RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 CDC25BP30305 580 aa6.87□□□□□ -1.31
SMC3-202ENST00000462899 PPICP45877 212 aa6.87□□□□□ -1.31
SMC3-202ENST00000462899 SLC6A8P48029 635 aa6.87□□□□□ -1.31
SMC3-202ENST00000462899 IRX1P78414 480 aaPredicted RBP6.87□□□□□ -1.31
SMC3-202ENST00000462899 DUSP2Q05923 314 aa6.87□□□□□ -1.31
SMC3-202ENST00000462899 CUL3Q13618 768 aa6.87□□□□□ -1.31
SMC3-202ENST00000462899 EXOSC7Q15024 291 aaKnown RBP6.87□□□□□ -1.31
SMC3-202ENST00000462899 NRF1Q16656 503 aa6.87□□□□□ -1.31
SMC3-202ENST00000462899 EXOC3L2Q2M3D2 409 aa6.87□□□□□ -1.31
SMC3-202ENST00000462899 CT45A2Q5DJT8 189 aa6.87□□□□□ -1.31
SMC3-202ENST00000462899 OR5M10Q6IEU7 315 aa6.87□□□□□ -1.31
SMC3-202ENST00000462899 FAM111BQ6SJ93 734 aa6.87□□□□□ -1.31
SMC3-202ENST00000462899 GPSM1Q86YR5 675 aa6.87□□□□□ -1.31
SMC3-202ENST00000462899 CTAGE4Q8IX94 777 aa6.87□□□□□ -1.31
SMC3-202ENST00000462899 UBQLNLQ8IYU4 475 aa6.87□□□□□ -1.31
SMC3-202ENST00000462899 GABRG1Q8N1C3 465 aa6.87□□□□□ -1.31
SMC3-202ENST00000462899 OR2M3Q8NG83 312 aa6.87□□□□□ -1.31
SMC3-202ENST00000462899 WDR20Q8TBZ3 569 aa6.87□□□□□ -1.31
SMC3-202ENST00000462899 TMBIM1Q969X1 311 aa6.87□□□□□ -1.31
SMC3-202ENST00000462899 GMPPAQ96IJ6 420 aaPredicted RBP6.87□□□□□ -1.31
SMC3-202ENST00000462899 UBXN10Q96LJ8 280 aa6.87□□□□□ -1.31
SMC3-202ENST00000462899 COL21A1Q96P44 957 aa6.87□□□□□ -1.31
SMC3-202ENST00000462899 MTERF1Q99551 399 aaKnown RBP6.87□□□□□ -1.31
SMC3-202ENST00000462899 CD244Q9BZW8 370 aa6.87□□□□□ -1.31
SMC3-202ENST00000462899 TSPY26PQ9H489 355 aa6.87□□□□□ -1.31
SMC3-202ENST00000462899 DKKL1Q9UK85 242 aa6.87□□□□□ -1.31
SMC3-202ENST00000462899 CFL2Q9Y281 166 aa6.87□□□□□ -1.31
SMC3-202ENST00000462899 B3GALT5Q9Y2C3 310 aa6.87□□□□□ -1.31
SMC3-202ENST00000462899 GPR55Q9Y2T6 319 aaPredicted RBP6.87□□□□□ -1.31
SMC3-202ENST00000462899 PLLPQ9Y342 182 aa6.87□□□□□ -1.31
SMC3-202ENST00000462899 TEX264Q9Y6I9 313 aa6.87□□□□□ -1.31
SMC3-202ENST00000462899 A0A1W2PP18 115 aa6.86□□□□□ -1.31
SMC3-202ENST00000462899 FAM234BA2RU67 622 aa6.86□□□□□ -1.31
SMC3-202ENST00000462899 OR2M5A3KFT3 312 aa6.86□□□□□ -1.31
SMC3-202ENST00000462899 DPRXA6NFQ7 191 aa6.86□□□□□ -1.31
SMC3-202ENST00000462899 SHISA9B4DS77 424 aa6.86□□□□□ -1.31
SMC3-202ENST00000462899 H0YIV9 168 aa6.86□□□□□ -1.31
SMC3-202ENST00000462899 LINC01387J3KSC0 135 aa6.86□□□□□ -1.31
SMC3-202ENST00000462899 SSX4O60224 188 aa6.86□□□□□ -1.31
SMC3-202ENST00000462899 CCNT2O60583 730 aaKnown RBP6.86□□□□□ -1.31
SMC3-202ENST00000462899 LMX1BO60663 402 aa6.86□□□□□ -1.31
SMC3-202ENST00000462899 ALDOAP04075 364 aaKnown RBP6.86□□□□□ -1.31
SMC3-202ENST00000462899 CD3EP07766 207 aa6.86□□□□□ -1.31
SMC3-202ENST00000462899 FCGR2AP12318 317 aa6.86□□□□□ -1.31
SMC3-202ENST00000462899 SLC25A16P16260 332 aa6.86□□□□□ -1.31
SMC3-202ENST00000462899 PORP16435 677 aaPredicted RBP6.86□□□□□ -1.31
SMC3-202ENST00000462899 EGR1P18146 543 aa6.86□□□□□ -1.31
SMC3-202ENST00000462899 TCEA1P23193 301 aaKnown RBP6.86□□□□□ -1.31
SMC3-202ENST00000462899 IVDP26440 423 aa6.86□□□□□ -1.31
SMC3-202ENST00000462899 PIK3R1P27986 724 aa6.86□□□□□ -1.31
SMC3-202ENST00000462899 XKP51811 444 aa6.86□□□□□ -1.31
SMC3-202ENST00000462899 ZNF75DP51815 510 aa6.86□□□□□ -1.31
SMC3-202ENST00000462899 RAP1GDS1P52306 607 aa6.86□□□□□ -1.31
SMC3-202ENST00000462899 EEFSECP57772 596 aaKnown RBP6.86□□□□□ -1.31
SMC3-202ENST00000462899 GPX6P59796 221 aa6.86□□□□□ -1.31
SMC3-202ENST00000462899 BSPH1Q075Z2 132 aa6.86□□□□□ -1.31
SMC3-202ENST00000462899 FAPQ12884 760 aa6.86□□□□□ -1.31
SMC3-202ENST00000462899 GANABQ14697 944 aaKnown RBP6.86□□□□□ -1.31
SMC3-202ENST00000462899 TAB1Q15750 504 aa6.86□□□□□ -1.31
SMC3-202ENST00000462899 ZKSCAN8Q15776 578 aaPredicted RBP6.86□□□□□ -1.31
SMC3-202ENST00000462899 CTU2Q2VPK5 515 aaKnown RBP6.86□□□□□ -1.31
SMC3-202ENST00000462899 FAM120AOSQ5T036 256 aa6.86□□□□□ -1.31
SMC3-202ENST00000462899 CCDC137Q6PK04 289 aaKnown RBP6.86□□□□□ -1.31
SMC3-202ENST00000462899 NPSR1Q6W5P4 371 aa6.86□□□□□ -1.31
SMC3-202ENST00000462899 BEND4Q6ZU67 534 aa6.86□□□□□ -1.31
SMC3-202ENST00000462899 IL17RELQ6ZVW7 336 aa6.86□□□□□ -1.31
SMC3-202ENST00000462899 NUDT13Q86X67 352 aa6.86□□□□□ -1.31
SMC3-202ENST00000462899 SPATA6LQ8N4H0 392 aa6.86□□□□□ -1.31
SMC3-202ENST00000462899 OR4K14Q8NGD5 310 aa6.86□□□□□ -1.31
SMC3-202ENST00000462899 S100PBPQ96BU1 408 aa6.86□□□□□ -1.31
SMC3-202ENST00000462899 TMCO6Q96DC7 493 aa6.86□□□□□ -1.31
SMC3-202ENST00000462899 DTNBP1Q96EV8 351 aa6.86□□□□□ -1.31
SMC3-202ENST00000462899 HS6ST2Q96MM7 605 aa6.86□□□□□ -1.31
SMC3-202ENST00000462899 RHNO1Q9BSD3 238 aa6.86□□□□□ -1.31
SMC3-202ENST00000462899 RTN4RQ9BZR6 473 aa6.86□□□□□ -1.31
SMC3-202ENST00000462899 RHOJQ9H4E5 214 aa6.86□□□□□ -1.31
SMC3-202ENST00000462899 WDR41Q9HAD4 459 aa6.86□□□□□ -1.31
SMC3-202ENST00000462899 SAYSD1Q9NPB0 183 aa6.86□□□□□ -1.31
SMC3-202ENST00000462899 MOCS1Q9NZB8 636 aa6.86□□□□□ -1.31
SMC3-202ENST00000462899 GUCA1BQ9UMX6 200 aa6.86□□□□□ -1.31
SMC3-202ENST00000462899 EMC9Q9Y3B6 208 aa6.86□□□□□ -1.31
SMC3-202ENST00000462899 VWC2LB2RUY7 222 aa6.85□□□□□ -1.31
SMC3-202ENST00000462899 K7EPI3 171 aa6.85□□□□□ -1.31
SMC3-202ENST00000462899 DNALI1O14645 258 aaPredicted RBP6.85□□□□□ -1.31
SMC3-202ENST00000462899 TP73O15350 636 aa6.85□□□□□ -1.31
SMC3-202ENST00000462899 CLOCKO15516 846 aa6.85□□□□□ -1.31
SMC3-202ENST00000462899 SEC14L5O43304 696 aa6.85□□□□□ -1.31
SMC3-202ENST00000462899 SEMA3DO95025 777 aa6.85□□□□□ -1.31
SMC3-202ENST00000462899 GBAP04062 536 aa6.85□□□□□ -1.31
SMC3-202ENST00000462899 CCDC166P0CW27 439 aa6.85□□□□□ -1.31
SMC3-202ENST00000462899 MTHFD2P13995 350 aa6.85□□□□□ -1.31
SMC3-202ENST00000462899 NT5EP21589 574 aa6.85□□□□□ -1.31
SMC3-202ENST00000462899 PTX3P26022 381 aaPredicted RBP6.85□□□□□ -1.31
SMC3-202ENST00000462899 AGTR1P30556 359 aa6.85□□□□□ -1.31
SMC3-202ENST00000462899 CXCR5P32302 372 aa6.85□□□□□ -1.31
SMC3-202ENST00000462899 DEKP35659 375 aaKnown RBP6.85□□□□□ -1.31
SMC3-202ENST00000462899 ELK3P41970 407 aa6.85□□□□□ -1.31
SMC3-202ENST00000462899 PNLIPRP2P54317 469 aa6.85□□□□□ -1.31
SMC3-202ENST00000462899 DSCR9P59020 149 aa6.85□□□□□ -1.31
SMC3-202ENST00000462899 DDX39BQ13838 428 aaKnown RBP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms