RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 AKTIPQ9H8T0 292 aa14.05□□□□□ -0.16
VARS-219ENST00000461328 SERHLQ9NQF3 203 aa14.05□□□□□ -0.16
VARS-219ENST00000461328 ZCCHC3Q9NUD5 404 aaKnown RBP14.05□□□□□ -0.16
VARS-219ENST00000461328 PNPOQ9NVS9 261 aa14.05□□□□□ -0.16
VARS-219ENST00000461328 WIF1Q9Y5W5 379 aa14.05□□□□□ -0.16
VARS-219ENST00000461328 NBPF19A0A087WUL8 3843 aa14.04□□□□□ -0.16
VARS-219ENST00000461328 EXPH5Q8NEV8 1989 aa14.04□□□□□ -0.16
VARS-219ENST00000461328 A0A1W2PRB8 838 aa14.04□□□□□ -0.16
VARS-219ENST00000461328 TTC36A6NLP5 189 aa14.04□□□□□ -0.16
VARS-219ENST00000461328 CFLARO15519 480 aa14.04□□□□□ -0.16
VARS-219ENST00000461328 EMC8O43402 210 aa14.04□□□□□ -0.16
VARS-219ENST00000461328 SCO2O43819 266 aa14.04□□□□□ -0.16
VARS-219ENST00000461328 KCNH1O95259 989 aa14.04□□□□□ -0.16
VARS-219ENST00000461328 GLI4P10075 376 aa14.04□□□□□ -0.16
VARS-219ENST00000461328 CYP4B1P13584 511 aa14.04□□□□□ -0.16
VARS-219ENST00000461328 GABRA1P14867 456 aa14.04□□□□□ -0.16
VARS-219ENST00000461328 PTGDSP41222 190 aa14.04□□□□□ -0.16
VARS-219ENST00000461328 FRKP42685 505 aaPredicted RBP14.04□□□□□ -0.16
VARS-219ENST00000461328 KIR3DL1P43629 444 aa14.04□□□□□ -0.16
VARS-219ENST00000461328 PNLIPRP2P54317 469 aa14.04□□□□□ -0.16
VARS-219ENST00000461328 PSMD4P55036 377 aaKnown RBP14.04□□□□□ -0.16
VARS-219ENST00000461328 SMU1Q2TAY7 513 aa14.04□□□□□ -0.16
VARS-219ENST00000461328 PGS1Q32NB8 556 aa14.04□□□□□ -0.16
VARS-219ENST00000461328 C1orf185Q5T7R7 199 aa14.04□□□□□ -0.16
VARS-219ENST00000461328 AGBL2Q5U5Z8 902 aa14.04□□□□□ -0.16
VARS-219ENST00000461328 FNDC7Q5VTL7 733 aa14.04□□□□□ -0.16
VARS-219ENST00000461328 GOLGA6L1Q8N7Z2 621 aa14.04□□□□□ -0.16
VARS-219ENST00000461328 CDRT4Q8N9R6 151 aa14.04□□□□□ -0.16
VARS-219ENST00000461328 LILRB4Q8NHJ6 448 aa14.04□□□□□ -0.16
VARS-219ENST00000461328 DTNBP1Q96EV8 351 aa14.04□□□□□ -0.16
VARS-219ENST00000461328 RMND5BQ96G75 393 aaPredicted RBP14.04□□□□□ -0.16
VARS-219ENST00000461328 LMF2Q9BU23 707 aaKnown RBP14.04□□□□□ -0.16
VARS-219ENST00000461328 THAP1Q9NVV9 213 aa14.04□□□□□ -0.16
VARS-219ENST00000461328 MARCOQ9UEW3 520 aaPredicted RBP14.04□□□□□ -0.16
VARS-219ENST00000461328 HAO1Q9UJM8 370 aa14.04□□□□□ -0.16
VARS-219ENST00000461328 FAM215AQ9Y5M1 114 aa14.04□□□□□ -0.16
VARS-219ENST00000461328 DNAJC13O75165 2243 aa14.04□□□□□ -0.16
VARS-219ENST00000461328 HPNP05981 417 aa14.03□□□□□ -0.16
VARS-219ENST00000461328 HOXD4P09016 255 aaPredicted RBP14.03□□□□□ -0.16
VARS-219ENST00000461328 KITP10721 976 aa14.03□□□□□ -0.16
VARS-219ENST00000461328 LBPP18428 481 aa14.03□□□□□ -0.16
VARS-219ENST00000461328 PTPN6P29350 595 aa14.03□□□□□ -0.16
VARS-219ENST00000461328 EVI2BP34910 448 aa14.03□□□□□ -0.16
VARS-219ENST00000461328 SOAT1P35610 550 aa14.03□□□□□ -0.16
VARS-219ENST00000461328 SLC18A1P54219 525 aa14.03□□□□□ -0.16
VARS-219ENST00000461328 STX5Q13190 355 aa14.03□□□□□ -0.16
VARS-219ENST00000461328 GAB1Q13480 694 aa14.03□□□□□ -0.16
VARS-219ENST00000461328 LSM12Q3MHD2 195 aaKnown RBP14.03□□□□□ -0.16
VARS-219ENST00000461328 RTL6Q6ICC9 239 aa14.03□□□□□ -0.16
VARS-219ENST00000461328 MEX3BQ6ZN04 569 aaKnown RBP14.03□□□□□ -0.16
VARS-219ENST00000461328 NATD1Q8N6N6 113 aa14.03□□□□□ -0.16
VARS-219ENST00000461328 OR4K17Q8NGC6 315 aa14.03□□□□□ -0.16
VARS-219ENST00000461328 RAB3IL1Q8TBN0 382 aa14.03□□□□□ -0.16
VARS-219ENST00000461328 PIK3R3Q92569 461 aa14.03□□□□□ -0.16
VARS-219ENST00000461328 DUSP26Q9BV47 211 aa14.03□□□□□ -0.16
VARS-219ENST00000461328 UCK2Q9BZX2 261 aa14.03□□□□□ -0.16
VARS-219ENST00000461328 DPY30Q9C005 99 aa14.03□□□□□ -0.16
VARS-219ENST00000461328 UBQLN3Q9H347 655 aa14.03□□□□□ -0.16
VARS-219ENST00000461328 KCNJ16Q9NPI9 418 aa14.03□□□□□ -0.16
VARS-219ENST00000461328 ASIC5Q9NY37 505 aa14.03□□□□□ -0.16
VARS-219ENST00000461328 PPP4R1LQ9P1A2 415 aa14.03□□□□□ -0.16
VARS-219ENST00000461328 DKKL1Q9UK85 242 aa14.03□□□□□ -0.16
VARS-219ENST00000461328 SLC6A5Q9Y345 797 aa14.03□□□□□ -0.16
VARS-219ENST00000461328 NINQ8N4C6 2090 aa14.03□□□□□ -0.16
VARS-219ENST00000461328 CACNA1CQ13936 2221 aa14.02□□□□□ -0.16
VARS-219ENST00000461328 NCKAP5O14513 1909 aa14.02□□□□□ -0.16
VARS-219ENST00000461328 GXYLT2A0PJZ3 443 aa14.02□□□□□ -0.17
VARS-219ENST00000461328 NKX2-6A6NCS4 301 aa14.02□□□□□ -0.17
VARS-219ENST00000461328 FAM47E-STBD1D6RA91 191 aa14.02□□□□□ -0.17
VARS-219ENST00000461328 IL33O95760 270 aa14.02□□□□□ -0.17
VARS-219ENST00000461328 C6orf47O95873 294 aa14.02□□□□□ -0.17
VARS-219ENST00000461328 ALOX5P09917 674 aa14.02□□□□□ -0.17
VARS-219ENST00000461328 TCEA1P23193 301 aaKnown RBP14.02□□□□□ -0.17
VARS-219ENST00000461328 PRIM2P49643 509 aa14.02□□□□□ -0.17
VARS-219ENST00000461328 CLK3P49761 638 aaKnown RBP14.02□□□□□ -0.17
VARS-219ENST00000461328 DIO3P55073 304 aa14.02□□□□□ -0.17
VARS-219ENST00000461328 CLDN8P56748 225 aa14.02□□□□□ -0.17
VARS-219ENST00000461328 TP53BP2Q13625 1128 aa14.02□□□□□ -0.17
VARS-219ENST00000461328 MLC1Q15049 377 aa14.02□□□□□ -0.17
VARS-219ENST00000461328 EIPR1Q53HC9 387 aa14.02□□□□□ -0.17
VARS-219ENST00000461328 WIPI1Q5MNZ9 446 aaPredicted RBP14.02□□□□□ -0.17
VARS-219ENST00000461328 MFSD12Q6NUT3 480 aa14.02□□□□□ -0.17
VARS-219ENST00000461328 YRDCQ86U90 279 aaKnown RBP14.02□□□□□ -0.17
VARS-219ENST00000461328 PLCZ1Q86YW0 608 aa14.02□□□□□ -0.17
VARS-219ENST00000461328 ULK2Q8IYT8 1036 aa14.02□□□□□ -0.17
VARS-219ENST00000461328 FAM83FQ8NEG4 500 aaPredicted RBP14.02□□□□□ -0.17
VARS-219ENST00000461328 OR14L1PQ8NHC6 308 aa14.02□□□□□ -0.17
VARS-219ENST00000461328 OR5P2Q8WZ92 322 aa14.02□□□□□ -0.17
VARS-219ENST00000461328 ARL8AQ96BM9 186 aa14.02□□□□□ -0.17
VARS-219ENST00000461328 FAM120BQ96EK7 910 aaKnown RBP14.02□□□□□ -0.17
VARS-219ENST00000461328 OTUB1Q96FW1 271 aaPredicted RBP14.02□□□□□ -0.17
VARS-219ENST00000461328 SPOCK3Q9BQ16 436 aa14.02□□□□□ -0.17
VARS-219ENST00000461328 YIPF4Q9BSR8 244 aa14.02□□□□□ -0.17
VARS-219ENST00000461328 TRIM8Q9BZR9 551 aa14.02□□□□□ -0.17
VARS-219ENST00000461328 BHLHE41Q9C0J9 482 aaPredicted RBP14.02□□□□□ -0.17
VARS-219ENST00000461328 MANSC1Q9H8J5 431 aa14.02□□□□□ -0.17
VARS-219ENST00000461328 MEAF6Q9HAF1 191 aa14.02□□□□□ -0.17
VARS-219ENST00000461328 NEUROD4Q9HD90 331 aa14.02□□□□□ -0.17
VARS-219ENST00000461328 ABCG2Q9UNQ0 655 aa14.02□□□□□ -0.17
VARS-219ENST00000461328 PCDHGB3Q9Y5G1 929 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms