RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 DOCK6Q96HP0 2047 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 TRAV6A0A075B6T7 132 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 GPR171O14626 319 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 PRRG1O14668 218 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 GRM6O15303 877 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 PI15O43692 258 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 SNAPC5O75971 98 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 MPC2O95563 127 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 F8A1P23610 371 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 DNASE1P24855 282 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 FPR3P25089 353 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 BSGP35613 385 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 ETV3P41162 512 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 ANXA11P50995 505 aaKnown RBP6.85□□□□□ -1.31
USP48-206ENST00000464577 LSM11P83369 360 aaKnown RBP eCLIP6.85□□□□□ -1.31
USP48-206ENST00000464577 MEF2AQ02078 507 aaPredicted RBP6.85□□□□□ -1.31
USP48-206ENST00000464577 FZD5Q13467 585 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 GNA13Q14344 377 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 PGGHGQ32M88 737 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 TJAP1Q5JTD0 557 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 KHDRBS2Q5VWX1 349 aaKnown RBP6.85□□□□□ -1.31
USP48-206ENST00000464577 FAAH2Q6GMR7 532 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 CDC73Q6P1J9 531 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 BAIAP2L2Q6UXY1 529 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 PRSS42Q7Z5A4 293 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 TECPR1Q7Z6L1 1165 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 FAM129CQ86XR2 697 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 CHST14Q8NCH0 376 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 LSM14AQ8ND56 463 aaKnown RBP6.85□□□□□ -1.31
USP48-206ENST00000464577 TOR1AIP2Q8NFQ8 470 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 OR4Q3Q8NH05 313 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 OR8K5Q8NH50 307 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 PIGXQ8TBF5 258 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 ZNF689Q96CS4 500 aaPredicted RBP6.85□□□□□ -1.31
USP48-206ENST00000464577 RBP7Q96R05 134 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 ARHGDIGQ99819 225 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 DPCDQ9BVM2 203 aaPredicted RBP6.85□□□□□ -1.31
USP48-206ENST00000464577 MS4A8Q9BY19 250 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 FAM117AQ9C073 453 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 ACTR6Q9GZN1 396 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 DLL4Q9NR61 685 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 UCKL1Q9NWZ5 548 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 ZNF224Q9NZL3 707 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 TNFRSF10DQ9UBN6 386 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 PRKAG2Q9UGJ0 569 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 LRFN2Q9ULH4 789 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 ZFR2Q9UPR6 939 aaKnown RBP6.85□□□□□ -1.31
USP48-206ENST00000464577 MAB21L2Q9Y586 359 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 NUP210Q8TEM1 1887 aaPredicted RBP6.84□□□□□ -1.31
USP48-206ENST00000464577 A0A0G2JPF8 293 aa6.84□□□□□ -1.31
USP48-206ENST00000464577 HNRNPCL2B2RXH8 293 aa6.84□□□□□ -1.31
USP48-206ENST00000464577 HNRNPCL3B7ZW38 293 aa6.84□□□□□ -1.31
USP48-206ENST00000464577 KHNYNO15037 678 aaKnown RBP6.84□□□□□ -1.31
USP48-206ENST00000464577 HMGN1P05114 100 aa6.84□□□□□ -1.31
USP48-206ENST00000464577 HNRNPCL4P0DMR1 293 aa6.84□□□□□ -1.31
USP48-206ENST00000464577 CXCL3P19876 107 aa6.84□□□□□ -1.31
USP48-206ENST00000464577 C4BPBP20851 252 aa6.84□□□□□ -1.31
USP48-206ENST00000464577 ZP3P21754 424 aa6.84□□□□□ -1.31
USP48-206ENST00000464577 PBLDP30039 288 aaPredicted RBP6.84□□□□□ -1.31
USP48-206ENST00000464577 TRIM23P36406 574 aa6.84□□□□□ -1.31
USP48-206ENST00000464577 OMPP47874 163 aa6.84□□□□□ -1.31
USP48-206ENST00000464577 ZNF81P51508 661 aa6.84□□□□□ -1.31
USP48-206ENST00000464577 GBX2P52951 348 aaPredicted RBP6.84□□□□□ -1.31
USP48-206ENST00000464577 PITPNAQ00169 270 aa6.84□□□□□ -1.31
USP48-206ENST00000464577 PUDPQ08623 228 aa6.84□□□□□ -1.31
USP48-206ENST00000464577 MAP4K2Q12851 820 aa6.84□□□□□ -1.31
USP48-206ENST00000464577 TMEM115Q12893 351 aaPredicted RBP6.84□□□□□ -1.31
USP48-206ENST00000464577 TSTA3Q13630 321 aaPredicted RBP6.84□□□□□ -1.31
USP48-206ENST00000464577 FGFBP1Q14512 234 aa6.84□□□□□ -1.31
USP48-206ENST00000464577 ZNF267Q14586 743 aaPredicted RBP6.84□□□□□ -1.31
USP48-206ENST00000464577 INSL4Q14641 139 aa6.84□□□□□ -1.31
USP48-206ENST00000464577 GSG1Q2KHT4 349 aa6.84□□□□□ -1.31
USP48-206ENST00000464577 PRAMEF14Q5SWL7 426 aa6.84□□□□□ -1.31
USP48-206ENST00000464577 PRAMEF13Q5VWM6 474 aa6.84□□□□□ -1.31
USP48-206ENST00000464577 SFXN4Q6P4A7 337 aa6.84□□□□□ -1.31
USP48-206ENST00000464577 TMEM220Q6QAJ8 160 aa6.84□□□□□ -1.31
USP48-206ENST00000464577 TMEM64Q6YI46 380 aa6.84□□□□□ -1.31
USP48-206ENST00000464577 BTN2A1Q7KYR7 527 aa6.84□□□□□ -1.31
USP48-206ENST00000464577 DPPA4Q7L190 304 aa6.84□□□□□ -1.31
USP48-206ENST00000464577 KLBQ86Z14 1044 aa6.84□□□□□ -1.31
USP48-206ENST00000464577 GID4Q8IVV7 300 aa6.84□□□□□ -1.31
USP48-206ENST00000464577 SAMD12Q8N8I0 201 aa6.84□□□□□ -1.31
USP48-206ENST00000464577 UXS1Q8NBZ7 420 aa6.84□□□□□ -1.31
USP48-206ENST00000464577 ZNF740Q8NDX6 193 aa6.84□□□□□ -1.31
USP48-206ENST00000464577 SFXN5Q8TD22 340 aa6.84□□□□□ -1.31
USP48-206ENST00000464577 MRPS31Q92665 395 aaKnown RBP6.84□□□□□ -1.31
USP48-206ENST00000464577 RBPMSQ93062 196 aaKnown RBP6.84□□□□□ -1.31
USP48-206ENST00000464577 AHCYL2Q96HN2 611 aaKnown RBP6.84□□□□□ -1.31
USP48-206ENST00000464577 GSX2Q9BZM3 304 aa6.84□□□□□ -1.31
USP48-206ENST00000464577 PELI2Q9HAT8 420 aa6.84□□□□□ -1.31
USP48-206ENST00000464577 IL21Q9HBE4 155 aa6.84□□□□□ -1.31
USP48-206ENST00000464577 ZNF334Q9HCZ1 680 aaPredicted RBP6.84□□□□□ -1.31
USP48-206ENST00000464577 C12orf4Q9NQ89 552 aa6.84□□□□□ -1.31
USP48-206ENST00000464577 EVA1BQ9NVM1 165 aa6.84□□□□□ -1.31
USP48-206ENST00000464577 MED9Q9NWA0 146 aa6.84□□□□□ -1.31
USP48-206ENST00000464577 BABAM2Q9NXR7 383 aa6.84□□□□□ -1.31
USP48-206ENST00000464577 CFAP97Q9P2B7 532 aa6.84□□□□□ -1.31
USP48-206ENST00000464577 RGS17Q9UGC6 210 aaPredicted RBP6.84□□□□□ -1.31
USP48-206ENST00000464577 ADAM29Q9UKF5 820 aa6.84□□□□□ -1.31
USP48-206ENST00000464577 RASD1Q9Y272 281 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms