RNA–Protein interactions for RNA: ENST00000462125.5

C9orf3-210, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 961 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-210ENST00000462125 SSU72Q9NP77 194 aaKnown RBP12.03□□□□□ -0.48
C9orf3-210ENST00000462125 SERHLQ9NQF3 203 aa12.03□□□□□ -0.48
C9orf3-210ENST00000462125 DDX18Q9NVP1 670 aaKnown RBP12.03□□□□□ -0.48
C9orf3-210ENST00000462125 NTMQ9P121 344 aa12.03□□□□□ -0.48
C9orf3-210ENST00000462125 BAIAP2L1Q9UHR4 511 aa12.03□□□□□ -0.48
C9orf3-210ENST00000462125 FIS1Q9Y3D6 152 aa12.03□□□□□ -0.48
C9orf3-210ENST00000462125 WIF1Q9Y5W5 379 aa12.03□□□□□ -0.48
C9orf3-210ENST00000462125 PDZD2O15018 2839 aa12.02□□□□□ -0.48
C9orf3-210ENST00000462125 TTC36A6NLP5 189 aa12.02□□□□□ -0.49
C9orf3-210ENST00000462125 ENO4A6NNW6 628 aa12.02□□□□□ -0.49
C9orf3-210ENST00000462125 TMEM233B4DJY2 109 aa12.02□□□□□ -0.49
C9orf3-210ENST00000462125 B4DXG7 233 aa12.02□□□□□ -0.49
C9orf3-210ENST00000462125 PIP5K1BO14986 540 aa12.02□□□□□ -0.49
C9orf3-210ENST00000462125 FADS1O60427 444 aa12.02□□□□□ -0.49
C9orf3-210ENST00000462125 ZIC3O60481 467 aa12.02□□□□□ -0.49
C9orf3-210ENST00000462125 BCKDHAP12694 445 aa12.02□□□□□ -0.49
C9orf3-210ENST00000462125 CYP4B1P13584 511 aa12.02□□□□□ -0.49
C9orf3-210ENST00000462125 IL12BP29460 328 aa12.02□□□□□ -0.49
C9orf3-210ENST00000462125 SRD5A2P31213 254 aa12.02□□□□□ -0.49
C9orf3-210ENST00000462125 ARRB2P32121 409 aa12.02□□□□□ -0.49
C9orf3-210ENST00000462125 GFRA1P56159 465 aa12.02□□□□□ -0.49
C9orf3-210ENST00000462125 MLC1Q15049 377 aa12.02□□□□□ -0.49
C9orf3-210ENST00000462125 SLC25A35Q3KQZ1 300 aa12.02□□□□□ -0.49
C9orf3-210ENST00000462125 ZNF385BQ569K4 471 aa12.02□□□□□ -0.49
C9orf3-210ENST00000462125 XKR7Q5GH72 579 aa12.02□□□□□ -0.49
C9orf3-210ENST00000462125 POMZP3Q6PJE2 187 aa12.02□□□□□ -0.49
C9orf3-210ENST00000462125 EXOC3L1Q86VI1 746 aa12.02□□□□□ -0.49
C9orf3-210ENST00000462125 LACC1Q8IV20 430 aa12.02□□□□□ -0.49
C9orf3-210ENST00000462125 GFM2Q969S9 779 aaKnown RBP12.02□□□□□ -0.49
C9orf3-210ENST00000462125 EFHD2Q96C19 240 aaPredicted RBP12.02□□□□□ -0.49
C9orf3-210ENST00000462125 PPCDCQ96CD2 204 aa12.02□□□□□ -0.49
C9orf3-210ENST00000462125 LURAP1Q96LR2 239 aa12.02□□□□□ -0.49
C9orf3-210ENST00000462125 PPP3R2Q96LZ3 170 aa12.02□□□□□ -0.49
C9orf3-210ENST00000462125 TSSK3Q96PN8 268 aa12.02□□□□□ -0.49
C9orf3-210ENST00000462125 CCDC134Q9H6E4 229 aa12.02□□□□□ -0.49
C9orf3-210ENST00000462125 CALHM2Q9HA72 323 aa12.02□□□□□ -0.49
C9orf3-210ENST00000462125 ACSS1Q9NUB1 689 aaPredicted RBP12.02□□□□□ -0.49
C9orf3-210ENST00000462125 INTS9Q9NV88 658 aaKnown RBP12.02□□□□□ -0.49
C9orf3-210ENST00000462125 NKIRAS1Q9NYS0 192 aa12.02□□□□□ -0.49
C9orf3-210ENST00000462125 ZNF629Q9UEG4 869 aaPredicted RBP12.02□□□□□ -0.49
C9orf3-210ENST00000462125 ZDHHC2Q9UIJ5 367 aa12.02□□□□□ -0.49
C9orf3-210ENST00000462125 CBLCQ9ULV8 474 aa12.02□□□□□ -0.49
C9orf3-210ENST00000462125 MAPRE3Q9UPY8 281 aa12.02□□□□□ -0.49
C9orf3-210ENST00000462125 OR10H1Q9Y4A9 318 aa12.02□□□□□ -0.49
C9orf3-210ENST00000462125 HCFC1P51610 2035 aa12.01□□□□□ -0.49
C9orf3-210ENST00000462125 KDM4EB2RXH2 506 aaPredicted RBP12.01□□□□□ -0.49
C9orf3-210ENST00000462125 SYT5O00445 386 aa12.01□□□□□ -0.49
C9orf3-210ENST00000462125 IL33O95760 270 aa12.01□□□□□ -0.49
C9orf3-210ENST00000462125 PRPS2P11908 318 aa12.01□□□□□ -0.49
C9orf3-210ENST00000462125 CAPN3P20807 821 aa12.01□□□□□ -0.49
C9orf3-210ENST00000462125 GRK2P25098 689 aa12.01□□□□□ -0.49
C9orf3-210ENST00000462125 ASMTP46597 345 aa12.01□□□□□ -0.49
C9orf3-210ENST00000462125 RPL38P63173 70 aaKnown RBP12.01□□□□□ -0.49
C9orf3-210ENST00000462125 ZNF155Q12901 538 aaPredicted RBP12.01□□□□□ -0.49
C9orf3-210ENST00000462125 DECR1Q16698 335 aa12.01□□□□□ -0.49
C9orf3-210ENST00000462125 SH2D4BQ5SQS7 431 aa12.01□□□□□ -0.49
C9orf3-210ENST00000462125 DCST1Q5T197 706 aa12.01□□□□□ -0.49
C9orf3-210ENST00000462125 ANKRD26P1Q6NSI1 321 aa12.01□□□□□ -0.49
C9orf3-210ENST00000462125 ZCCHC23Q6ZST2 131 aa12.01□□□□□ -0.49
C9orf3-210ENST00000462125 ADGRE4PQ86SQ3 457 aa12.01□□□□□ -0.49
C9orf3-210ENST00000462125 TRIM42Q8IWZ5 723 aa12.01□□□□□ -0.49
C9orf3-210ENST00000462125 DDIASQ8IXT1 998 aa12.01□□□□□ -0.49
C9orf3-210ENST00000462125 NAXEQ8NCW5 288 aa12.01□□□□□ -0.49
C9orf3-210ENST00000462125 TNIP2Q8NFZ5 429 aa12.01□□□□□ -0.49
C9orf3-210ENST00000462125 CEP70Q8NHQ1 597 aa12.01□□□□□ -0.49
C9orf3-210ENST00000462125 CIDECQ96AQ7 238 aaPredicted RBP12.01□□□□□ -0.49
C9orf3-210ENST00000462125 DTNBP1Q96EV8 351 aa12.01□□□□□ -0.49
C9orf3-210ENST00000462125 ZBED6CLQ96FA7 236 aaPredicted RBP12.01□□□□□ -0.49
C9orf3-210ENST00000462125 C3orf30Q96M34 536 aa12.01□□□□□ -0.49
C9orf3-210ENST00000462125 UCN2Q96RP3 112 aa12.01□□□□□ -0.49
C9orf3-210ENST00000462125 NSRP1Q9H0G5 558 aaKnown RBP12.01□□□□□ -0.49
C9orf3-210ENST00000462125 SLC24A3Q9HC58 644 aa12.01□□□□□ -0.49
C9orf3-210ENST00000462125 MCCC2Q9HCC0 563 aa12.01□□□□□ -0.49
C9orf3-210ENST00000462125 Q9N2J8 555 aa12.01□□□□□ -0.49
C9orf3-210ENST00000462125 SH3BP4Q9P0V3 963 aa12.01□□□□□ -0.49
C9orf3-210ENST00000462125 ATP6V1HQ9UI12 483 aa12.01□□□□□ -0.49
C9orf3-210ENST00000462125 FBXL2Q9UKC9 423 aa12.01□□□□□ -0.49
C9orf3-210ENST00000462125 MRTO4Q9UKD2 239 aaKnown RBP12.01□□□□□ -0.49
C9orf3-210ENST00000462125 GIMAP1-GIMAP5A0A087WTJ2 511 aa12□□□□□ -0.49
C9orf3-210ENST00000462125 GMNCA6NCL1 334 aa12□□□□□ -0.49
C9orf3-210ENST00000462125 MBD3L4A6NDZ8 208 aaPredicted RBP12□□□□□ -0.49
C9orf3-210ENST00000462125 MBD3L3A6NE82 208 aaPredicted RBP12□□□□□ -0.49
C9orf3-210ENST00000462125 MBD3L5A6NJ08 208 aaPredicted RBP12□□□□□ -0.49
C9orf3-210ENST00000462125 TMEM114B3SHH9 223 aa12□□□□□ -0.49
C9orf3-210ENST00000462125 PDPK1O15530 556 aa12□□□□□ -0.49
C9orf3-210ENST00000462125 AKAP10O43572 662 aa12□□□□□ -0.49
C9orf3-210ENST00000462125 NKX2-2O95096 273 aa12□□□□□ -0.49
C9orf3-210ENST00000462125 IL2RAP01589 272 aa12□□□□□ -0.49
C9orf3-210ENST00000462125 CHMP24386 653 aa12□□□□□ -0.49
C9orf3-210ENST00000462125 GABRA3P34903 492 aa12□□□□□ -0.49
C9orf3-210ENST00000462125 EVI2BP34910 448 aa12□□□□□ -0.49
C9orf3-210ENST00000462125 GCKP35557 465 aa12□□□□□ -0.49
C9orf3-210ENST00000462125 MANFP55145 182 aaKnown RBP12□□□□□ -0.49
C9orf3-210ENST00000462125 DLX5P56178 289 aa12□□□□□ -0.49
C9orf3-210ENST00000462125 KRTAP10-9P60411 292 aa12□□□□□ -0.49
C9orf3-210ENST00000462125 GUCY1A3Q02108 690 aa12□□□□□ -0.49
C9orf3-210ENST00000462125 TLE4Q04727 773 aa12□□□□□ -0.49
C9orf3-210ENST00000462125 ZNHIT3Q15649 155 aaPredicted RBP12□□□□□ -0.49
C9orf3-210ENST00000462125 ZSCAN26Q16670 478 aa12□□□□□ -0.49
C9orf3-210ENST00000462125 FBXL19-AS1Q494R0 122 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms