□□□ -0.42
SSBP1-206ENST00000467681 FLRT3Q9NZU0 649 aa12.45□□□□□ -0.42
SSBP1-206ENST00000467681 SPTBN1Q01082 2364 aaKnown RBP12.45□□□□□ -0.42
SSBP1-206ENST00000467681 PRRC2CQ9Y520 2896 aaKnown RBP12.45□□□□□ -0.42
SSBP1-206ENST00000467681 SPTAN1Q13813 2472 aaKnown RBP12.45□□□□□ -0.42
SSBP1-206ENST00000467681 MED12Q93074 2177 aa12.45□□□□□ -0.42
SSBP1-206ENST00000467681 ADAM10O14672 748 aa12.44□□□□□ -0.42
SSBP1-206ENST00000467681 SNPHO15079 494 aa12.44□□□□□ -0.42
SSBP1-206ENST00000467681 PDE9AO76083 593 aa12.44□□□□□ -0.42
SSBP1-206ENST00000467681 IGHG3P01860 377 aa12.44□□□□□ -0.42
SSBP1-206ENST00000467681 GSNP06396 782 aa12.44□□□□□ -0.42
SSBP1-206ENST00000467681 NGFRP08138 427 aa12.44□□□□□ -0.42
SSBP1-206ENST00000467681 CD1EP15812 388 aa12.44□□□□□ -0.42
SSBP1-206ENST00000467681 ELAVL4P26378 380 aaKnown RBP12.44□□□□□ -0.42
SSBP1-206ENST00000467681 CHI3L1P36222 383 aaPredicted RBP12.44□□□□□ -0.42
SSBP1-206ENST00000467681 MAGEA5P43359 124 aa12.44□□□□□ -0.42
SSBP1-206ENST00000467681 RFX3P48380 749 aa12.44□□□□□ -0.42
SSBP1-206ENST00000467681 MASP1P48740 699 aa12.44□□□□□ -0.42
SSBP1-206ENST00000467681 RPS26P62854 115 aaKnown RBP12.44□□□□□ -0.42
SSBP1-206ENST00000467681 RCAN2Q14206 197 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms