RNA–Protein interactions for RNA: ENST00000464313.1

PTPN12-210, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-210ENST00000464313 LCE1CQ5T751 118 aa3□□□□□ -1.93
PTPN12-210ENST00000464313 LCE1BQ5T7P3 118 aa3□□□□□ -1.93
PTPN12-210ENST00000464313 LGSNQ5TDP6 509 aa3□□□□□ -1.93
PTPN12-210ENST00000464313 RAET1GQ6H3X3 334 aa3□□□□□ -1.93
PTPN12-210ENST00000464313 RBM43Q6ZSC3 357 aaKnown RBP3□□□□□ -1.93
PTPN12-210ENST00000464313 Q7L0L9 218 aa3□□□□□ -1.93
PTPN12-210ENST00000464313 ERASQ7Z444 233 aa3□□□□□ -1.93
PTPN12-210ENST00000464313 NET1Q7Z628 596 aaPredicted RBP3□□□□□ -1.93
PTPN12-210ENST00000464313 ERICH1Q86X53 443 aa3□□□□□ -1.93
PTPN12-210ENST00000464313 C11orf53Q8IXP5 236 aa3□□□□□ -1.93
PTPN12-210ENST00000464313 GPR65Q8IYL9 337 aa3□□□□□ -1.93
PTPN12-210ENST00000464313 C11orf42Q8N5U0 333 aa3□□□□□ -1.93
PTPN12-210ENST00000464313 FAM71CQ8NEG0 241 aa3□□□□□ -1.93
PTPN12-210ENST00000464313 TADA1Q96BN2 335 aa3□□□□□ -1.93
PTPN12-210ENST00000464313 VSIG2Q96IQ7 327 aa3□□□□□ -1.93
PTPN12-210ENST00000464313 CASD1Q96PB1 797 aa3□□□□□ -1.93
PTPN12-210ENST00000464313 WRAP53Q9BUR4 548 aaKnown RBP3□□□□□ -1.93
PTPN12-210ENST00000464313 SLITRK2Q9H156 845 aa3□□□□□ -1.93
PTPN12-210ENST00000464313 TRPV5Q9NQA5 729 aa3□□□□□ -1.93
PTPN12-210ENST00000464313 C1orf123Q9NWV4 160 aa3□□□□□ -1.93
PTPN12-210ENST00000464313 KLRF1Q9NZS2 232 aa3□□□□□ -1.93
PTPN12-210ENST00000464313 SENP1Q9P0U3 644 aa3□□□□□ -1.93
PTPN12-210ENST00000464313 EXOSC1Q9Y3B2 195 aaKnown RBP3□□□□□ -1.93
PTPN12-210ENST00000464313 TRBV7-9A0A0J9YWB2 115 aa2.99□□□□□ -1.93
PTPN12-210ENST00000464313 KLF18A0A0U1RQI7 1052 aa2.99□□□□□ -1.93
PTPN12-210ENST00000464313 E9PMD0 336 aa2.99□□□□□ -1.93
PTPN12-210ENST00000464313 SGK494L7N484 410 aa2.99□□□□□ -1.93
PTPN12-210ENST00000464313 SLC17A2O00624 439 aa2.99□□□□□ -1.93
PTPN12-210ENST00000464313 PDXKO00764 312 aa2.99□□□□□ -1.93
PTPN12-210ENST00000464313 CASKO14936 926 aa2.99□□□□□ -1.93
PTPN12-210ENST00000464313 NOL4O94818 638 aa2.99□□□□□ -1.93
PTPN12-210ENST00000464313 CA3P07451 260 aa2.99□□□□□ -1.93
PTPN12-210ENST00000464313 IL10P22301 178 aa2.99□□□□□ -1.93
PTPN12-210ENST00000464313 GMFBP60983 142 aa2.99□□□□□ -1.93
PTPN12-210ENST00000464313 PUDPQ08623 228 aa2.99□□□□□ -1.93
PTPN12-210ENST00000464313 EXOSC2Q13868 293 aaKnown RBP2.99□□□□□ -1.93
PTPN12-210ENST00000464313 SERTAD2Q14140 314 aa2.99□□□□□ -1.93
PTPN12-210ENST00000464313 TFDP1Q14186 410 aa2.99□□□□□ -1.93
PTPN12-210ENST00000464313 TMEM52BQ4KMG9 183 aa2.99□□□□□ -1.93
PTPN12-210ENST00000464313 C2orf66Q6UXQ4 117 aa2.99□□□□□ -1.93
PTPN12-210ENST00000464313 LPCAT2Q7L5N7 544 aa2.99□□□□□ -1.93
PTPN12-210ENST00000464313 MCOLN2Q8IZK6 566 aa2.99□□□□□ -1.93
PTPN12-210ENST00000464313 BCORP1Q8N888 145 aa2.99□□□□□ -1.93
PTPN12-210ENST00000464313 NFAM1Q8NET5 270 aaPredicted RBP2.99□□□□□ -1.93
PTPN12-210ENST00000464313 OR52B4Q8NGK2 314 aa2.99□□□□□ -1.93
PTPN12-210ENST00000464313 C14orf79Q96F83 325 aa2.99□□□□□ -1.93
PTPN12-210ENST00000464313 OR5M11Q96RB7 305 aa2.99□□□□□ -1.93
PTPN12-210ENST00000464313 TBC1D10AQ9BXI6 508 aa2.99□□□□□ -1.93
PTPN12-210ENST00000464313 RPAP3Q9H6T3 665 aaPredicted RBP2.99□□□□□ -1.93
PTPN12-210ENST00000464313 GPN2Q9H9Y4 310 aaPredicted RBP2.99□□□□□ -1.93
PTPN12-210ENST00000464313 ZNF275Q9NSD4 429 aaPredicted RBP2.99□□□□□ -1.93
PTPN12-210ENST00000464313 ELOVL2Q9NXB9 296 aa2.99□□□□□ -1.93
PTPN12-210ENST00000464313 FOXJ3Q9UPW0 622 aa2.99□□□□□ -1.93
PTPN12-210ENST00000464313 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.99□□□□□ -1.93
PTPN12-210ENST00000464313 ADAMTS9Q9P2N4 1935 aa2.99□□□□□ -1.93
PTPN12-210ENST00000464313 METP08581 1390 aa2.99□□□□□ -1.93
PTPN12-210ENST00000464313 A0A0U1RQV5 110 aa2.98□□□□□ -1.93
PTPN12-210ENST00000464313 FAM230AA0A1W2PPH8 454 aa2.98□□□□□ -1.93
PTPN12-210ENST00000464313 H3BTX0 84 aa2.98□□□□□ -1.93
PTPN12-210ENST00000464313 PPIHO43447 177 aaKnown RBP2.98□□□□□ -1.93
PTPN12-210ENST00000464313 LANCL1O43813 399 aa2.98□□□□□ -1.93
PTPN12-210ENST00000464313 APBB3O95704 486 aa2.98□□□□□ -1.93
PTPN12-210ENST00000464313 JCHAINP01591 159 aa2.98□□□□□ -1.93
PTPN12-210ENST00000464313 IGHV1-2P23083 117 aa2.98□□□□□ -1.93
PTPN12-210ENST00000464313 XCR1P46094 333 aa2.98□□□□□ -1.93
PTPN12-210ENST00000464313 IL9RQ01113 521 aa2.98□□□□□ -1.93
PTPN12-210ENST00000464313 PLOD1Q02809 727 aaPredicted RBP2.98□□□□□ -1.93
PTPN12-210ENST00000464313 ASAH1Q13510 395 aa2.98□□□□□ -1.93
PTPN12-210ENST00000464313 ADPRMQ3LIE5 342 aa2.98□□□□□ -1.93
PTPN12-210ENST00000464313 ZNF57Q68EA5 555 aaPredicted RBP2.98□□□□□ -1.93
PTPN12-210ENST00000464313 BTNL3Q6UXE8 466 aa2.98□□□□□ -1.93
PTPN12-210ENST00000464313 CERS5Q8N5B7 392 aa2.98□□□□□ -1.93
PTPN12-210ENST00000464313 ZNF525Q8N782 197 aa2.98□□□□□ -1.93
PTPN12-210ENST00000464313 CNNM3Q8NE01 707 aa2.98□□□□□ -1.93
PTPN12-210ENST00000464313 CCDC26Q8TAB7 109 aa2.98□□□□□ -1.93
PTPN12-210ENST00000464313 ADAMTS16Q8TE57 1224 aa2.98□□□□□ -1.93
PTPN12-210ENST00000464313 KCNK16Q96T55 309 aa2.98□□□□□ -1.93
PTPN12-210ENST00000464313 PAXXQ9BUH6 204 aa2.98□□□□□ -1.93
PTPN12-210ENST00000464313 ELOVL4Q9GZR5 314 aa2.98□□□□□ -1.93
PTPN12-210ENST00000464313 OPN3Q9H1Y3 402 aaPredicted RBP2.98□□□□□ -1.93
PTPN12-210ENST00000464313 EXOSC3Q9NQT5 275 aaKnown RBP2.98□□□□□ -1.93
PTPN12-210ENST00000464313 UTP6Q9NYH9 597 aaKnown RBP2.98□□□□□ -1.93
PTPN12-210ENST00000464313 HOOK1Q9UJC3 728 aaKnown RBP2.98□□□□□ -1.93
PTPN12-210ENST00000464313 DUSP12Q9UNI6 340 aa2.98□□□□□ -1.93
PTPN12-210ENST00000464313 CROCCQ5TZA2 2017 aa2.98□□□□□ -1.93
PTPN12-210ENST00000464313 ZNF318Q5VUA4 2279 aa2.97□□□□□ -1.93
PTPN12-210ENST00000464313 ZSCAN5BA6NJL1 495 aa2.97□□□□□ -1.93
PTPN12-210ENST00000464313 LRRC30A6NM36 301 aa2.97□□□□□ -1.93
PTPN12-210ENST00000464313 TM9SF1O15321 606 aa2.97□□□□□ -1.93
PTPN12-210ENST00000464313 TOM1L1O75674 476 aa2.97□□□□□ -1.93
PTPN12-210ENST00000464313 AKR7A3O95154 331 aa2.97□□□□□ -1.93
PTPN12-210ENST00000464313 RRASP10301 218 aa2.97□□□□□ -1.93
PTPN12-210ENST00000464313 PAICSP22234 425 aaKnown RBP2.97□□□□□ -1.93
PTPN12-210ENST00000464313 DNAJB1P25685 340 aa2.97□□□□□ -1.93
PTPN12-210ENST00000464313 RPL4P36578 427 aaKnown RBP2.97□□□□□ -1.93
PTPN12-210ENST00000464313 MEOX2P50222 304 aa2.97□□□□□ -1.93
PTPN12-210ENST00000464313 IGLV3-21P80748 117 aaPredicted RBP2.97□□□□□ -1.93
PTPN12-210ENST00000464313 NDPQ00604 133 aa2.97□□□□□ -1.93
PTPN12-210ENST00000464313 CD47Q08722 323 aa2.97□□□□□ -1.93
PTPN12-210ENST00000464313 CDKN3Q16667 212 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms