RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 APIPQ96GX9 242 aa13.92□□□□□ -0.18
SKA3-204ENST00000462482 ZNF845Q96IR2 970 aaPredicted RBP13.92□□□□□ -0.18
SKA3-204ENST00000462482 TMEM237Q96Q45 408 aa13.92□□□□□ -0.18
SKA3-204ENST00000462482 EBPLQ9BY08 206 aa13.92□□□□□ -0.18
SKA3-204ENST00000462482 C3orf14Q9HBI5 128 aa13.92□□□□□ -0.18
SKA3-204ENST00000462482 Q9N2J8 555 aa13.92□□□□□ -0.18
SKA3-204ENST00000462482 DDX18Q9NVP1 670 aaKnown RBP13.92□□□□□ -0.18
SKA3-204ENST00000462482 ABCG2Q9UNQ0 655 aa13.92□□□□□ -0.18
SKA3-204ENST00000462482 TESMINQ9Y4I5 508 aa13.92□□□□□ -0.18
SKA3-204ENST00000462482 ABCA4P78363 2273 aa13.92□□□□□ -0.18
SKA3-204ENST00000462482 A0A087WV62 115 aa13.91□□□□□ -0.18
SKA3-204ENST00000462482 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.91□□□□□ -0.18
SKA3-204ENST00000462482 CTIFO43310 598 aaKnown RBP13.91□□□□□ -0.18
SKA3-204ENST00000462482 DLX3O60479 287 aa13.91□□□□□ -0.18
SKA3-204ENST00000462482 NME6O75414 186 aaPredicted RBP13.91□□□□□ -0.18
SKA3-204ENST00000462482 CRCPO75575 148 aa13.91□□□□□ -0.18
SKA3-204ENST00000462482 TNFSF13O75888 250 aa13.91□□□□□ -0.18
SKA3-204ENST00000462482 POU2F1P14859 743 aa13.91□□□□□ -0.18
SKA3-204ENST00000462482 DDCP20711 480 aa13.91□□□□□ -0.18
SKA3-204ENST00000462482 SIRPAP78324 504 aa13.91□□□□□ -0.18
SKA3-204ENST00000462482 RAE1P78406 368 aaKnown RBP13.91□□□□□ -0.18
SKA3-204ENST00000462482 FAM27E3Q08E93 113 aa13.91□□□□□ -0.18
SKA3-204ENST00000462482 ZNF763Q0D2J5 394 aa13.91□□□□□ -0.18
SKA3-204ENST00000462482 STX5Q13190 355 aa13.91□□□□□ -0.18
SKA3-204ENST00000462482 GLE1Q53GS7 698 aaKnown RBP13.91□□□□□ -0.18
SKA3-204ENST00000462482 GALNT18Q6P9A2 607 aa13.91□□□□□ -0.18
SKA3-204ENST00000462482 CLEC9AQ6UXN8 241 aa13.91□□□□□ -0.18
SKA3-204ENST00000462482 TIFABQ6ZNK6 161 aa13.91□□□□□ -0.18
SKA3-204ENST00000462482 TMEM151AQ8N4L1 468 aa13.91□□□□□ -0.18
SKA3-204ENST00000462482 STARD4Q96DR4 205 aa13.91□□□□□ -0.18
SKA3-204ENST00000462482 PIGQQ9BRB3 760 aa13.91□□□□□ -0.18
SKA3-204ENST00000462482 HHATLQ9HCP6 504 aa13.91□□□□□ -0.18
SKA3-204ENST00000462482 KLHL28Q9NXS3 571 aa13.91□□□□□ -0.18
SKA3-204ENST00000462482 ELOVL5Q9NYP7 299 aa13.91□□□□□ -0.18
SKA3-204ENST00000462482 TMEM216Q9P0N5 145 aa13.91□□□□□ -0.18
SKA3-204ENST00000462482 DMGDHQ9UI17 866 aaKnown RBP13.91□□□□□ -0.18
SKA3-204ENST00000462482 GRID1Q9ULK0 1009 aa13.91□□□□□ -0.18
SKA3-204ENST00000462482 ZNF175Q9Y473 711 aa13.91□□□□□ -0.18
SKA3-204ENST00000462482 SEC14L5O43304 696 aa13.9□□□□□ -0.18
SKA3-204ENST00000462482 TNFRSF21O75509 655 aa13.9□□□□□ -0.18
SKA3-204ENST00000462482 JUNP05412 331 aaKnown RBP13.9□□□□□ -0.18
SKA3-204ENST00000462482 CTAGE8P0CG41 777 aa13.9□□□□□ -0.18
SKA3-204ENST00000462482 FCGR2AP12318 317 aa13.9□□□□□ -0.18
SKA3-204ENST00000462482 MC3RP41968 323 aa13.9□□□□□ -0.18
SKA3-204ENST00000462482 RFX3P48380 749 aa13.9□□□□□ -0.18
SKA3-204ENST00000462482 HTR6P50406 440 aa13.9□□□□□ -0.18
SKA3-204ENST00000462482 PRKAA2P54646 552 aa13.9□□□□□ -0.18
SKA3-204ENST00000462482 GAS1P54826 345 aa13.9□□□□□ -0.18
SKA3-204ENST00000462482 NAA20P61599 178 aa13.9□□□□□ -0.18
SKA3-204ENST00000462482 SGCBQ16585 318 aa13.9□□□□□ -0.18
SKA3-204ENST00000462482 CTAGE4Q8IX94 777 aa13.9□□□□□ -0.18
SKA3-204ENST00000462482 LRRC75A-AS1Q8N1F1 130 aa13.9□□□□□ -0.18
SKA3-204ENST00000462482 CCNYL1Q8N7R7 359 aa13.9□□□□□ -0.18
SKA3-204ENST00000462482 FADS6Q8N9I5 356 aa13.9□□□□□ -0.18
SKA3-204ENST00000462482 OR2M3Q8NG83 312 aa13.9□□□□□ -0.18
SKA3-204ENST00000462482 OR4N2Q8NGD1 307 aa13.9□□□□□ -0.18
SKA3-204ENST00000462482 RNF138Q8WVD3 245 aa13.9□□□□□ -0.18
SKA3-204ENST00000462482 ZNF592Q92610 1267 aa13.9□□□□□ -0.18
SKA3-204ENST00000462482 GFM2Q969S9 779 aaKnown RBP13.9□□□□□ -0.18
SKA3-204ENST00000462482 CCDC126Q96EE4 140 aa13.9□□□□□ -0.18
SKA3-204ENST00000462482 PIK3IP1Q96FE7 263 aa13.9□□□□□ -0.18
SKA3-204ENST00000462482 PIP5K1AQ99755 562 aa13.9□□□□□ -0.18
SKA3-204ENST00000462482 PINK1Q9BXM7 581 aa13.9□□□□□ -0.18
SKA3-204ENST00000462482 PRRG4Q9BZD6 226 aa13.9□□□□□ -0.18
SKA3-204ENST00000462482 TBL1XR1Q9BZK7 514 aa13.9□□□□□ -0.18
SKA3-204ENST00000462482 IQCGQ9H095 443 aaKnown RBP13.9□□□□□ -0.18
SKA3-204ENST00000462482 MID1IP1Q9NPA3 183 aa13.9□□□□□ -0.18
SKA3-204ENST00000462482 FANCFQ9NPI8 374 aa13.9□□□□□ -0.18
SKA3-204ENST00000462482 FAM120CQ9NX05 1096 aaKnown RBP13.9□□□□□ -0.18
SKA3-204ENST00000462482 MED11Q9P086 117 aa13.9□□□□□ -0.18
SKA3-204ENST00000462482 C6orf203Q9P0P8 240 aaPredicted RBP13.9□□□□□ -0.18
SKA3-204ENST00000462482 WBP11Q9Y2W2 641 aaKnown RBP13.9□□□□□ -0.18
SKA3-204ENST00000462482 TIMM22Q9Y584 194 aa13.9□□□□□ -0.18
SKA3-204ENST00000462482 EML6Q6ZMW3 1958 aa13.9□□□□□ -0.18
SKA3-204ENST00000462482 MYO1GB0I1T2 1018 aa13.89□□□□□ -0.19
SKA3-204ENST00000462482 H3BML4 177 aa13.89□□□□□ -0.19
SKA3-204ENST00000462482 C16orf97H3BN30 126 aa13.89□□□□□ -0.19
SKA3-204ENST00000462482 H3BQF6 201 aa13.89□□□□□ -0.19
SKA3-204ENST00000462482 EMC8O43402 210 aa13.89□□□□□ -0.19
SKA3-204ENST00000462482 GSTA1P08263 222 aa13.89□□□□□ -0.19
SKA3-204ENST00000462482 ABHD2P08910 425 aa13.89□□□□□ -0.19
SKA3-204ENST00000462482 B3GALT5-AS1P59052 145 aa13.89□□□□□ -0.19
SKA3-204ENST00000462482 PSG6Q00889 435 aa13.89□□□□□ -0.19
SKA3-204ENST00000462482 Q5PR19 223 aa13.89□□□□□ -0.19
SKA3-204ENST00000462482 PPP4R4Q6NUP7 873 aa13.89□□□□□ -0.19
SKA3-204ENST00000462482 VWA1Q6PCB0 445 aa13.89□□□□□ -0.19
SKA3-204ENST00000462482 TMEM107Q6UX40 140 aa13.89□□□□□ -0.19
SKA3-204ENST00000462482 Q71RC1 249 aaPredicted RBP13.89□□□□□ -0.19
SKA3-204ENST00000462482 BTLAQ7Z6A9 289 aa13.89□□□□□ -0.19
SKA3-204ENST00000462482 ACMSDQ8TDX5 336 aa13.89□□□□□ -0.19
SKA3-204ENST00000462482 L3HYPDHQ96EM0 354 aa13.89□□□□□ -0.19
SKA3-204ENST00000462482 C16orf45Q96MC5 204 aaPredicted RBP13.89□□□□□ -0.19
SKA3-204ENST00000462482 WFIKKN1Q96NZ8 548 aa13.89□□□□□ -0.19
SKA3-204ENST00000462482 OPN3Q9H1Y3 402 aaPredicted RBP13.89□□□□□ -0.19
SKA3-204ENST00000462482 UBTD1Q9HAC8 227 aa13.89□□□□□ -0.19
SKA3-204ENST00000462482 SIRT5Q9NXA8 310 aa13.89□□□□□ -0.19
SKA3-204ENST00000462482 PROCRQ9UNN8 238 aa13.89□□□□□ -0.19
SKA3-204ENST00000462482 C19orf53Q9UNZ5 99 aaPredicted RBP13.89□□□□□ -0.19
SKA3-204ENST00000462482 ZNF337Q9Y3M9 751 aa13.89□□□□□ -0.19
SKA3-204ENST00000462482 NINQ8N4C6 2090 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms