RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 UMPSP11172 480 aa1.42□□□□□ -2.18
NUCKS1-202ENST00000464938 XRCC1P18887 633 aaPredicted RBP1.42□□□□□ -2.18
NUCKS1-202ENST00000464938 HTR2AP28223 471 aa1.42□□□□□ -2.18
NUCKS1-202ENST00000464938 CDH5P33151 784 aaPredicted RBP1.42□□□□□ -2.18
NUCKS1-202ENST00000464938 MDH1P40925 334 aaKnown RBP1.42□□□□□ -2.18
NUCKS1-202ENST00000464938 HTR5AP47898 357 aa1.42□□□□□ -2.18
NUCKS1-202ENST00000464938 KRT6CP48668 564 aa1.42□□□□□ -2.18
NUCKS1-202ENST00000464938 ARHGDIBP52566 201 aa1.42□□□□□ -2.18
NUCKS1-202ENST00000464938 GMFBP60983 142 aa1.42□□□□□ -2.18
NUCKS1-202ENST00000464938 CXCL6P80162 114 aa1.42□□□□□ -2.18
NUCKS1-202ENST00000464938 HSF2Q03933 536 aa1.42□□□□□ -2.18
NUCKS1-202ENST00000464938 SRYQ05066 204 aa1.42□□□□□ -2.18
NUCKS1-202ENST00000464938 EXOSC2Q13868 293 aaKnown RBP1.42□□□□□ -2.18
NUCKS1-202ENST00000464938 TFDP1Q14186 410 aa1.42□□□□□ -2.18
NUCKS1-202ENST00000464938 EIF2B1Q14232 305 aaKnown RBP1.42□□□□□ -2.18
NUCKS1-202ENST00000464938 RAB35Q15286 201 aa1.42□□□□□ -2.18
NUCKS1-202ENST00000464938 CAMK4Q16566 473 aa1.42□□□□□ -2.18
NUCKS1-202ENST00000464938 TIMM50Q3ZCQ8 353 aa1.42□□□□□ -2.18
NUCKS1-202ENST00000464938 LDLRAP1Q5SW96 308 aa1.42□□□□□ -2.18
NUCKS1-202ENST00000464938 ATAD3CQ5T2N8 411 aa1.42□□□□□ -2.18
NUCKS1-202ENST00000464938 LGSNQ5TDP6 509 aa1.42□□□□□ -2.18
NUCKS1-202ENST00000464938 OLFML2AQ68BL7 652 aa1.42□□□□□ -2.18
NUCKS1-202ENST00000464938 ZNF57Q68EA5 555 aaPredicted RBP1.42□□□□□ -2.18
NUCKS1-202ENST00000464938 PNCKQ6P2M8 343 aa1.42□□□□□ -2.18
NUCKS1-202ENST00000464938 NIPAL3Q6P499 406 aa1.42□□□□□ -2.18
NUCKS1-202ENST00000464938 LPCAT2Q7L5N7 544 aa1.42□□□□□ -2.18
NUCKS1-202ENST00000464938 CATSPER4Q7RTX7 472 aa1.42□□□□□ -2.18
NUCKS1-202ENST00000464938 ADCK1Q86TW2 530 aa1.42□□□□□ -2.18
NUCKS1-202ENST00000464938 HPS6Q86YV9 775 aa1.42□□□□□ -2.18
NUCKS1-202ENST00000464938 NAXDQ8IW45 347 aa1.42□□□□□ -2.18
NUCKS1-202ENST00000464938 GCNT2Q8N0V5 402 aa1.42□□□□□ -2.18
NUCKS1-202ENST00000464938 CENPSQ8N2Z9 138 aa1.42□□□□□ -2.18
NUCKS1-202ENST00000464938 SPEM1Q8N4L4 309 aa1.42□□□□□ -2.18
NUCKS1-202ENST00000464938 KLHL30-AS1Q8NEE0 82 aa1.42□□□□□ -2.18
NUCKS1-202ENST00000464938 OR5AU1Q8NGC0 362 aa1.42□□□□□ -2.18
NUCKS1-202ENST00000464938 OR52J3Q8NH60 311 aa1.42□□□□□ -2.18
NUCKS1-202ENST00000464938 ZNF671Q8TAW3 534 aa1.42□□□□□ -2.18
NUCKS1-202ENST00000464938 FCGR1BQ92637 280 aa1.42□□□□□ -2.18
NUCKS1-202ENST00000464938 C18orf25Q96B23 403 aaPredicted RBP1.42□□□□□ -2.18
NUCKS1-202ENST00000464938 VSTM2LQ96N03 204 aa1.42□□□□□ -2.18
NUCKS1-202ENST00000464938 GPA33Q99795 319 aa1.42□□□□□ -2.18
NUCKS1-202ENST00000464938 DPH7Q9BTV6 452 aa1.42□□□□□ -2.18
NUCKS1-202ENST00000464938 PAXXQ9BUH6 204 aa1.42□□□□□ -2.18
NUCKS1-202ENST00000464938 CARD6Q9BX69 1037 aa1.42□□□□□ -2.18
NUCKS1-202ENST00000464938 TBC1D10AQ9BXI6 508 aa1.42□□□□□ -2.18
NUCKS1-202ENST00000464938 COMMD4Q9H0A8 199 aa1.42□□□□□ -2.18
NUCKS1-202ENST00000464938 ACTR8Q9H981 624 aa1.42□□□□□ -2.18
NUCKS1-202ENST00000464938 LIN28AQ9H9Z2 209 aaKnown RBP1.42□□□□□ -2.18
NUCKS1-202ENST00000464938 VAT1LQ9HCJ6 419 aa1.42□□□□□ -2.18
NUCKS1-202ENST00000464938 POLE3Q9NRF9 147 aa1.42□□□□□ -2.18
NUCKS1-202ENST00000464938 YAE1D1Q9NRH1 226 aa1.42□□□□□ -2.18
NUCKS1-202ENST00000464938 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP1.42□□□□□ -2.18
NUCKS1-202ENST00000464938 DUS2Q9NX74 493 aaKnown RBP1.42□□□□□ -2.18
NUCKS1-202ENST00000464938 EHFQ9NZC4 300 aa1.42□□□□□ -2.18
NUCKS1-202ENST00000464938 EPS15L1Q9UBC2 864 aa1.42□□□□□ -2.18
NUCKS1-202ENST00000464938 B9D1Q9UPM9 204 aa1.42□□□□□ -2.18
NUCKS1-202ENST00000464938 NAALAD2Q9Y3Q0 740 aa1.42□□□□□ -2.18
NUCKS1-202ENST00000464938 ATP6V0A2Q9Y487 856 aa1.42□□□□□ -2.18
NUCKS1-202ENST00000464938 FKBP7Q9Y680 259 aa1.42□□□□□ -2.18
NUCKS1-202ENST00000464938 U3KQV3 271 aa1.42□□□□□ -2.18
NUCKS1-202ENST00000464938 CARMIL1Q5VZK9 1371 aa1.42□□□□□ -2.18
NUCKS1-202ENST00000464938 USP6P35125 1406 aa1.41□□□□□ -2.18
NUCKS1-202ENST00000464938 A0A087WZY1 265 aa1.41□□□□□ -2.18
NUCKS1-202ENST00000464938 FAM168BA1KXE4 195 aa1.41□□□□□ -2.18
NUCKS1-202ENST00000464938 TRABD2BA6NFA1 517 aa1.41□□□□□ -2.18
NUCKS1-202ENST00000464938 FRG2CA6NGY1 282 aa1.41□□□□□ -2.18
NUCKS1-202ENST00000464938 LRRC30A6NM36 301 aa1.41□□□□□ -2.18
NUCKS1-202ENST00000464938 ERI2A8K979 691 aaKnown RBP1.41□□□□□ -2.18
NUCKS1-202ENST00000464938 A8MX80 341 aa1.41□□□□□ -2.18
NUCKS1-202ENST00000464938 G3V3Y1 287 aa1.41□□□□□ -2.18
NUCKS1-202ENST00000464938 K7ENP7 123 aa1.41□□□□□ -2.18
NUCKS1-202ENST00000464938 K7EPI3 171 aa1.41□□□□□ -2.18
NUCKS1-202ENST00000464938 CLDN3O15551 220 aa1.41□□□□□ -2.18
NUCKS1-202ENST00000464938 LRRTM2O43300 516 aa1.41□□□□□ -2.18
NUCKS1-202ENST00000464938 PPIHO43447 177 aaKnown RBP1.41□□□□□ -2.18
NUCKS1-202ENST00000464938 B3GALNT1O75752 331 aa1.41□□□□□ -2.18
NUCKS1-202ENST00000464938 RHBDL1O75783 438 aa1.41□□□□□ -2.18
NUCKS1-202ENST00000464938 OR4F21O95013 312 aa1.41□□□□□ -2.18
NUCKS1-202ENST00000464938 DUSP14O95147 198 aaKnown RBP1.41□□□□□ -2.18
NUCKS1-202ENST00000464938 KRT8P05787 483 aa1.41□□□□□ -2.18
NUCKS1-202ENST00000464938 ANXA4P09525 319 aaPredicted RBP1.41□□□□□ -2.18
NUCKS1-202ENST00000464938 ALPIP09923 528 aa1.41□□□□□ -2.18
NUCKS1-202ENST00000464938 THRBP10828 461 aa1.41□□□□□ -2.18
NUCKS1-202ENST00000464938 BCKDHAP12694 445 aa1.41□□□□□ -2.18
NUCKS1-202ENST00000464938 UQCRBP14927 111 aa1.41□□□□□ -2.18
NUCKS1-202ENST00000464938 TSPAN8P19075 237 aa1.41□□□□□ -2.18
NUCKS1-202ENST00000464938 IGHV1-2P23083 117 aa1.41□□□□□ -2.18
NUCKS1-202ENST00000464938 CYLC1P35663 651 aaPredicted RBP1.41□□□□□ -2.18
NUCKS1-202ENST00000464938 HMGCLP35914 325 aa1.41□□□□□ -2.18
NUCKS1-202ENST00000464938 RPL4P36578 427 aaKnown RBP1.41□□□□□ -2.18
NUCKS1-202ENST00000464938 ACAA2P42765 397 aaKnown RBP1.41□□□□□ -2.18
NUCKS1-202ENST00000464938 PTGFRP43088 359 aa1.41□□□□□ -2.18
NUCKS1-202ENST00000464938 ACADVLP49748 655 aa1.41□□□□□ -2.18
NUCKS1-202ENST00000464938 EMDP50402 254 aa1.41□□□□□ -2.18
NUCKS1-202ENST00000464938 IST1P53990 364 aa1.41□□□□□ -2.18
NUCKS1-202ENST00000464938 RIPPLY3P57055 190 aa1.41□□□□□ -2.18
NUCKS1-202ENST00000464938 NOP14P78316 857 aaKnown RBP1.41□□□□□ -2.18
NUCKS1-202ENST00000464938 IL18R1Q13478 541 aa1.41□□□□□ -2.18
NUCKS1-202ENST00000464938 CRMP1Q14194 572 aa1.41□□□□□ -2.18
NUCKS1-202ENST00000464938 UBE2V2Q15819 145 aa1.41□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms