RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 RBM28Q9NW13 759 aaKnown RBP2.43□□□□□ -2.02
HDAC6-212ENST00000461608 IMPAD1Q9NX62 359 aa2.43□□□□□ -2.02
HDAC6-212ENST00000461608 AATFQ9NY61 560 aaKnown RBP eCLIP2.43□□□□□ -2.02
HDAC6-212ENST00000461608 EHFQ9NZC4 300 aa2.43□□□□□ -2.02
HDAC6-212ENST00000461608 KLK13Q9UKR3 277 aa2.43□□□□□ -2.02
HDAC6-212ENST00000461608 OBSCNQ5VST9 7968 aa2.43□□□□□ -2.02
HDAC6-212ENST00000461608 KIF16BQ96L93 1317 aa2.42□□□□□ -2.02
HDAC6-212ENST00000461608 MBLAC1A4D2B0 266 aaPredicted RBP2.42□□□□□ -2.02
HDAC6-212ENST00000461608 PPIAL4DF5H284 164 aa2.42□□□□□ -2.02
HDAC6-212ENST00000461608 K7ERI5 159 aa2.42□□□□□ -2.02
HDAC6-212ENST00000461608 CTAGE5O15320 804 aa2.42□□□□□ -2.02
HDAC6-212ENST00000461608 TRIM3O75382 744 aaPredicted RBP2.42□□□□□ -2.02
HDAC6-212ENST00000461608 STX11O75558 287 aa2.42□□□□□ -2.02
HDAC6-212ENST00000461608 PRAMEF12O95522 483 aa2.42□□□□□ -2.02
HDAC6-212ENST00000461608 HPP00738 406 aa2.42□□□□□ -2.02
HDAC6-212ENST00000461608 RENP00797 406 aa2.42□□□□□ -2.02
HDAC6-212ENST00000461608 CGAP01215 116 aa2.42□□□□□ -2.02
HDAC6-212ENST00000461608 OPN1LWP04000 364 aa2.42□□□□□ -2.02
HDAC6-212ENST00000461608 SERPINB2P05120 415 aa2.42□□□□□ -2.02
HDAC6-212ENST00000461608 PDHBP11177 359 aa2.42□□□□□ -2.02
HDAC6-212ENST00000461608 ANXA3P12429 323 aa2.42□□□□□ -2.02
HDAC6-212ENST00000461608 KRT13P13646 458 aa2.42□□□□□ -2.02
HDAC6-212ENST00000461608 SDC1P18827 310 aa2.42□□□□□ -2.02
HDAC6-212ENST00000461608 TSPAN8P19075 237 aa2.42□□□□□ -2.02
HDAC6-212ENST00000461608 HNRNPA2B1P22626 353 aaKnown RBP2.42□□□□□ -2.02
HDAC6-212ENST00000461608 HAND2P61296 217 aa2.42□□□□□ -2.02
HDAC6-212ENST00000461608 RND3P61587 244 aa2.42□□□□□ -2.02
HDAC6-212ENST00000461608 TMEM44Q2T9K0 475 aa2.42□□□□□ -2.02
HDAC6-212ENST00000461608 CCDC57Q2TAC2 916 aa2.42□□□□□ -2.02
HDAC6-212ENST00000461608 LRRC23Q53EV4 343 aaPredicted RBP2.42□□□□□ -2.02
HDAC6-212ENST00000461608 MS4A13Q5J8X5 152 aa2.42□□□□□ -2.02
HDAC6-212ENST00000461608 RFWD3Q6PCD5 774 aa2.42□□□□□ -2.02
HDAC6-212ENST00000461608 HACD2Q6Y1H2 254 aa2.42□□□□□ -2.02
HDAC6-212ENST00000461608 ADAMTSL5Q6ZMM2 481 aa2.42□□□□□ -2.02
HDAC6-212ENST00000461608 GCNT7Q6ZNI0 430 aa2.42□□□□□ -2.02
HDAC6-212ENST00000461608 LHFPL4Q7Z7J7 247 aa2.42□□□□□ -2.02
HDAC6-212ENST00000461608 SLC25A42Q86VD7 318 aa2.42□□□□□ -2.02
HDAC6-212ENST00000461608 SERINC5Q86VE9 423 aa2.42□□□□□ -2.02
HDAC6-212ENST00000461608 PARGQ86W56 976 aa2.42□□□□□ -2.02
HDAC6-212ENST00000461608 TMEM17Q86X19 198 aa2.42□□□□□ -2.02
HDAC6-212ENST00000461608 FGFRL1Q8N441 504 aa2.42□□□□□ -2.02
HDAC6-212ENST00000461608 ZSCAN4Q8NAM6 433 aaPredicted RBP2.42□□□□□ -2.02
HDAC6-212ENST00000461608 ZNF540Q8NDQ6 660 aa2.42□□□□□ -2.02
HDAC6-212ENST00000461608 OR4F17Q8NGA8 305 aa2.42□□□□□ -2.02
HDAC6-212ENST00000461608 OR4Q3Q8NH05 313 aa2.42□□□□□ -2.02
HDAC6-212ENST00000461608 OR2L2Q8NH16 312 aa2.42□□□□□ -2.02
HDAC6-212ENST00000461608 FBXO30Q8TB52 745 aa2.42□□□□□ -2.02
HDAC6-212ENST00000461608 RAET1EQ8TD07 263 aa2.42□□□□□ -2.02
HDAC6-212ENST00000461608 MYLPFQ96A32 169 aa2.42□□□□□ -2.02
HDAC6-212ENST00000461608 ADIPOR1Q96A54 375 aa2.42□□□□□ -2.02
HDAC6-212ENST00000461608 ZBED6CLQ96FA7 236 aaPredicted RBP2.42□□□□□ -2.02
HDAC6-212ENST00000461608 OR4F4Q96R69 305 aa2.42□□□□□ -2.02
HDAC6-212ENST00000461608 ALG12Q9BV10 488 aa2.42□□□□□ -2.02
HDAC6-212ENST00000461608 UBXN6Q9BZV1 441 aa2.42□□□□□ -2.02
HDAC6-212ENST00000461608 COMMD4Q9H0A8 199 aa2.42□□□□□ -2.02
HDAC6-212ENST00000461608 SLC25A51Q9H1U9 297 aa2.42□□□□□ -2.02
HDAC6-212ENST00000461608 ADNPQ9H2P0 1102 aa2.42□□□□□ -2.02
HDAC6-212ENST00000461608 FAM120CQ9NX05 1096 aaKnown RBP2.42□□□□□ -2.02
HDAC6-212ENST00000461608 CLEC5AQ9NY25 188 aa2.42□□□□□ -2.02
HDAC6-212ENST00000461608 MRPL39Q9NYK5 338 aaKnown RBP2.42□□□□□ -2.02
HDAC6-212ENST00000461608 AIPL1Q9NZN9 384 aa2.42□□□□□ -2.02
HDAC6-212ENST00000461608 TMOD2Q9NZR1 351 aa2.42□□□□□ -2.02
HDAC6-212ENST00000461608 CRLS1Q9UJA2 301 aa2.42□□□□□ -2.02
HDAC6-212ENST00000461608 BARX2Q9UMQ3 279 aaPredicted RBP2.42□□□□□ -2.02
HDAC6-212ENST00000461608 SNX6Q9UNH7 406 aa2.42□□□□□ -2.02
HDAC6-212ENST00000461608 RNF24Q9Y225 148 aa2.42□□□□□ -2.02
HDAC6-212ENST00000461608 PARD3Q8TEW0 1356 aa2.41□□□□□ -2.02
HDAC6-212ENST00000461608 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.41□□□□□ -2.02
HDAC6-212ENST00000461608 IMPA2O14732 288 aa2.41□□□□□ -2.02
HDAC6-212ENST00000461608 LRRTM2O43300 516 aa2.41□□□□□ -2.02
HDAC6-212ENST00000461608 PPIHO43447 177 aaKnown RBP2.41□□□□□ -2.02
HDAC6-212ENST00000461608 LCMT2O60294 686 aaKnown RBP2.41□□□□□ -2.02
HDAC6-212ENST00000461608 TPST2O60704 377 aa2.41□□□□□ -2.02
HDAC6-212ENST00000461608 GALR3O60755 368 aaPredicted RBP2.41□□□□□ -2.02
HDAC6-212ENST00000461608 MELTFP08582 738 aa2.41□□□□□ -2.02
HDAC6-212ENST00000461608 IGFBP1P08833 259 aaPredicted RBP2.41□□□□□ -2.02
HDAC6-212ENST00000461608 WNT2P09544 360 aa2.41□□□□□ -2.02
HDAC6-212ENST00000461608 CT45A10P0DMU9 189 aa2.41□□□□□ -2.02
HDAC6-212ENST00000461608 CYLC1P35663 651 aaPredicted RBP2.41□□□□□ -2.02
HDAC6-212ENST00000461608 RPL4P36578 427 aaKnown RBP2.41□□□□□ -2.02
HDAC6-212ENST00000461608 HSD17B7P56937 341 aa2.41□□□□□ -2.02
HDAC6-212ENST00000461608 RPS6P62753 249 aaKnown RBP2.41□□□□□ -2.02
HDAC6-212ENST00000461608 NTHL1P78549 312 aa2.41□□□□□ -2.02
HDAC6-212ENST00000461608 ZNF33BQ06732 778 aa2.41□□□□□ -2.02
HDAC6-212ENST00000461608 CRMP1Q14194 572 aa2.41□□□□□ -2.02
HDAC6-212ENST00000461608 ATXN7L3Q14CW9 347 aaPredicted RBP2.41□□□□□ -2.02
HDAC6-212ENST00000461608 UBE2V2Q15819 145 aa2.41□□□□□ -2.02
HDAC6-212ENST00000461608 CAMK4Q16566 473 aa2.41□□□□□ -2.02
HDAC6-212ENST00000461608 PDK4Q16654 411 aa2.41□□□□□ -2.02
HDAC6-212ENST00000461608 LINC01620Q4KN68 170 aa2.41□□□□□ -2.02
HDAC6-212ENST00000461608 SEL1L2Q5TEA6 688 aa2.41□□□□□ -2.02
HDAC6-212ENST00000461608 SLX4IPQ5VYV7 408 aa2.41□□□□□ -2.02
HDAC6-212ENST00000461608 FAM219BQ5XKK7 198 aa2.41□□□□□ -2.02
HDAC6-212ENST00000461608 BTNL3Q6UXE8 466 aa2.41□□□□□ -2.02
HDAC6-212ENST00000461608 GPRIN3Q6ZVF9 776 aa2.41□□□□□ -2.02
HDAC6-212ENST00000461608 Q7L0L9 218 aa2.41□□□□□ -2.02
HDAC6-212ENST00000461608 HSD11B1LQ7Z5J1 315 aa2.41□□□□□ -2.02
HDAC6-212ENST00000461608 GTSCR1Q86UQ5 136 aa2.41□□□□□ -2.02
HDAC6-212ENST00000461608 SLC22A18ASQ8N1D0 253 aa2.41□□□□□ -2.02
HDAC6-212ENST00000461608 MAPK1IP1LQ8NDC0 245 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms