RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 ARHGDIGQ99819 225 aa17.02■□□□□ 0.31
COL9A3-205ENST00000466192 GPN2Q9H9Y4 310 aaPredicted RBP17.02■□□□□ 0.31
COL9A3-205ENST00000466192 C11orf16Q9NQ32 467 aa17.02■□□□□ 0.31
COL9A3-205ENST00000466192 SELENONQ9NZV5 590 aa17.02■□□□□ 0.31
COL9A3-205ENST00000466192 SLC13A4Q9UKG4 626 aa17.02■□□□□ 0.31
COL9A3-205ENST00000466192 WDR45Q9Y484 360 aa17.02■□□□□ 0.31
COL9A3-205ENST00000466192 CLCA1A8K7I4 914 aa17.01■□□□□ 0.31
COL9A3-205ENST00000466192 H3BN98 237 aa17.01■□□□□ 0.31
COL9A3-205ENST00000466192 HRO43593 1189 aa17.01■□□□□ 0.31
COL9A3-205ENST00000466192 HOXA6P31267 233 aa17.01■□□□□ 0.31
COL9A3-205ENST00000466192 SLC13A2Q13183 592 aa17.01■□□□□ 0.31
COL9A3-205ENST00000466192 AMZ1Q400G9 498 aa17.01■□□□□ 0.31
COL9A3-205ENST00000466192 TCTE1Q5JU00 501 aa17.01■□□□□ 0.31
COL9A3-205ENST00000466192 GARNL3Q5VVW2 1013 aa17.01■□□□□ 0.31
COL9A3-205ENST00000466192 LYSMD4Q5XG99 296 aa17.01■□□□□ 0.31
COL9A3-205ENST00000466192 CLIP4Q8N3C7 705 aa17.01■□□□□ 0.31
COL9A3-205ENST00000466192 PIK3R3Q92569 461 aa17.01■□□□□ 0.31
COL9A3-205ENST00000466192 GGHQ92820 318 aa17.01■□□□□ 0.31
COL9A3-205ENST00000466192 PRRC1Q96M27 445 aa17.01■□□□□ 0.31
COL9A3-205ENST00000466192 ELF4Q99607 663 aaPredicted RBP17.01■□□□□ 0.31
COL9A3-205ENST00000466192 POLR2J3Q9H1A7 115 aaKnown RBP17.01■□□□□ 0.31
COL9A3-205ENST00000466192 MTHFD2LQ9H903 347 aaPredicted RBP17.01■□□□□ 0.31
COL9A3-205ENST00000466192 PLCXD1Q9NUJ7 323 aa17.01■□□□□ 0.31
COL9A3-205ENST00000466192 GPR83Q9NYM4 423 aa17.01■□□□□ 0.31
COL9A3-205ENST00000466192 ENPP5Q9UJA9 477 aa17.01■□□□□ 0.31
COL9A3-205ENST00000466192 CCDC163A0A0D9SF12 145 aa17.01■□□□□ 0.31
COL9A3-205ENST00000466192 OR2W5A6NFC9 320 aa17.01■□□□□ 0.31
COL9A3-205ENST00000466192 OR10H2O60403 315 aa17.01■□□□□ 0.31
COL9A3-205ENST00000466192 MRPS14O60783 128 aaKnown RBP17.01■□□□□ 0.31
COL9A3-205ENST00000466192 PFDN1O60925 122 aa17.01■□□□□ 0.31
COL9A3-205ENST00000466192 CBX7O95931 251 aa17.01■□□□□ 0.31
COL9A3-205ENST00000466192 IFI6P09912 130 aa17.01■□□□□ 0.31
COL9A3-205ENST00000466192 ALOX5P09917 674 aa17.01■□□□□ 0.31
COL9A3-205ENST00000466192 GLB1P16278 677 aa17.01■□□□□ 0.31
COL9A3-205ENST00000466192 PRKAR1BP31321 381 aa17.01■□□□□ 0.31
COL9A3-205ENST00000466192 MAP3K8P41279 467 aa17.01■□□□□ 0.31
COL9A3-205ENST00000466192 SEPHS1P49903 392 aa17.01■□□□□ 0.31
COL9A3-205ENST00000466192 DUSP8Q13202 625 aa17.01■□□□□ 0.31
COL9A3-205ENST00000466192 INAVAQ3KP66 663 aa17.01■□□□□ 0.31
COL9A3-205ENST00000466192 SYT6Q5T7P8 510 aaPredicted RBP17.01■□□□□ 0.31
COL9A3-205ENST00000466192 PTCHD4Q6ZW05 846 aa17.01■□□□□ 0.31
COL9A3-205ENST00000466192 CDRT4Q8N9R6 151 aa17.01■□□□□ 0.31
COL9A3-205ENST00000466192 OR6C4Q8NGE1 309 aa17.01■□□□□ 0.31
COL9A3-205ENST00000466192 MMABQ96EY8 250 aaPredicted RBP17.01■□□□□ 0.31
COL9A3-205ENST00000466192 CLDN16Q9Y5I7 305 aa17.01■□□□□ 0.31
COL9A3-205ENST00000466192 CENPVL1A0A0U1RR11 272 aa17■□□□□ 0.31
COL9A3-205ENST00000466192 FITM1A5D6W6 292 aa17■□□□□ 0.31
COL9A3-205ENST00000466192 LCKP06239 509 aa17■□□□□ 0.31
COL9A3-205ENST00000466192 ACVR2AP27037 513 aa17■□□□□ 0.31
COL9A3-205ENST00000466192 AVPR1BP47901 424 aa17■□□□□ 0.31
COL9A3-205ENST00000466192 BTG2P78543 158 aa17■□□□□ 0.31
COL9A3-205ENST00000466192 NIPAL1Q6NVV3 410 aa17■□□□□ 0.31
COL9A3-205ENST00000466192 DHRS4L2Q6PKH6 230 aa17■□□□□ 0.31
COL9A3-205ENST00000466192 ANKRD13BQ86YJ7 626 aa17■□□□□ 0.31
COL9A3-205ENST00000466192 VWA5B2Q8N398 1253 aa17■□□□□ 0.31
COL9A3-205ENST00000466192 Q8N9G6 341 aaPredicted RBP17■□□□□ 0.31
COL9A3-205ENST00000466192 OR4K5Q8NGD3 323 aa17■□□□□ 0.31
COL9A3-205ENST00000466192 DUSP22Q9NRW4 184 aa17■□□□□ 0.31
COL9A3-205ENST00000466192 FBXO34Q9NWN3 711 aa17■□□□□ 0.31
COL9A3-205ENST00000466192 ADAMTS9Q9P2N4 1935 aa16.99■□□□□ 0.31
COL9A3-205ENST00000466192 CLDN24A6NM45 220 aa16.99■□□□□ 0.31
COL9A3-205ENST00000466192 CTNSO60931 367 aa16.99■□□□□ 0.31
COL9A3-205ENST00000466192 BCAS1O75363 584 aaPredicted RBP16.99■□□□□ 0.31
COL9A3-205ENST00000466192 S1PR1P21453 382 aa16.99■□□□□ 0.31
COL9A3-205ENST00000466192 CSF2RBP32927 897 aa16.99■□□□□ 0.31
COL9A3-205ENST00000466192 ST13P50502 369 aaKnown RBP16.99■□□□□ 0.31
COL9A3-205ENST00000466192 TAS2R41P59536 307 aa16.99■□□□□ 0.31
COL9A3-205ENST00000466192 MAP4K2Q12851 820 aa16.99■□□□□ 0.31
COL9A3-205ENST00000466192 ILKQ13418 452 aa16.99■□□□□ 0.31
COL9A3-205ENST00000466192 AQP6Q13520 282 aa16.99■□□□□ 0.31
COL9A3-205ENST00000466192 DCST2Q5T1A1 773 aa16.99■□□□□ 0.31
COL9A3-205ENST00000466192 ZCCHC12Q6PEW1 402 aa16.99■□□□□ 0.31
COL9A3-205ENST00000466192 ZBTB46Q86UZ6 589 aa16.99■□□□□ 0.31
COL9A3-205ENST00000466192 ZNF595Q8IYB9 648 aa16.99■□□□□ 0.31
COL9A3-205ENST00000466192 OR52R1Q8NGF1 315 aa16.99■□□□□ 0.31
COL9A3-205ENST00000466192 MYDGFQ969H8 173 aa16.99■□□□□ 0.31
COL9A3-205ENST00000466192 PPP1R14BQ96C90 147 aa16.99■□□□□ 0.31
COL9A3-205ENST00000466192 STACQ99469 402 aa16.99■□□□□ 0.31
COL9A3-205ENST00000466192 ZNF350Q9GZX5 532 aa16.99■□□□□ 0.31
COL9A3-205ENST00000466192 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.99■□□□□ 0.31
COL9A3-205ENST00000466192 MRPS33Q9Y291 106 aaKnown RBP16.99■□□□□ 0.31
COL9A3-205ENST00000466192 ZNF443Q9Y2A4 671 aaPredicted RBP16.99■□□□□ 0.31
COL9A3-205ENST00000466192 DMDP11532 3685 aa16.99■□□□□ 0.31
COL9A3-205ENST00000466192 ADAMTS20P59510 1910 aa16.99■□□□□ 0.31
COL9A3-205ENST00000466192 CPSF4LA6NMK7 179 aaKnown RBP16.99■□□□□ 0.31
COL9A3-205ENST00000466192 H3BMH7 237 aa16.99■□□□□ 0.31
COL9A3-205ENST00000466192 DUX1O43812 170 aa16.99■□□□□ 0.31
COL9A3-205ENST00000466192 BCL10O95999 233 aa16.99■□□□□ 0.31
COL9A3-205ENST00000466192 TDGF1P13385 188 aa16.99■□□□□ 0.31
COL9A3-205ENST00000466192 MMP11P24347 488 aa16.99■□□□□ 0.31
COL9A3-205ENST00000466192 ARRB1P49407 418 aaPredicted RBP16.99■□□□□ 0.31
COL9A3-205ENST00000466192 IGLV3-21P80748 117 aaPredicted RBP16.99■□□□□ 0.31
COL9A3-205ENST00000466192 HOXC5Q00444 222 aa16.99■□□□□ 0.31
COL9A3-205ENST00000466192 STX4Q12846 297 aa16.99■□□□□ 0.31
COL9A3-205ENST00000466192 SPCS2Q15005 226 aa16.99■□□□□ 0.31
COL9A3-205ENST00000466192 GPR68Q15743 365 aa16.99■□□□□ 0.31
COL9A3-205ENST00000466192 CTF1Q16619 201 aa16.99■□□□□ 0.31
COL9A3-205ENST00000466192 SNAP47Q5SQN1 464 aa16.99■□□□□ 0.31
COL9A3-205ENST00000466192 ZER1Q7Z7L7 766 aa16.99■□□□□ 0.31
COL9A3-205ENST00000466192 COX18Q8N8Q8 333 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms