RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 ABCG2Q9UNQ0 655 aa9.26□□□□□ -0.93
SF3A3-204ENST00000462258 ANKRD17O75179 2603 aaKnown RBP9.26□□□□□ -0.93
SF3A3-204ENST00000462258 HSPB2A8KAH6 182 aa9.25□□□□□ -0.93
SF3A3-204ENST00000462258 C17orf51A8MQB3 221 aa9.25□□□□□ -0.93
SF3A3-204ENST00000462258 AHRRA9YTQ3 701 aa9.25□□□□□ -0.93
SF3A3-204ENST00000462258 ESPNB1AK53 854 aa9.25□□□□□ -0.93
SF3A3-204ENST00000462258 SCAMP2O15127 329 aaKnown RBP9.25□□□□□ -0.93
SF3A3-204ENST00000462258 CTIFO43310 598 aaKnown RBP9.25□□□□□ -0.93
SF3A3-204ENST00000462258 HSPA4LO95757 839 aa9.25□□□□□ -0.93
SF3A3-204ENST00000462258 EPPINO95925 133 aa9.25□□□□□ -0.93
SF3A3-204ENST00000462258 PRPS2P11908 318 aa9.25□□□□□ -0.93
SF3A3-204ENST00000462258 DDX5P17844 614 aaKnown RBP9.25□□□□□ -0.93
SF3A3-204ENST00000462258 RPL3P39023 403 aaKnown RBP9.25□□□□□ -0.93
SF3A3-204ENST00000462258 FRKP42685 505 aaPredicted RBP9.25□□□□□ -0.93
SF3A3-204ENST00000462258 GAS1P54826 345 aa9.25□□□□□ -0.93
SF3A3-204ENST00000462258 PSMD4P55036 377 aaKnown RBP9.25□□□□□ -0.93
SF3A3-204ENST00000462258 STX5Q13190 355 aa9.25□□□□□ -0.93
SF3A3-204ENST00000462258 PTGR1Q14914 329 aa9.25□□□□□ -0.93
SF3A3-204ENST00000462258 SF3B4Q15427 424 aaKnown RBP eCLIP9.25□□□□□ -0.931e-12■■■■■ 43.6
SF3A3-204ENST00000462258 HSPB2Q16082 182 aa9.25□□□□□ -0.93
SF3A3-204ENST00000462258 R3HCC1LQ7Z5L2 792 aaKnown RBP9.25□□□□□ -0.93
SF3A3-204ENST00000462258 LURAP1LQ8IV03 231 aa9.25□□□□□ -0.93
SF3A3-204ENST00000462258 LIX1LQ8IVB5 337 aa9.25□□□□□ -0.93
SF3A3-204ENST00000462258 RELL2Q8NC24 303 aaPredicted RBP9.25□□□□□ -0.93
SF3A3-204ENST00000462258 NAXEQ8NCW5 288 aa9.25□□□□□ -0.93
SF3A3-204ENST00000462258 TNIP2Q8NFZ5 429 aa9.25□□□□□ -0.93
SF3A3-204ENST00000462258 OR4K17Q8NGC6 315 aa9.25□□□□□ -0.93
SF3A3-204ENST00000462258 OR6Y1Q8NGX8 325 aa9.25□□□□□ -0.93
SF3A3-204ENST00000462258 FBXO30Q8TB52 745 aa9.25□□□□□ -0.93
SF3A3-204ENST00000462258 MTERF3Q96E29 417 aa9.25□□□□□ -0.93
SF3A3-204ENST00000462258 WDYHV1Q96HA8 205 aa9.25□□□□□ -0.93
SF3A3-204ENST00000462258 SFXN2Q96NB2 322 aa9.25□□□□□ -0.93
SF3A3-204ENST00000462258 TRIB1Q96RU8 372 aa9.25□□□□□ -0.93
SF3A3-204ENST00000462258 C1orf50Q9BV19 199 aa9.25□□□□□ -0.93
SF3A3-204ENST00000462258 CENPHQ9H3R5 247 aa9.25□□□□□ -0.93
SF3A3-204ENST00000462258 C3orf14Q9HBI5 128 aa9.25□□□□□ -0.93
SF3A3-204ENST00000462258 SSU72Q9NP77 194 aaKnown RBP9.25□□□□□ -0.93
SF3A3-204ENST00000462258 ACSS1Q9NUB1 689 aaPredicted RBP9.25□□□□□ -0.93
SF3A3-204ENST00000462258 TAS2R10Q9NYW0 307 aa9.25□□□□□ -0.93
SF3A3-204ENST00000462258 FLRT3Q9NZU0 649 aa9.25□□□□□ -0.93
SF3A3-204ENST00000462258 PPP4R1LQ9P1A2 415 aa9.25□□□□□ -0.93
SF3A3-204ENST00000462258 ZDHHC2Q9UIJ5 367 aa9.25□□□□□ -0.93
SF3A3-204ENST00000462258 MRTO4Q9UKD2 239 aaKnown RBP9.25□□□□□ -0.93
SF3A3-204ENST00000462258 TACC2O95359 2948 aa9.25□□□□□ -0.93
SF3A3-204ENST00000462258 PDZD2O15018 2839 aa9.25□□□□□ -0.93
SF3A3-204ENST00000462258 ANKHD1Q8IWZ3 2542 aaKnown RBP9.25□□□□□ -0.93
SF3A3-204ENST00000462258 POLQO75417 2590 aa9.24□□□□□ -0.93
SF3A3-204ENST00000462258 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.24□□□□□ -0.93
SF3A3-204ENST00000462258 MBD3L4A6NDZ8 208 aaPredicted RBP9.24□□□□□ -0.93
SF3A3-204ENST00000462258 MBD3L3A6NE82 208 aaPredicted RBP9.24□□□□□ -0.93
SF3A3-204ENST00000462258 MBD3L5A6NJ08 208 aaPredicted RBP9.24□□□□□ -0.93
SF3A3-204ENST00000462258 CD8B2A6NJW9 211 aa9.24□□□□□ -0.93
SF3A3-204ENST00000462258 TTC36A6NLP5 189 aa9.24□□□□□ -0.93
SF3A3-204ENST00000462258 ENO4A6NNW6 628 aa9.24□□□□□ -0.93
SF3A3-204ENST00000462258 B4DXG7 233 aa9.24□□□□□ -0.93
SF3A3-204ENST00000462258 H0Y3Z8 333 aa9.24□□□□□ -0.93
SF3A3-204ENST00000462258 DVL2O14641 736 aa9.24□□□□□ -0.93
SF3A3-204ENST00000462258 PEX11AO75192 247 aa9.24□□□□□ -0.93
SF3A3-204ENST00000462258 LYPLA1O75608 230 aaPredicted RBP9.24□□□□□ -0.93
SF3A3-204ENST00000462258 KCNH1O95259 989 aa9.24□□□□□ -0.93
SF3A3-204ENST00000462258 IL33O95760 270 aa9.24□□□□□ -0.93
SF3A3-204ENST00000462258 SERPINE1P05121 402 aa9.24□□□□□ -0.93
SF3A3-204ENST00000462258 EFNA1P20827 205 aaPredicted RBP9.24□□□□□ -0.93
SF3A3-204ENST00000462258 BMP5P22003 454 aa9.24□□□□□ -0.93
SF3A3-204ENST00000462258 TCEA1P23193 301 aaKnown RBP9.24□□□□□ -0.93
SF3A3-204ENST00000462258 MANFP55145 182 aaKnown RBP9.24□□□□□ -0.93
SF3A3-204ENST00000462258 GFRA1P56159 465 aa9.24□□□□□ -0.93
SF3A3-204ENST00000462258 TLE4Q04727 773 aa9.24□□□□□ -0.93
SF3A3-204ENST00000462258 GAB1Q13480 694 aa9.24□□□□□ -0.93
SF3A3-204ENST00000462258 RCAN2Q14206 197 aa9.24□□□□□ -0.93
SF3A3-204ENST00000462258 CHI3L2Q15782 390 aa9.24□□□□□ -0.93
SF3A3-204ENST00000462258 PDCD2Q16342 344 aaPredicted RBP9.24□□□□□ -0.93
SF3A3-204ENST00000462258 VPS26BQ4G0F5 336 aa9.24□□□□□ -0.93
SF3A3-204ENST00000462258 CEP85LQ5SZL2 805 aa9.24□□□□□ -0.93
SF3A3-204ENST00000462258 NSUN5P2Q63ZY6 315 aa9.24□□□□□ -0.93
SF3A3-204ENST00000462258 OR5M10Q6IEU7 315 aa9.24□□□□□ -0.93
SF3A3-204ENST00000462258 AAGABQ6PD74 315 aa9.24□□□□□ -0.93
SF3A3-204ENST00000462258 ENPP6Q6UWR7 440 aa9.24□□□□□ -0.93
SF3A3-204ENST00000462258 LRIG3Q6UXM1 1119 aa9.24□□□□□ -0.93
SF3A3-204ENST00000462258 NUDCD3Q8IVD9 361 aa9.24□□□□□ -0.93
SF3A3-204ENST00000462258 DMRTC2Q8IXT2 367 aaPredicted RBP9.24□□□□□ -0.93
SF3A3-204ENST00000462258 CDRT4Q8N9R6 151 aa9.24□□□□□ -0.93
SF3A3-204ENST00000462258 FNDC5Q8NAU1 212 aa9.24□□□□□ -0.93
SF3A3-204ENST00000462258 NUP43Q8NFH3 380 aa9.24□□□□□ -0.93
SF3A3-204ENST00000462258 MBD3L2Q8NHZ7 208 aaPredicted RBP9.24□□□□□ -0.93
SF3A3-204ENST00000462258 PIK3R3Q92569 461 aa9.24□□□□□ -0.93
SF3A3-204ENST00000462258 TUBGCP3Q96CW5 907 aa9.24□□□□□ -0.93
SF3A3-204ENST00000462258 GIMAP5Q96F15 307 aa9.24□□□□□ -0.93
SF3A3-204ENST00000462258 RMND5BQ96G75 393 aaPredicted RBP9.24□□□□□ -0.93
SF3A3-204ENST00000462258 C3orf30Q96M34 536 aa9.24□□□□□ -0.93
SF3A3-204ENST00000462258 ZIM3Q96PE6 472 aa9.24□□□□□ -0.93
SF3A3-204ENST00000462258 FAM120CQ9NX05 1096 aaKnown RBP9.24□□□□□ -0.93
SF3A3-204ENST00000462258 ATP6V1HQ9UI12 483 aa9.24□□□□□ -0.93
SF3A3-204ENST00000462258 OTOGQ6ZRI0 2925 aa9.24□□□□□ -0.93
SF3A3-204ENST00000462258 AKAP9Q99996 3911 aa9.24□□□□□ -0.93
SF3A3-204ENST00000462258 GXYLT2A0PJZ3 443 aa9.23□□□□□ -0.93
SF3A3-204ENST00000462258 WDR91A4D1P6 747 aa9.23□□□□□ -0.93
SF3A3-204ENST00000462258 TM9SF1O15321 606 aa9.23□□□□□ -0.93
SF3A3-204ENST00000462258 FADS1O60427 444 aa9.23□□□□□ -0.93
SF3A3-204ENST00000462258 NKX2-2O95096 273 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms