RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 IL4I1Q96RQ9 567 aa11.93□□□□□ -0.5
VAPB-203ENST00000463370 PHOX2BQ99453 314 aa11.93□□□□□ -0.5
VAPB-203ENST00000463370 COPS4Q9BT78 406 aa11.93□□□□□ -0.5
VAPB-203ENST00000463370 POLR2J3Q9H1A7 115 aaKnown RBP11.93□□□□□ -0.5
VAPB-203ENST00000463370 DUSP15Q9H1R2 295 aaPredicted RBP11.93□□□□□ -0.5
VAPB-203ENST00000463370 ACOT13Q9NPJ3 140 aa11.93□□□□□ -0.5
VAPB-203ENST00000463370 PLCL2Q9UPR0 1127 aa11.93□□□□□ -0.5
VAPB-203ENST00000463370 MAU2Q9Y6X3 613 aa11.93□□□□□ -0.5
VAPB-203ENST00000463370 TRIM64BA6NI03 449 aa11.92□□□□□ -0.5
VAPB-203ENST00000463370 AGAP5A6NIR3 686 aa11.92□□□□□ -0.5
VAPB-203ENST00000463370 FOXD2O60548 495 aaPredicted RBP11.92□□□□□ -0.5
VAPB-203ENST00000463370 LCKP06239 509 aa11.92□□□□□ -0.5
VAPB-203ENST00000463370 ALOX5P09917 674 aa11.92□□□□□ -0.5
VAPB-203ENST00000463370 GABRA3P34903 492 aa11.92□□□□□ -0.5
VAPB-203ENST00000463370 RGS8P57771 180 aaPredicted RBP11.92□□□□□ -0.5
VAPB-203ENST00000463370 SMIM11AP58511 58 aa11.92□□□□□ -0.5
VAPB-203ENST00000463370 PLAURQ03405 335 aa11.92□□□□□ -0.5
VAPB-203ENST00000463370 OCA2Q04671 838 aa11.92□□□□□ -0.5
VAPB-203ENST00000463370 ILKQ13418 452 aa11.92□□□□□ -0.5
VAPB-203ENST00000463370 TUBA3CQ13748 450 aa11.92□□□□□ -0.5
VAPB-203ENST00000463370 SHBQ15464 509 aa11.92□□□□□ -0.5
VAPB-203ENST00000463370 ENTPD8Q5MY95 495 aa11.92□□□□□ -0.5
VAPB-203ENST00000463370 SNAP47Q5SQN1 464 aa11.92□□□□□ -0.5
VAPB-203ENST00000463370 PRSS48Q7RTY5 328 aa11.92□□□□□ -0.5
VAPB-203ENST00000463370 BCDIN3DQ7Z5W3 292 aaKnown RBP11.92□□□□□ -0.5
VAPB-203ENST00000463370 NKAIN4Q8IVV8 208 aa11.92□□□□□ -0.5
VAPB-203ENST00000463370 CDRT4Q8N9R6 151 aa11.92□□□□□ -0.5
VAPB-203ENST00000463370 OR4N2Q8NGD1 307 aa11.92□□□□□ -0.5
VAPB-203ENST00000463370 PDE7BQ9NP56 450 aa11.92□□□□□ -0.5
VAPB-203ENST00000463370 DUSP22Q9NRW4 184 aa11.92□□□□□ -0.5
VAPB-203ENST00000463370 SLC13A4Q9UKG4 626 aa11.92□□□□□ -0.5
VAPB-203ENST00000463370 TMEM131Q92545 1883 aa11.92□□□□□ -0.5
VAPB-203ENST00000463370 IGHV1OR21-1A0A087WYE8 117 aa11.92□□□□□ -0.5
VAPB-203ENST00000463370 CYP7B1O75881 506 aa11.92□□□□□ -0.5
VAPB-203ENST00000463370 NSA2O95478 260 aaKnown RBP11.92□□□□□ -0.5
VAPB-203ENST00000463370 AGR2O95994 175 aa11.92□□□□□ -0.5
VAPB-203ENST00000463370 GKN3PP0CG01 181 aa11.92□□□□□ -0.5
VAPB-203ENST00000463370 RNH1P13489 461 aaKnown RBP11.92□□□□□ -0.5
VAPB-203ENST00000463370 CSF2RBP32927 897 aa11.92□□□□□ -0.5
VAPB-203ENST00000463370 RFX3P48380 749 aa11.92□□□□□ -0.5
VAPB-203ENST00000463370 CDC42P60953 191 aa11.92□□□□□ -0.5
VAPB-203ENST00000463370 ZNF155Q12901 538 aaPredicted RBP11.92□□□□□ -0.5
VAPB-203ENST00000463370 AQP6Q13520 282 aa11.92□□□□□ -0.5
VAPB-203ENST00000463370 PRICKLE2Q7Z3G6 844 aa11.92□□□□□ -0.5
VAPB-203ENST00000463370 KIF18BQ86Y91 864 aa11.92□□□□□ -0.5
VAPB-203ENST00000463370 GALNT12Q8IXK2 581 aa11.92□□□□□ -0.5
VAPB-203ENST00000463370 CACTIN-AS1Q8N1I8 211 aa11.92□□□□□ -0.5
VAPB-203ENST00000463370 DEPDC4Q8N2C3 294 aa11.92□□□□□ -0.5
VAPB-203ENST00000463370 RORBQ92753 470 aa11.92□□□□□ -0.5
VAPB-203ENST00000463370 ALOXE3Q9BYJ1 711 aa11.92□□□□□ -0.5
VAPB-203ENST00000463370 PLA2G12AQ9BZM1 189 aa11.92□□□□□ -0.5
VAPB-203ENST00000463370 FSCN3Q9NQT6 498 aa11.92□□□□□ -0.5
VAPB-203ENST00000463370 FKBP14Q9NWM8 211 aa11.92□□□□□ -0.5
VAPB-203ENST00000463370 TAS2R16Q9NYV7 291 aa11.92□□□□□ -0.5
VAPB-203ENST00000463370 CLCA1A8K7I4 914 aa11.91□□□□□ -0.5
VAPB-203ENST00000463370 H3BMH7 237 aa11.91□□□□□ -0.5
VAPB-203ENST00000463370 SLITRK5O94991 958 aa11.91□□□□□ -0.5
VAPB-203ENST00000463370 STSP08842 583 aa11.91□□□□□ -0.5
VAPB-203ENST00000463370 CCNYL3P0C7X3 344 aa11.91□□□□□ -0.5
VAPB-203ENST00000463370 ZNF182P17025 639 aaPredicted RBP11.91□□□□□ -0.5
VAPB-203ENST00000463370 EMDP50402 254 aa11.91□□□□□ -0.5
VAPB-203ENST00000463370 ZNF136P52737 540 aa11.91□□□□□ -0.5
VAPB-203ENST00000463370 TMBIM6P55061 237 aa11.91□□□□□ -0.5
VAPB-203ENST00000463370 PSG6Q00889 435 aa11.91□□□□□ -0.5
VAPB-203ENST00000463370 MLLT1Q03111 559 aaPredicted RBP11.91□□□□□ -0.5
VAPB-203ENST00000463370 STX4Q12846 297 aa11.91□□□□□ -0.5
VAPB-203ENST00000463370 FAM53BQ14153 422 aa11.91□□□□□ -0.5
VAPB-203ENST00000463370 C1orf94Q6P1W5 598 aa11.91□□□□□ -0.5
VAPB-203ENST00000463370 PTCHD4Q6ZW05 846 aa11.91□□□□□ -0.5
VAPB-203ENST00000463370 ZBTB46Q86UZ6 589 aa11.91□□□□□ -0.5
VAPB-203ENST00000463370 PEX5LQ8IYB4 626 aa11.91□□□□□ -0.5
VAPB-203ENST00000463370 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.91□□□□□ -0.5
VAPB-203ENST00000463370 IPCEF1Q8WWN9 437 aaPredicted RBP11.91□□□□□ -0.5
VAPB-203ENST00000463370 RIT1Q92963 219 aa11.91□□□□□ -0.5
VAPB-203ENST00000463370 DSN1Q9H410 356 aa11.91□□□□□ -0.5
VAPB-203ENST00000463370 PLCXD1Q9NUJ7 323 aa11.91□□□□□ -0.5
VAPB-203ENST00000463370 CNIH4Q9P003 139 aa11.91□□□□□ -0.5
VAPB-203ENST00000463370 EPHA6Q9UF33 1036 aa11.91□□□□□ -0.5
VAPB-203ENST00000463370 PCDH15Q96QU1 1955 aa11.91□□□□□ -0.5
VAPB-203ENST00000463370 C19orf67A6NJJ6 358 aa11.91□□□□□ -0.5
VAPB-203ENST00000463370 PRKNO60260 465 aaPredicted RBP11.91□□□□□ -0.5
VAPB-203ENST00000463370 KIAA0513O60268 411 aa11.91□□□□□ -0.5
VAPB-203ENST00000463370 CTNSO60931 367 aa11.91□□□□□ -0.5
VAPB-203ENST00000463370 STX11O75558 287 aa11.91□□□□□ -0.5
VAPB-203ENST00000463370 IGKV1D-16P01601 117 aa11.91□□□□□ -0.5
VAPB-203ENST00000463370 RPS4Y1P22090 263 aaKnown RBP11.91□□□□□ -0.5
VAPB-203ENST00000463370 PSMB9P28065 219 aa11.91□□□□□ -0.5
VAPB-203ENST00000463370 RGS19P49795 217 aa11.91□□□□□ -0.5
VAPB-203ENST00000463370 MAP4K2Q12851 820 aa11.91□□□□□ -0.5
VAPB-203ENST00000463370 NDUFA9Q16795 377 aa11.91□□□□□ -0.5
VAPB-203ENST00000463370 MRPL2Q5T653 305 aaKnown RBP11.91□□□□□ -0.5
VAPB-203ENST00000463370 ZNF619Q8N2I2 560 aa11.91□□□□□ -0.5
VAPB-203ENST00000463370 B3GNT7Q8NFL0 401 aa11.91□□□□□ -0.5
VAPB-203ENST00000463370 OR51Q1Q8NH59 317 aa11.91□□□□□ -0.5
VAPB-203ENST00000463370 ZDHHC12Q96GR4 267 aa11.91□□□□□ -0.5
VAPB-203ENST00000463370 AHCYL2Q96HN2 611 aaKnown RBP11.91□□□□□ -0.5
VAPB-203ENST00000463370 STACQ99469 402 aa11.91□□□□□ -0.5
VAPB-203ENST00000463370 MCHR1Q99705 422 aa11.91□□□□□ -0.5
VAPB-203ENST00000463370 SAP130Q9H0E3 1048 aa11.91□□□□□ -0.5
VAPB-203ENST00000463370 EGLN3Q9H6Z9 239 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms