RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 C15orf38-AP3S2A0A0A6YYH1 394 aa7.22□□□□□ -1.25
CDC42BPA-210ENST00000462553 TMEM120BA0PK00 339 aa7.22□□□□□ -1.25
CDC42BPA-210ENST00000462553 MYO1GB0I1T2 1018 aa7.22□□□□□ -1.25
CDC42BPA-210ENST00000462553 TMEM114B3SHH9 223 aa7.22□□□□□ -1.25
CDC42BPA-210ENST00000462553 TBX19O60806 448 aa7.22□□□□□ -1.25
CDC42BPA-210ENST00000462553 SEC22BO75396 215 aa7.22□□□□□ -1.25
CDC42BPA-210ENST00000462553 NME6O75414 186 aaPredicted RBP7.22□□□□□ -1.25
CDC42BPA-210ENST00000462553 PSMG1O95456 288 aa7.22□□□□□ -1.25
CDC42BPA-210ENST00000462553 EPPINO95925 133 aa7.22□□□□□ -1.25
CDC42BPA-210ENST00000462553 RAF1P04049 648 aa7.22□□□□□ -1.25
CDC42BPA-210ENST00000462553 HPNP05981 417 aa7.22□□□□□ -1.25
CDC42BPA-210ENST00000462553 MYZAPP0CAP1 466 aa7.22□□□□□ -1.25
CDC42BPA-210ENST00000462553 BCKDHAP12694 445 aa7.22□□□□□ -1.25
CDC42BPA-210ENST00000462553 H2AFXP16104 143 aaPredicted RBP7.22□□□□□ -1.25
CDC42BPA-210ENST00000462553 GDF1P27539 372 aa7.22□□□□□ -1.25
CDC42BPA-210ENST00000462553 HOXC12P31275 282 aa7.22□□□□□ -1.25
CDC42BPA-210ENST00000462553 TIMP3P35625 211 aa7.22□□□□□ -1.25
CDC42BPA-210ENST00000462553 PEX19P40855 299 aa7.22□□□□□ -1.25
CDC42BPA-210ENST00000462553 ABCE1P61221 599 aaKnown RBP7.22□□□□□ -1.25
CDC42BPA-210ENST00000462553 MAGOHP61326 146 aaKnown RBP7.22□□□□□ -1.25
CDC42BPA-210ENST00000462553 PDE7AQ13946 482 aa7.22□□□□□ -1.25
CDC42BPA-210ENST00000462553 HEPACAMQ14CZ8 416 aa7.22□□□□□ -1.25
CDC42BPA-210ENST00000462553 DEFB113Q30KQ7 82 aa7.22□□□□□ -1.25
CDC42BPA-210ENST00000462553 GALNTL6Q49A17 601 aa7.22□□□□□ -1.25
CDC42BPA-210ENST00000462553 TRMT12Q53H54 448 aaKnown RBP7.22□□□□□ -1.25
CDC42BPA-210ENST00000462553 LCE2AQ5TA79 106 aaPredicted RBP7.22□□□□□ -1.25
CDC42BPA-210ENST00000462553 NSUN5P2Q63ZY6 315 aa7.22□□□□□ -1.25
CDC42BPA-210ENST00000462553 ANKRD26P1Q6NSI1 321 aa7.22□□□□□ -1.25
CDC42BPA-210ENST00000462553 NPSR1Q6W5P4 371 aa7.22□□□□□ -1.25
CDC42BPA-210ENST00000462553 TMEM64Q6YI46 380 aa7.22□□□□□ -1.25
CDC42BPA-210ENST00000462553 IKBIPQ70UQ0 350 aa7.22□□□□□ -1.25
CDC42BPA-210ENST00000462553 CAMKMTQ7Z624 323 aa7.22□□□□□ -1.25
CDC42BPA-210ENST00000462553 LACC1Q8IV20 430 aa7.22□□□□□ -1.25
CDC42BPA-210ENST00000462553 DDIASQ8IXT1 998 aa7.22□□□□□ -1.25
CDC42BPA-210ENST00000462553 DND1Q8IYX4 353 aaKnown RBP7.22□□□□□ -1.25
CDC42BPA-210ENST00000462553 ANKRD42Q8N9B4 389 aa7.22□□□□□ -1.25
CDC42BPA-210ENST00000462553 C17orf47Q8NEP4 570 aa7.22□□□□□ -1.25
CDC42BPA-210ENST00000462553 OR7G2Q8NG99 324 aa7.22□□□□□ -1.25
CDC42BPA-210ENST00000462553 OR52R1Q8NGF1 315 aa7.22□□□□□ -1.25
CDC42BPA-210ENST00000462553 CLHC1Q8NHS4 586 aa7.22□□□□□ -1.25
CDC42BPA-210ENST00000462553 KAT2AQ92830 837 aa7.22□□□□□ -1.25
CDC42BPA-210ENST00000462553 TP53INP1Q96A56 240 aa7.22□□□□□ -1.25
CDC42BPA-210ENST00000462553 ZNF597Q96LX8 424 aa7.22□□□□□ -1.25
CDC42BPA-210ENST00000462553 VSTM2LQ96N03 204 aa7.22□□□□□ -1.25
CDC42BPA-210ENST00000462553 TSSK3Q96PN8 268 aa7.22□□□□□ -1.25
CDC42BPA-210ENST00000462553 TIMP4Q99727 224 aa7.22□□□□□ -1.25
CDC42BPA-210ENST00000462553 CCT7Q99832 543 aa7.22□□□□□ -1.25
CDC42BPA-210ENST00000462553 DOHHQ9BU89 302 aa7.22□□□□□ -1.25
CDC42BPA-210ENST00000462553 BRINP2Q9C0B6 783 aa7.22□□□□□ -1.25
CDC42BPA-210ENST00000462553 NXF5Q9H1B4 397 aaKnown RBP7.22□□□□□ -1.25
CDC42BPA-210ENST00000462553 GLIPR2Q9H4G4 154 aa7.22□□□□□ -1.25
CDC42BPA-210ENST00000462553 EML4Q9HC35 981 aaKnown RBP7.22□□□□□ -1.25
CDC42BPA-210ENST00000462553 KCNK9Q9NPC2 374 aa7.22□□□□□ -1.25
CDC42BPA-210ENST00000462553 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.22□□□□□ -1.25
CDC42BPA-210ENST00000462553 TAS2R7Q9NYW3 318 aa7.22□□□□□ -1.25
CDC42BPA-210ENST00000462553 CNIH4Q9P003 139 aa7.22□□□□□ -1.25
CDC42BPA-210ENST00000462553 JKAMPQ9P055 326 aa7.22□□□□□ -1.25
CDC42BPA-210ENST00000462553 PSME2Q9UL46 239 aa7.22□□□□□ -1.25
CDC42BPA-210ENST00000462553 ZNF780BQ9Y6R6 833 aa7.22□□□□□ -1.25
CDC42BPA-210ENST00000462553 USF3Q68DE3 2245 aa7.21□□□□□ -1.25
CDC42BPA-210ENST00000462553 C2orf92A0A1B0GVN3 265 aa7.21□□□□□ -1.26
CDC42BPA-210ENST00000462553 ANKRD33BA6NCL7 494 aa7.21□□□□□ -1.26
CDC42BPA-210ENST00000462553 MBD3L4A6NDZ8 208 aaPredicted RBP7.21□□□□□ -1.26
CDC42BPA-210ENST00000462553 MBD3L3A6NE82 208 aaPredicted RBP7.21□□□□□ -1.26
CDC42BPA-210ENST00000462553 MBD3L5A6NJ08 208 aaPredicted RBP7.21□□□□□ -1.26
CDC42BPA-210ENST00000462553 AHRRA9YTQ3 701 aa7.21□□□□□ -1.26
CDC42BPA-210ENST00000462553 PLOD3O60568 738 aa7.21□□□□□ -1.26
CDC42BPA-210ENST00000462553 SNNO75324 88 aaPredicted RBP7.21□□□□□ -1.26
CDC42BPA-210ENST00000462553 HSPA4LO95757 839 aa7.21□□□□□ -1.26
CDC42BPA-210ENST00000462553 CHEK2O96017 543 aa7.21□□□□□ -1.26
CDC42BPA-210ENST00000462553 EPXP11678 715 aa7.21□□□□□ -1.26
CDC42BPA-210ENST00000462553 CD53P19397 219 aa7.21□□□□□ -1.26
CDC42BPA-210ENST00000462553 ABCD3P28288 659 aa7.21□□□□□ -1.26
CDC42BPA-210ENST00000462553 FRKP42685 505 aaPredicted RBP7.21□□□□□ -1.26
CDC42BPA-210ENST00000462553 SLC1A6P48664 564 aa7.21□□□□□ -1.26
CDC42BPA-210ENST00000462553 CDK9P50750 372 aaKnown RBP7.21□□□□□ -1.26
CDC42BPA-210ENST00000462553 DGKQP52824 942 aa7.21□□□□□ -1.26
CDC42BPA-210ENST00000462553 FBXW4P57775 412 aa7.21□□□□□ -1.26
CDC42BPA-210ENST00000462553 SORDQ00796 357 aa7.21□□□□□ -1.26
CDC42BPA-210ENST00000462553 LTBQ06643 244 aa7.21□□□□□ -1.26
CDC42BPA-210ENST00000462553 BST1Q10588 318 aa7.21□□□□□ -1.26
CDC42BPA-210ENST00000462553 RPS6KA2Q15349 733 aa7.21□□□□□ -1.26
CDC42BPA-210ENST00000462553 PDCD2Q16342 344 aaPredicted RBP7.21□□□□□ -1.26
CDC42BPA-210ENST00000462553 NNATQ16517 81 aa7.21□□□□□ -1.26
CDC42BPA-210ENST00000462553 TTMPQ5BVD1 217 aa7.21□□□□□ -1.26
CDC42BPA-210ENST00000462553 NHSL2Q5HYW2 709 aa7.21□□□□□ -1.26
CDC42BPA-210ENST00000462553 C6orf136Q5SQH8 315 aa7.21□□□□□ -1.26
CDC42BPA-210ENST00000462553 C6orf163Q5TEZ5 329 aa7.21□□□□□ -1.26
CDC42BPA-210ENST00000462553 AGBL2Q5U5Z8 902 aa7.21□□□□□ -1.26
CDC42BPA-210ENST00000462553 VASNQ6EMK4 673 aa7.21□□□□□ -1.26
CDC42BPA-210ENST00000462553 DESI1Q6ICB0 168 aa7.21□□□□□ -1.26
CDC42BPA-210ENST00000462553 LIAT1Q6ZQX7 453 aa7.21□□□□□ -1.26
CDC42BPA-210ENST00000462553 BIVMQ86UB2 503 aa7.21□□□□□ -1.26
CDC42BPA-210ENST00000462553 PRR22Q8IZ63 422 aa7.21□□□□□ -1.26
CDC42BPA-210ENST00000462553 FAM9CQ8IZT9 166 aa7.21□□□□□ -1.26
CDC42BPA-210ENST00000462553 LIX1Q8N485 282 aa7.21□□□□□ -1.26
CDC42BPA-210ENST00000462553 GOT1L1Q8NHS2 421 aaPredicted RBP7.21□□□□□ -1.26
CDC42BPA-210ENST00000462553 MBD3L2Q8NHZ7 208 aaPredicted RBP7.21□□□□□ -1.26
CDC42BPA-210ENST00000462553 NUDT8Q8WV74 236 aa7.21□□□□□ -1.26
CDC42BPA-210ENST00000462553 GFM2Q969S9 779 aaKnown RBP7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms