RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 RMND5BQ96G75 393 aaPredicted RBP18.61■□□□□ 0.57
SKA3-205ENST00000465471 YIPF4Q9BSR8 244 aa18.61■□□□□ 0.57
SKA3-205ENST00000465471 INPP5KQ9BT40 448 aa18.61■□□□□ 0.57
SKA3-205ENST00000465471 OSBPL11Q9BXB4 747 aa18.61■□□□□ 0.57
SKA3-205ENST00000465471 TSPAN10Q9H1Z9 355 aaPredicted RBP18.61■□□□□ 0.57
SKA3-205ENST00000465471 ZNF703Q9H7S9 590 aaPredicted RBP18.61■□□□□ 0.57
SKA3-205ENST00000465471 ZFP64Q9NPA5 681 aa18.61■□□□□ 0.57
SKA3-205ENST00000465471 PLSCR2Q9NRY7 297 aa18.61■□□□□ 0.57
SKA3-205ENST00000465471 MRTO4Q9UKD2 239 aaKnown RBP18.61■□□□□ 0.57
SKA3-205ENST00000465471 BOKQ9UMX3 212 aaPredicted RBP18.61■□□□□ 0.57
SKA3-205ENST00000465471 NPIPA5E9PKD4 350 aa18.6■□□□□ 0.57
SKA3-205ENST00000465471 ACOT7O00154 380 aa18.6■□□□□ 0.57
SKA3-205ENST00000465471 TFECO14948 347 aaPredicted RBP18.6■□□□□ 0.57
SKA3-205ENST00000465471 HS6ST1O60243 411 aa18.6■□□□□ 0.57
SKA3-205ENST00000465471 SOX30O94993 753 aa18.6■□□□□ 0.57
SKA3-205ENST00000465471 KCNK2O95069 426 aa18.6■□□□□ 0.57
SKA3-205ENST00000465471 PTPN6P29350 595 aa18.6■□□□□ 0.57
SKA3-205ENST00000465471 GAS1P54826 345 aa18.6■□□□□ 0.57
SKA3-205ENST00000465471 PSMD4P55036 377 aaKnown RBP18.6■□□□□ 0.57
SKA3-205ENST00000465471 PPIAP62937 165 aaKnown RBP18.6■□□□□ 0.57
SKA3-205ENST00000465471 ESPL1Q14674 2120 aa18.6■□□□□ 0.57
SKA3-205ENST00000465471 METTL21CQ5VZV1 264 aa18.6■□□□□ 0.57
SKA3-205ENST00000465471 SLC22A16Q86VW1 577 aa18.6■□□□□ 0.57
SKA3-205ENST00000465471 CHERPQ8IWX8 916 aaKnown RBP18.6■□□□□ 0.57
SKA3-205ENST00000465471 TMEM251Q8N6I4 163 aa18.6■□□□□ 0.57
SKA3-205ENST00000465471 COX18Q8N8Q8 333 aa18.6■□□□□ 0.57
SKA3-205ENST00000465471 CDS1Q92903 461 aa18.6■□□□□ 0.57
SKA3-205ENST00000465471 VPS33AQ96AX1 596 aa18.6■□□□□ 0.57
SKA3-205ENST00000465471 OTUB1Q96FW1 271 aaPredicted RBP18.6■□□□□ 0.57
SKA3-205ENST00000465471 ZNF597Q96LX8 424 aa18.6■□□□□ 0.57
SKA3-205ENST00000465471 PANX1Q96RD7 426 aa18.6■□□□□ 0.57
SKA3-205ENST00000465471 BTBD2Q9BX70 525 aa18.6■□□□□ 0.57
SKA3-205ENST00000465471 METTL7AQ9H8H3 244 aa18.6■□□□□ 0.57
SKA3-205ENST00000465471 SEC14L3Q9UDX4 400 aa18.6■□□□□ 0.57
SKA3-205ENST00000465471 NPIPA1Q9UND3 350 aa18.6■□□□□ 0.57
SKA3-205ENST00000465471 FAF1Q9UNN5 650 aaPredicted RBP18.6■□□□□ 0.57
SKA3-205ENST00000465471 TRIM33Q9UPN9 1127 aa18.6■□□□□ 0.57
SKA3-205ENST00000465471 CCDC154A6NI56 674 aa18.59■□□□□ 0.57
SKA3-205ENST00000465471 FAM166BA8MTA8 275 aa18.59■□□□□ 0.57
SKA3-205ENST00000465471 ASNA1O43681 348 aa18.59■□□□□ 0.57
SKA3-205ENST00000465471 FADS1O60427 444 aa18.59■□□□□ 0.57
SKA3-205ENST00000465471 ICOSLGO75144 302 aa18.59■□□□□ 0.57
SKA3-205ENST00000465471 RFPL3SP0C7P2 107 aa18.59■□□□□ 0.57
SKA3-205ENST00000465471 PLGLB1Q02325 96 aa18.59■□□□□ 0.57
SKA3-205ENST00000465471 FAM109AQ8N4B1 249 aa18.59■□□□□ 0.57
SKA3-205ENST00000465471 OR52N2Q8NGI0 321 aa18.59■□□□□ 0.57
SKA3-205ENST00000465471 JADE3Q92613 823 aa18.59■□□□□ 0.57
SKA3-205ENST00000465471 SLC35G5Q96KT7 338 aa18.59■□□□□ 0.57
SKA3-205ENST00000465471 PHF12Q96QT6 1004 aa18.59■□□□□ 0.57
SKA3-205ENST00000465471 OR7D2Q96RA2 312 aa18.59■□□□□ 0.57
SKA3-205ENST00000465471 SLC35A5Q9BS91 424 aa18.59■□□□□ 0.57
SKA3-205ENST00000465471 UBQLN3Q9H347 655 aa18.59■□□□□ 0.57
SKA3-205ENST00000465471 GALNT9Q9HCQ5 603 aa18.59■□□□□ 0.57
SKA3-205ENST00000465471 SLC6A13Q9NSD5 602 aa18.59■□□□□ 0.57
SKA3-205ENST00000465471 FLRT3Q9NZU0 649 aa18.59■□□□□ 0.57
SKA3-205ENST00000465471 KLHL14Q9P2G3 628 aa18.59■□□□□ 0.57
SKA3-205ENST00000465471 ABCG2Q9UNQ0 655 aa18.59■□□□□ 0.57
SKA3-205ENST00000465471 HIVEP3Q5T1R4 2406 aa18.58■□□□□ 0.57
SKA3-205ENST00000465471 SNPHO15079 494 aa18.58■□□□□ 0.56
SKA3-205ENST00000465471 UNC5CO95185 931 aa18.58■□□□□ 0.56
SKA3-205ENST00000465471 IGHG3P01860 377 aa18.58■□□□□ 0.56
SKA3-205ENST00000465471 ZCCHC18P0CG32 403 aa18.58■□□□□ 0.56
SKA3-205ENST00000465471 CD1EP15812 388 aa18.58■□□□□ 0.56
SKA3-205ENST00000465471 HOXB9P17482 250 aaPredicted RBP18.58■□□□□ 0.56
SKA3-205ENST00000465471 LCN1P31025 176 aa18.58■□□□□ 0.56
SKA3-205ENST00000465471 EVI2BP34910 448 aa18.58■□□□□ 0.56
SKA3-205ENST00000465471 MAGEA5P43359 124 aa18.58■□□□□ 0.56
SKA3-205ENST00000465471 RPS26P62854 115 aaKnown RBP18.58■□□□□ 0.56
SKA3-205ENST00000465471 POU6F2P78424 691 aaPredicted RBP18.58■□□□□ 0.56
SKA3-205ENST00000465471 PACS2Q86VP3 889 aa18.58■□□□□ 0.56
SKA3-205ENST00000465471 TRIML2Q8N7C3 387 aa18.58■□□□□ 0.56
SKA3-205ENST00000465471 OR5D16Q8NGK9 328 aa18.58■□□□□ 0.56
SKA3-205ENST00000465471 ADAMTS15Q8TE58 950 aa18.58■□□□□ 0.56
SKA3-205ENST00000465471 GTF2H4Q92759 462 aa18.58■□□□□ 0.56
SKA3-205ENST00000465471 RABEP2Q9H5N1 569 aa18.58■□□□□ 0.56
SKA3-205ENST00000465471 RMND5AQ9H871 391 aa18.58■□□□□ 0.56
SKA3-205ENST00000465471 FBXO34Q9NWN3 711 aa18.58■□□□□ 0.56
SKA3-205ENST00000465471 QPCTLQ9NXS2 382 aa18.58■□□□□ 0.56
SKA3-205ENST00000465471 KLRF1Q9NZS2 232 aa18.58■□□□□ 0.56
SKA3-205ENST00000465471 HRH3Q9Y5N1 445 aa18.58■□□□□ 0.56
SKA3-205ENST00000465471 WIF1Q9Y5W5 379 aa18.58■□□□□ 0.56
SKA3-205ENST00000465471 KCNE3Q9Y6H6 103 aa18.58■□□□□ 0.56
SKA3-205ENST00000465471 RFXANKO14593 260 aa18.57■□□□□ 0.56
SKA3-205ENST00000465471 C1QCP02747 245 aa18.57■□□□□ 0.56
SKA3-205ENST00000465471 NGFRP08138 427 aa18.57■□□□□ 0.56
SKA3-205ENST00000465471 NCF2P19878 526 aaPredicted RBP18.57■□□□□ 0.56
SKA3-205ENST00000465471 CAPN3P20807 821 aa18.57■□□□□ 0.56
SKA3-205ENST00000465471 MATN1P21941 496 aa18.57■□□□□ 0.56
SKA3-205ENST00000465471 ELAVL4P26378 380 aaKnown RBP18.57■□□□□ 0.56
SKA3-205ENST00000465471 TRPC1P48995 793 aa18.57■□□□□ 0.56
SKA3-205ENST00000465471 ARFIP2P53365 341 aa18.57■□□□□ 0.56
SKA3-205ENST00000465471 KCNK10P57789 538 aa18.57■□□□□ 0.56
SKA3-205ENST00000465471 TIGD3Q6B0B8 471 aa18.57■□□□□ 0.56
SKA3-205ENST00000465471 FIGNL1Q6PIW4 674 aa18.57■□□□□ 0.56
SKA3-205ENST00000465471 GFRALQ6UXV0 394 aa18.57■□□□□ 0.56
SKA3-205ENST00000465471 FGD2Q7Z6J4 655 aa18.57■□□□□ 0.56
SKA3-205ENST00000465471 ZAR1Q86SH2 424 aa18.57■□□□□ 0.56
SKA3-205ENST00000465471 GHDCQ8N2G8 530 aa18.57■□□□□ 0.56
SKA3-205ENST00000465471 CHDHQ8NE62 594 aaPredicted RBP18.57■□□□□ 0.56
SKA3-205ENST00000465471 C10orf82Q8WW14 230 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms