RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 ANKRA2Q9H9E1 313 aa8.78□□□□□ -1
USP39-212ENST00000465514 BRF2Q9HAW0 419 aa8.78□□□□□ -1
USP39-212ENST00000465514 NMRK1Q9NWW6 199 aa8.78□□□□□ -1
USP39-212ENST00000465514 CLCF1Q9UBD9 225 aa8.78□□□□□ -1
USP39-212ENST00000465514 HEY2Q9UBP5 337 aa8.78□□□□□ -1
USP39-212ENST00000465514 LPAR3Q9UBY5 353 aa8.78□□□□□ -1
USP39-212ENST00000465514 FBXL2Q9UKC9 423 aa8.78□□□□□ -1
USP39-212ENST00000465514 UTS2RQ9UKP6 389 aa8.78□□□□□ -1
USP39-212ENST00000465514 SNX6Q9UNH7 406 aa8.78□□□□□ -1
USP39-212ENST00000465514 PRKDCP78527 4128 aaKnown RBP8.78□□□□□ -1
USP39-212ENST00000465514 NBEAL2Q6ZNJ1 2754 aa8.78□□□□□ -1
USP39-212ENST00000465514 A8MT66 165 aa8.77□□□□□ -1.01
USP39-212ENST00000465514 MANBAO00462 879 aa8.77□□□□□ -1.01
USP39-212ENST00000465514 PLOD2O00469 737 aa8.77□□□□□ -1.01
USP39-212ENST00000465514 ZIC3O60481 467 aa8.77□□□□□ -1.01
USP39-212ENST00000465514 OR4F21O95013 312 aa8.77□□□□□ -1.01
USP39-212ENST00000465514 ESRRBO95718 433 aa8.77□□□□□ -1.01
USP39-212ENST00000465514 SBK3P0C264 359 aa8.77□□□□□ -1.01
USP39-212ENST00000465514 CT45A8P0DMV1 189 aa8.77□□□□□ -1.01
USP39-212ENST00000465514 CT45A9P0DMV2 189 aa8.77□□□□□ -1.01
USP39-212ENST00000465514 COL6A2P12110 1019 aa8.77□□□□□ -1.01
USP39-212ENST00000465514 EGR1P18146 543 aa8.77□□□□□ -1.01
USP39-212ENST00000465514 SRD5A1P18405 259 aa8.77□□□□□ -1.01
USP39-212ENST00000465514 TCEA1P23193 301 aaKnown RBP8.77□□□□□ -1.01
USP39-212ENST00000465514 CHMP24386 653 aa8.77□□□□□ -1.01
USP39-212ENST00000465514 SRD5A2P31213 254 aa8.77□□□□□ -1.01
USP39-212ENST00000465514 IDUAP35475 653 aa8.77□□□□□ -1.01
USP39-212ENST00000465514 HSD17B3P37058 310 aa8.77□□□□□ -1.01
USP39-212ENST00000465514 SERPINB9P50453 376 aa8.77□□□□□ -1.01
USP39-212ENST00000465514 LHX2P50458 406 aa8.77□□□□□ -1.01
USP39-212ENST00000465514 DIO3P55073 304 aa8.77□□□□□ -1.01
USP39-212ENST00000465514 CLDN18P56856 261 aa8.77□□□□□ -1.01
USP39-212ENST00000465514 CORO7P57737 925 aa8.77□□□□□ -1.01
USP39-212ENST00000465514 ETF1P62495 437 aaKnown RBP8.77□□□□□ -1.01
USP39-212ENST00000465514 TRA2BP62995 288 aaKnown RBP8.77□□□□□ -1.01
USP39-212ENST00000465514 GAB1Q13480 694 aa8.77□□□□□ -1.01
USP39-212ENST00000465514 CT45A2Q5DJT8 189 aa8.77□□□□□ -1.01
USP39-212ENST00000465514 ZNF628Q5EBL2 1059 aa8.77□□□□□ -1.01
USP39-212ENST00000465514 TCHHL1Q5QJ38 904 aaPredicted RBP8.77□□□□□ -1.01
USP39-212ENST00000465514 OR5M10Q6IEU7 315 aa8.77□□□□□ -1.01
USP39-212ENST00000465514 C8orf74Q6P047 294 aa8.77□□□□□ -1.01
USP39-212ENST00000465514 AAGABQ6PD74 315 aa8.77□□□□□ -1.01
USP39-212ENST00000465514 ZNF550Q7Z398 422 aa8.77□□□□□ -1.01
USP39-212ENST00000465514 GRAMD2AQ8IUY3 354 aa8.77□□□□□ -1.01
USP39-212ENST00000465514 C17orf53Q8N3J3 647 aaPredicted RBP8.77□□□□□ -1.01
USP39-212ENST00000465514 ZNF675Q8TD23 568 aa8.77□□□□□ -1.01
USP39-212ENST00000465514 ANP32BQ92688 251 aaKnown RBP8.77□□□□□ -1.01
USP39-212ENST00000465514 KAT2AQ92830 837 aa8.77□□□□□ -1.01
USP39-212ENST00000465514 SLC35A4Q96G79 324 aa8.77□□□□□ -1.01
USP39-212ENST00000465514 SFXN2Q96NB2 322 aa8.77□□□□□ -1.01
USP39-212ENST00000465514 BTBD9Q96Q07 612 aa8.77□□□□□ -1.01
USP39-212ENST00000465514 PAFAH2Q99487 392 aa8.77□□□□□ -1.01
USP39-212ENST00000465514 FUT8Q9BYC5 575 aa8.77□□□□□ -1.01
USP39-212ENST00000465514 SHARPINQ9H0F6 387 aa8.77□□□□□ -1.01
USP39-212ENST00000465514 MRPL46Q9H2W6 279 aaKnown RBP8.77□□□□□ -1.01
USP39-212ENST00000465514 ACBD3Q9H3P7 528 aa8.77□□□□□ -1.01
USP39-212ENST00000465514 PFDN4Q9NQP4 134 aa8.77□□□□□ -1.01
USP39-212ENST00000465514 TMEM160Q9NX00 188 aa8.77□□□□□ -1.01
USP39-212ENST00000465514 VPS29Q9UBQ0 182 aa8.77□□□□□ -1.01
USP39-212ENST00000465514 ZNF225Q9UK10 706 aa8.77□□□□□ -1.01
USP39-212ENST00000465514 PACSIN3Q9UKS6 424 aa8.77□□□□□ -1.01
USP39-212ENST00000465514 DLGAP4Q9Y2H0 992 aa8.77□□□□□ -1.01
USP39-212ENST00000465514 MRPS18CQ9Y3D5 142 aaKnown RBP8.77□□□□□ -1.01
USP39-212ENST00000465514 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.76□□□□□ -1.01
USP39-212ENST00000465514 A0A0G2JK05 382 aa8.76□□□□□ -1.01
USP39-212ENST00000465514 A0A1W2PNV4 684 aa8.76□□□□□ -1.01
USP39-212ENST00000465514 B4DXG7 233 aa8.76□□□□□ -1.01
USP39-212ENST00000465514 TRIM49D1C9J1S8 452 aa8.76□□□□□ -1.01
USP39-212ENST00000465514 TSPAN2O60636 221 aa8.76□□□□□ -1.01
USP39-212ENST00000465514 ADAM11O75078 769 aa8.76□□□□□ -1.01
USP39-212ENST00000465514 TNFSF13O75888 250 aa8.76□□□□□ -1.01
USP39-212ENST00000465514 BCAS2O75934 225 aaPredicted RBP8.76□□□□□ -1.01
USP39-212ENST00000465514 TGM6O95932 706 aa8.76□□□□□ -1.01
USP39-212ENST00000465514 PGRP06401 933 aa8.76□□□□□ -1.01
USP39-212ENST00000465514 IL3P08700 152 aa8.76□□□□□ -1.01
USP39-212ENST00000465514 CHN1P15882 459 aa8.76□□□□□ -1.01
USP39-212ENST00000465514 ZNF708P17019 499 aa8.76□□□□□ -1.01
USP39-212ENST00000465514 GRK2P25098 689 aa8.76□□□□□ -1.01
USP39-212ENST00000465514 DPP4P27487 766 aa8.76□□□□□ -1.01
USP39-212ENST00000465514 KRT20P35900 424 aa8.76□□□□□ -1.01
USP39-212ENST00000465514 GAS1P54826 345 aa8.76□□□□□ -1.01
USP39-212ENST00000465514 CASP9P55211 416 aa8.76□□□□□ -1.01
USP39-212ENST00000465514 RPS4XP62701 263 aaKnown RBP8.76□□□□□ -1.01
USP39-212ENST00000465514 EEF1A1P68104 462 aaKnown RBP8.76□□□□□ -1.01
USP39-212ENST00000465514 RAE1P78406 368 aaKnown RBP8.76□□□□□ -1.01
USP39-212ENST00000465514 EFR3AQ14156 821 aa8.76□□□□□ -1.01
USP39-212ENST00000465514 TEX35Q5T0J7 233 aa8.76□□□□□ -1.01
USP39-212ENST00000465514 EEF1A1P5Q5VTE0 462 aa8.76□□□□□ -1.01
USP39-212ENST00000465514 SCIMPQ6UWF3 145 aa8.76□□□□□ -1.01
USP39-212ENST00000465514 NPSR1Q6W5P4 371 aa8.76□□□□□ -1.01
USP39-212ENST00000465514 C12orf54Q6X4T0 127 aa8.76□□□□□ -1.01
USP39-212ENST00000465514 ZNF704Q6ZNC4 412 aaPredicted RBP8.76□□□□□ -1.01
USP39-212ENST00000465514 IL17RELQ6ZVW7 336 aa8.76□□□□□ -1.01
USP39-212ENST00000465514 LARP4Q71RC2 724 aaKnown RBP eCLIP8.76□□□□□ -1.01
USP39-212ENST00000465514 MEX3DQ86XN8 651 aaKnown RBP8.76□□□□□ -1.01
USP39-212ENST00000465514 RELL1Q8IUW5 271 aa8.76□□□□□ -1.01
USP39-212ENST00000465514 TMEM151AQ8N4L1 468 aa8.76□□□□□ -1.01
USP39-212ENST00000465514 ARIH2OSQ8N7S6 290 aa8.76□□□□□ -1.01
USP39-212ENST00000465514 CDYL2Q8N8U2 506 aa8.76□□□□□ -1.01
USP39-212ENST00000465514 OR9A2Q8NGT5 310 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms