RNA–Protein interactions for RNA: ENST00000463407.5

NUP58-206, Transcript of nucleoporin 58, humanhuman

TSL 1 (best) BASIC

Gene NUP58, Length 6,360 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-206ENST00000463407 GCH1P30793 250 aa12.1□□□□□ -0.47
NUP58-206ENST00000463407 CSNK2A1P68400 391 aaPredicted RBP12.1□□□□□ -0.47
NUP58-206ENST00000463407 APOFQ13790 326 aa12.1□□□□□ -0.47
NUP58-206ENST00000463407 MFSD13AQ14CX5 517 aa12.1□□□□□ -0.47
NUP58-206ENST00000463407 PTPRRQ15256 657 aa12.1□□□□□ -0.47
NUP58-206ENST00000463407 ZNF77Q15935 545 aa12.1□□□□□ -0.47
NUP58-206ENST00000463407 CHRFAM7AQ494W8 412 aa12.1□□□□□ -0.47
NUP58-206ENST00000463407 LIPKQ5VXJ0 399 aa12.1□□□□□ -0.47
NUP58-206ENST00000463407 TRAPPC6BQ86SZ2 158 aa12.1□□□□□ -0.47
NUP58-206ENST00000463407 OR2T4Q8NH00 348 aa12.1□□□□□ -0.47
NUP58-206ENST00000463407 SNIP1Q8TAD8 396 aaKnown RBP12.1□□□□□ -0.47
NUP58-206ENST00000463407 TBC1D20Q96BZ9 403 aa12.1□□□□□ -0.47
NUP58-206ENST00000463407 WBP1LQ9NX94 342 aa12.1□□□□□ -0.47
NUP58-206ENST00000463407 CCDC59Q9P031 241 aaKnown RBP12.1□□□□□ -0.47
NUP58-206ENST00000463407 PTBP2Q9UKA9 531 aaKnown RBP12.1□□□□□ -0.47
NUP58-206ENST00000463407 BAIAP2Q9UQB8 552 aa12.1□□□□□ -0.47
NUP58-206ENST00000463407 H0YJX3 145 aa12.1□□□□□ -0.47
NUP58-206ENST00000463407 SRPX2O60687 465 aaPredicted RBP12.1□□□□□ -0.47
NUP58-206ENST00000463407 ATXN1LP0C7T5 689 aaKnown RBP12.1□□□□□ -0.47
NUP58-206ENST00000463407 PVALBP20472 110 aaPredicted RBP12.1□□□□□ -0.47
NUP58-206ENST00000463407 VAMP1P23763 118 aa12.1□□□□□ -0.47
NUP58-206ENST00000463407 TMEM53Q6P2H8 277 aa12.1□□□□□ -0.47
NUP58-206ENST00000463407 ADAMTSL4Q6UY14 1074 aa12.1□□□□□ -0.47
NUP58-206ENST00000463407 HS3ST5Q8IZT8 346 aa12.1□□□□□ -0.47
NUP58-206ENST00000463407 DENND6BQ8NEG7 585 aa12.1□□□□□ -0.47
NUP58-206ENST00000463407 FKBP10Q96AY3 582 aa12.1□□□□□ -0.47
NUP58-206ENST00000463407 MYADMQ96S97 322 aa12.1□□□□□ -0.47
NUP58-206ENST00000463407 ADOQ96SZ5 270 aa12.1□□□□□ -0.47
NUP58-206ENST00000463407 SEC14L4Q9UDX3 406 aa12.1□□□□□ -0.47
NUP58-206ENST00000463407 CBLCQ9ULV8 474 aa12.1□□□□□ -0.47
NUP58-206ENST00000463407 BOKQ9UMX3 212 aaPredicted RBP12.1□□□□□ -0.47
NUP58-206ENST00000463407 TMA7Q9Y2S6 64 aaKnown RBP12.1□□□□□ -0.47
NUP58-206ENST00000463407 ADAM18Q9Y3Q7 739 aa12.1□□□□□ -0.47
NUP58-206ENST00000463407 HS3ST3A1Q9Y663 406 aa12.1□□□□□ -0.47
NUP58-206ENST00000463407 RNASET2O00584 256 aaKnown RBP12.09□□□□□ -0.47
NUP58-206ENST00000463407 LINC01565O15544 149 aa12.09□□□□□ -0.47
NUP58-206ENST00000463407 FGF4P08620 206 aa12.09□□□□□ -0.47
NUP58-206ENST00000463407 GKN3PP0CG01 181 aa12.09□□□□□ -0.47
NUP58-206ENST00000463407 TNFRSF1BP20333 461 aa12.09□□□□□ -0.47
NUP58-206ENST00000463407 MAGEA6P43360 314 aa12.09□□□□□ -0.47
NUP58-206ENST00000463407 ZNF829Q3KNS6 432 aaPredicted RBP12.09□□□□□ -0.47
NUP58-206ENST00000463407 ANKDD1AQ495B1 522 aa12.09□□□□□ -0.47
NUP58-206ENST00000463407 FCRLBQ6BAA4 426 aa12.09□□□□□ -0.47
NUP58-206ENST00000463407 TMED4Q7Z7H5 227 aa12.09□□□□□ -0.47
NUP58-206ENST00000463407 LHFPL3Q86UP9 236 aa12.09□□□□□ -0.47
NUP58-206ENST00000463407 ANTXRLA6NF34 631 aa12.09□□□□□ -0.47
NUP58-206ENST00000463407 SLC22A31A6NKX4 558 aa12.09□□□□□ -0.47
NUP58-206ENST00000463407 CCRL2O00421 344 aa12.09□□□□□ -0.47
NUP58-206ENST00000463407 PHYHO14832 338 aa12.09□□□□□ -0.47
NUP58-206ENST00000463407 KLKB1P03952 638 aa12.09□□□□□ -0.47
NUP58-206ENST00000463407 CCL11P51671 97 aa12.09□□□□□ -0.47
NUP58-206ENST00000463407 OR1D5P58170 312 aa12.09□□□□□ -0.47
NUP58-206ENST00000463407 C3orf33Q6P1S2 294 aa12.09□□□□□ -0.47
NUP58-206ENST00000463407 WDR53Q7Z5U6 358 aaPredicted RBP12.09□□□□□ -0.47
NUP58-206ENST00000463407 LMNTD1Q8N9Z9 388 aa12.09□□□□□ -0.47
NUP58-206ENST00000463407 SPEF1Q9Y4P9 236 aa12.09□□□□□ -0.47
NUP58-206ENST00000463407 CACNA1SQ13698 1873 aa12.09□□□□□ -0.47
NUP58-206ENST00000463407 RPS17P08708 135 aaKnown RBP12.09□□□□□ -0.47
NUP58-206ENST00000463407 CD3GP09693 182 aa12.09□□□□□ -0.47
NUP58-206ENST00000463407 ACTA2P62736 377 aa12.09□□□□□ -0.47
NUP58-206ENST00000463407 ACTG2P63267 376 aa12.09□□□□□ -0.47
NUP58-206ENST00000463407 TUBA3EQ6PEY2 450 aa12.09□□□□□ -0.47
NUP58-206ENST00000463407 RFLNAQ6ZTI6 216 aa12.09□□□□□ -0.47
NUP58-206ENST00000463407 OR51B6Q9H340 312 aa12.09□□□□□ -0.47
NUP58-206ENST00000463407 IL20RAQ9UHF4 553 aa12.09□□□□□ -0.47
NUP58-206ENST00000463407 BTNL2Q9UIR0 455 aa12.09□□□□□ -0.47
NUP58-206ENST00000463407 RBMX2Q9Y388 322 aaKnown RBP12.09□□□□□ -0.47
NUP58-206ENST00000463407 MYH10P35580 1976 aa12.09□□□□□ -0.47
NUP58-206ENST00000463407 TRBV2A0A0J9YWF9 115 aa12.09□□□□□ -0.47
NUP58-206ENST00000463407 HHLA1C9JL84 531 aa12.09□□□□□ -0.47
NUP58-206ENST00000463407 SLC19A2O60779 497 aa12.09□□□□□ -0.47
NUP58-206ENST00000463407 OR7A10O76100 309 aa12.09□□□□□ -0.47
NUP58-206ENST00000463407 FESP07332 822 aa12.09□□□□□ -0.47
NUP58-206ENST00000463407 THBS2P35442 1172 aa12.09□□□□□ -0.47
NUP58-206ENST00000463407 DAP3P51398 398 aaKnown RBP12.09□□□□□ -0.47
NUP58-206ENST00000463407 NPRL3Q12980 569 aa12.09□□□□□ -0.47
NUP58-206ENST00000463407 GTDC1Q4AE62 458 aa12.09□□□□□ -0.47
NUP58-206ENST00000463407 ATAD3CQ5T2N8 411 aa12.09□□□□□ -0.47
NUP58-206ENST00000463407 PGBD5Q8N414 524 aa12.09□□□□□ -0.47
NUP58-206ENST00000463407 MINDY2Q8NBR6 621 aa12.09□□□□□ -0.47
NUP58-206ENST00000463407 ASB11Q8WXH4 323 aa12.09□□□□□ -0.47
NUP58-206ENST00000463407 PCDHGB6Q9Y5F9 930 aa12.09□□□□□ -0.47
NUP58-206ENST00000463407 PCDHA9Q9Y5H5 950 aa12.09□□□□□ -0.47
NUP58-206ENST00000463407 MYH9P35579 1960 aaKnown RBP12.09□□□□□ -0.47
NUP58-206ENST00000463407 LTBP4Q8N2S1 1624 aa12.09□□□□□ -0.47
NUP58-206ENST00000463407 LOC102723532A0A0G2JNH3 316 aa12.09□□□□□ -0.47
NUP58-206ENST00000463407 C17orf113A0A1B0GUU1 675 aa12.09□□□□□ -0.47
NUP58-206ENST00000463407 YY2O15391 372 aa12.09□□□□□ -0.47
NUP58-206ENST00000463407 CELP19835 753 aa12.09□□□□□ -0.47
NUP58-206ENST00000463407 METTL2BQ6P1Q9 378 aaKnown RBP12.09□□□□□ -0.47
NUP58-206ENST00000463407 OPN5Q6U736 354 aa12.09□□□□□ -0.47
NUP58-206ENST00000463407 SPTSSAQ969W0 71 aa12.09□□□□□ -0.47
NUP58-206ENST00000463407 UTP23Q9BRU9 249 aaKnown RBP12.09□□□□□ -0.47
NUP58-206ENST00000463407 WACQ9BTA9 647 aa12.09□□□□□ -0.47
NUP58-206ENST00000463407 FAM118AQ9NWS6 357 aa12.09□□□□□ -0.47
NUP58-206ENST00000463407 BPNT1O95861 308 aa12.08□□□□□ -0.47
NUP58-206ENST00000463407 BMP1P13497 986 aa12.08□□□□□ -0.47
NUP58-206ENST00000463407 OR5M10Q6IEU7 315 aa12.08□□□□□ -0.47
NUP58-206ENST00000463407 C12orf43Q96C57 262 aaKnown RBP12.08□□□□□ -0.47
NUP58-206ENST00000463407 DPH1Q9BZG8 443 aa12.08□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms