RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 ZNF350Q9GZX5 532 aa13.99□□□□□ -0.17
NPHP4-205ENST00000466897 SH2D2AQ9NP31 389 aa13.99□□□□□ -0.17
NPHP4-205ENST00000466897 A4GALTQ9NPC4 353 aa13.99□□□□□ -0.17
NPHP4-205ENST00000466897 SPAG4Q9NPE6 437 aa13.99□□□□□ -0.17
NPHP4-205ENST00000466897 HPF1Q9NWY4 346 aa13.99□□□□□ -0.17
NPHP4-205ENST00000466897 PCDHGB6Q9Y5F9 930 aa13.99□□□□□ -0.17
NPHP4-205ENST00000466897 DNAJA2O60884 412 aa13.98□□□□□ -0.17
NPHP4-205ENST00000466897 ATP5HO75947 161 aa13.98□□□□□ -0.17
NPHP4-205ENST00000466897 NGFRP08138 427 aa13.98□□□□□ -0.17
NPHP4-205ENST00000466897 TFPTP0C1Z6 253 aa13.98□□□□□ -0.17
NPHP4-205ENST00000466897 ARAFP10398 606 aa13.98□□□□□ -0.17
NPHP4-205ENST00000466897 IL12BP29460 328 aa13.98□□□□□ -0.17
NPHP4-205ENST00000466897 CPOXP36551 454 aa13.98□□□□□ -0.17
NPHP4-205ENST00000466897 CD96P40200 585 aa13.98□□□□□ -0.17
NPHP4-205ENST00000466897 GZMMP51124 257 aa13.98□□□□□ -0.17
NPHP4-205ENST00000466897 CASP9P55211 416 aa13.98□□□□□ -0.17
NPHP4-205ENST00000466897 PSME3P61289 254 aa13.98□□□□□ -0.17
NPHP4-205ENST00000466897 RPP38P78345 283 aaKnown RBP13.98□□□□□ -0.17
NPHP4-205ENST00000466897 RBBP4Q09028 425 aa13.98□□□□□ -0.17
NPHP4-205ENST00000466897 FUT5Q11128 374 aa13.98□□□□□ -0.17
NPHP4-205ENST00000466897 SELPLGQ14242 412 aa13.98□□□□□ -0.17
NPHP4-205ENST00000466897 SPATS1Q496A3 300 aa13.98□□□□□ -0.17
NPHP4-205ENST00000466897 RABL3Q5HYI8 236 aa13.98□□□□□ -0.17
NPHP4-205ENST00000466897 GCNT6Q5T4J0 391 aa13.98□□□□□ -0.17
NPHP4-205ENST00000466897 ZNF468Q5VIY5 522 aaPredicted RBP13.98□□□□□ -0.17
NPHP4-205ENST00000466897 C19orf48Q6RUI8 117 aa13.98□□□□□ -0.17
NPHP4-205ENST00000466897 RTL4Q6ZR62 310 aa13.98□□□□□ -0.17
NPHP4-205ENST00000466897 C16orf62Q7Z3J2 963 aa13.98□□□□□ -0.17
NPHP4-205ENST00000466897 CALHM3Q86XJ0 350 aa13.98□□□□□ -0.17
NPHP4-205ENST00000466897 CYP4Z2PQ8N1L4 340 aa13.98□□□□□ -0.17
NPHP4-205ENST00000466897 MDS2Q8NDY4 140 aa13.98□□□□□ -0.17
NPHP4-205ENST00000466897 XAGE5Q8WWM1 108 aa13.98□□□□□ -0.17
NPHP4-205ENST00000466897 HGDQ93099 445 aa13.98□□□□□ -0.17
NPHP4-205ENST00000466897 OTUB1Q96FW1 271 aaPredicted RBP13.98□□□□□ -0.17
NPHP4-205ENST00000466897 SDF2Q99470 211 aa13.98□□□□□ -0.17
NPHP4-205ENST00000466897 SAP130Q9H0E3 1048 aa13.98□□□□□ -0.17
NPHP4-205ENST00000466897 ZBTB20Q9HC78 741 aaPredicted RBP13.98□□□□□ -0.17
NPHP4-205ENST00000466897 CALML5Q9NZT1 146 aa13.98□□□□□ -0.17
NPHP4-205ENST00000466897 PCDHGA10Q9Y5H3 936 aa13.98□□□□□ -0.17
NPHP4-205ENST00000466897 KCNE3Q9Y6H6 103 aa13.98□□□□□ -0.17
NPHP4-205ENST00000466897 ITPR1Q14643 2758 aa13.97□□□□□ -0.17
NPHP4-205ENST00000466897 PRAMEF27A3QJZ7 478 aa13.97□□□□□ -0.17
NPHP4-205ENST00000466897 TMEM247A6NEH6 219 aa13.97□□□□□ -0.17
NPHP4-205ENST00000466897 B2RBV5 119 aa13.97□□□□□ -0.17
NPHP4-205ENST00000466897 TP53I11O14683 189 aa13.97□□□□□ -0.17
NPHP4-205ENST00000466897 STX11O75558 287 aa13.97□□□□□ -0.17
NPHP4-205ENST00000466897 REM1O75628 298 aa13.97□□□□□ -0.17
NPHP4-205ENST00000466897 NEURL1O76050 574 aa13.97□□□□□ -0.17
NPHP4-205ENST00000466897 IGKV1D-16P01601 117 aa13.97□□□□□ -0.17
NPHP4-205ENST00000466897 TNFSF10P50591 281 aa13.97□□□□□ -0.17
NPHP4-205ENST00000466897 ARG2P78540 354 aa13.97□□□□□ -0.17
NPHP4-205ENST00000466897 ADRM1Q16186 407 aa13.97□□□□□ -0.17
NPHP4-205ENST00000466897 ZNF630Q2M218 657 aaPredicted RBP13.97□□□□□ -0.17
NPHP4-205ENST00000466897 LRRC74BQ6ZQY2 392 aa13.97□□□□□ -0.17
NPHP4-205ENST00000466897 ZNF227Q86WZ6 799 aa13.97□□□□□ -0.17
NPHP4-205ENST00000466897 SLC30A8Q8IWU4 369 aa13.97□□□□□ -0.17
NPHP4-205ENST00000466897 SLC15A3Q8IY34 581 aa13.97□□□□□ -0.17
NPHP4-205ENST00000466897 PRR22Q8IZ63 422 aa13.97□□□□□ -0.17
NPHP4-205ENST00000466897 ARHGAP24Q8N264 748 aa13.97□□□□□ -0.17
NPHP4-205ENST00000466897 C10orf111Q8N326 155 aa13.97□□□□□ -0.17
NPHP4-205ENST00000466897 ZADH2Q8N4Q0 377 aa13.97□□□□□ -0.17
NPHP4-205ENST00000466897 RBM15BQ8NDT2 890 aaKnown RBP13.97□□□□□ -0.17
NPHP4-205ENST00000466897 C9orf43Q8TAL5 461 aaPredicted RBP13.97□□□□□ -0.17
NPHP4-205ENST00000466897 PAQR8Q8TEZ7 354 aa13.97□□□□□ -0.17
NPHP4-205ENST00000466897 SLC38A5Q8WUX1 472 aa13.97□□□□□ -0.17
NPHP4-205ENST00000466897 RAB8BQ92930 207 aa13.97□□□□□ -0.17
NPHP4-205ENST00000466897 TMCO6Q96DC7 493 aa13.97□□□□□ -0.17
NPHP4-205ENST00000466897 REXO5Q96IC2 774 aaKnown RBP13.97□□□□□ -0.17
NPHP4-205ENST00000466897 ECSITQ9BQ95 431 aa13.97□□□□□ -0.17
NPHP4-205ENST00000466897 BCL2L10Q9HD36 194 aa13.97□□□□□ -0.17
NPHP4-205ENST00000466897 CNIH4Q9P003 139 aa13.97□□□□□ -0.17
NPHP4-205ENST00000466897 LRFN1Q9P244 771 aa13.97□□□□□ -0.17
NPHP4-205ENST00000466897 TMEM181Q9P2C4 612 aa13.97□□□□□ -0.17
NPHP4-205ENST00000466897 ABCG2Q9UNQ0 655 aa13.97□□□□□ -0.17
NPHP4-205ENST00000466897 CHCHD2Q9Y6H1 151 aaPredicted RBP13.97□□□□□ -0.17
NPHP4-205ENST00000466897 DSPPQ9NZW4 1301 aa13.96□□□□□ -0.17
NPHP4-205ENST00000466897 ANKRD33BA6NCL7 494 aa13.96□□□□□ -0.17
NPHP4-205ENST00000466897 FAM220BPB1ANY3 271 aa13.96□□□□□ -0.17
NPHP4-205ENST00000466897 EBAG9O00559 213 aa13.96□□□□□ -0.17
NPHP4-205ENST00000466897 NME4O00746 187 aa13.96□□□□□ -0.17
NPHP4-205ENST00000466897 HS6ST1O60243 411 aa13.96□□□□□ -0.17
NPHP4-205ENST00000466897 KIAA0513O60268 411 aa13.96□□□□□ -0.17
NPHP4-205ENST00000466897 DPM1O60762 260 aa13.96□□□□□ -0.17
NPHP4-205ENST00000466897 UGT2B11O75310 529 aa13.96□□□□□ -0.17
NPHP4-205ENST00000466897 PDGFAP04085 211 aa13.96□□□□□ -0.17
NPHP4-205ENST00000466897 FAM87AP0C7U9 286 aa13.96□□□□□ -0.17
NPHP4-205ENST00000466897 ATP6V1C1P21283 382 aa13.96□□□□□ -0.17
NPHP4-205ENST00000466897 SLC7A2P52569 658 aa13.96□□□□□ -0.17
NPHP4-205ENST00000466897 CRISP3P54108 245 aa13.96□□□□□ -0.17
NPHP4-205ENST00000466897 EEFSECP57772 596 aaKnown RBP13.96□□□□□ -0.17
NPHP4-205ENST00000466897 HPCAP84074 193 aa13.96□□□□□ -0.17
NPHP4-205ENST00000466897 MXRA7P84157 204 aa13.96□□□□□ -0.17
NPHP4-205ENST00000466897 OC90Q02509 493 aaPredicted RBP13.96□□□□□ -0.17
NPHP4-205ENST00000466897 SNTA1Q13424 505 aa13.96□□□□□ -0.17
NPHP4-205ENST00000466897 OR1C1Q15619 314 aa13.96□□□□□ -0.17
NPHP4-205ENST00000466897 MAPK11Q15759 364 aa13.96□□□□□ -0.17
NPHP4-205ENST00000466897 CYP51A1Q16850 503 aa13.96□□□□□ -0.17
NPHP4-205ENST00000466897 LACTB2Q53H82 288 aaPredicted RBP13.96□□□□□ -0.17
NPHP4-205ENST00000466897 TBCELQ5QJ74 424 aa13.96□□□□□ -0.17
NPHP4-205ENST00000466897 ERICH5Q6P6B1 374 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms