RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 SDCCAG3Q96C92 435 aa12.14□□□□□ -0.47
RAB11FIP3-207ENST00000461009 FAM120BQ96EK7 910 aaKnown RBP12.14□□□□□ -0.47
RAB11FIP3-207ENST00000461009 COL21A1Q96P44 957 aa12.14□□□□□ -0.47
RAB11FIP3-207ENST00000461009 MS4A4EQ96PG1 132 aa12.14□□□□□ -0.47
RAB11FIP3-207ENST00000461009 TTTY12Q9BZ98 90 aa12.14□□□□□ -0.47
RAB11FIP3-207ENST00000461009 LDAHQ9H6V9 325 aa12.14□□□□□ -0.47
RAB11FIP3-207ENST00000461009 EXO5Q9H790 373 aa12.14□□□□□ -0.47
RAB11FIP3-207ENST00000461009 METTL7AQ9H8H3 244 aa12.14□□□□□ -0.47
RAB11FIP3-207ENST00000461009 ZIM2Q9NZV7 527 aa12.14□□□□□ -0.47
RAB11FIP3-207ENST00000461009 BOKQ9UMX3 212 aaPredicted RBP12.14□□□□□ -0.47
RAB11FIP3-207ENST00000461009 FAF1Q9UNN5 650 aaPredicted RBP12.14□□□□□ -0.47
RAB11FIP3-207ENST00000461009 PCDHGB3Q9Y5G1 929 aa12.14□□□□□ -0.47
RAB11FIP3-207ENST00000461009 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.14□□□□□ -0.47
RAB11FIP3-207ENST00000461009 EXPH5Q8NEV8 1989 aa12.14□□□□□ -0.47
RAB11FIP3-207ENST00000461009 GTF3C1Q12789 2109 aa12.13□□□□□ -0.47
RAB11FIP3-207ENST00000461009 NBPF19A0A087WUL8 3843 aa12.13□□□□□ -0.47
RAB11FIP3-207ENST00000461009 FIGNL2A6NMB9 653 aa12.13□□□□□ -0.47
RAB11FIP3-207ENST00000461009 G3V3Y1 287 aa12.13□□□□□ -0.47
RAB11FIP3-207ENST00000461009 KCNH1O95259 989 aa12.13□□□□□ -0.47
RAB11FIP3-207ENST00000461009 CPSF4O95639 269 aaKnown RBP12.13□□□□□ -0.47
RAB11FIP3-207ENST00000461009 ALOX5P09917 674 aa12.13□□□□□ -0.47
RAB11FIP3-207ENST00000461009 TROVE2P10155 538 aaKnown RBP eCLIP12.13□□□□□ -0.47
RAB11FIP3-207ENST00000461009 GRNP28799 593 aaKnown RBP12.13□□□□□ -0.47
RAB11FIP3-207ENST00000461009 PIGAP37287 484 aa12.13□□□□□ -0.47
RAB11FIP3-207ENST00000461009 CASP3P42574 277 aa12.13□□□□□ -0.47
RAB11FIP3-207ENST00000461009 KCNJ2P63252 427 aa12.13□□□□□ -0.47
RAB11FIP3-207ENST00000461009 HBA1P69905 142 aa12.13□□□□□ -0.47
RAB11FIP3-207ENST00000461009 PSG6Q00889 435 aa12.13□□□□□ -0.47
RAB11FIP3-207ENST00000461009 GAB1Q13480 694 aa12.13□□□□□ -0.47
RAB11FIP3-207ENST00000461009 TP53BP2Q13625 1128 aa12.13□□□□□ -0.47
RAB11FIP3-207ENST00000461009 SPANXN4Q5MJ08 99 aa12.13□□□□□ -0.47
RAB11FIP3-207ENST00000461009 SLC30A6Q6NXT4 461 aa12.13□□□□□ -0.47
RAB11FIP3-207ENST00000461009 TMEM81Q6P7N7 255 aa12.13□□□□□ -0.47
RAB11FIP3-207ENST00000461009 NPSR1Q6W5P4 371 aa12.13□□□□□ -0.47
RAB11FIP3-207ENST00000461009 C3P1Q6ZMU1 363 aa12.13□□□□□ -0.47
RAB11FIP3-207ENST00000461009 LURAP1LQ8IV03 231 aa12.13□□□□□ -0.47
RAB11FIP3-207ENST00000461009 OR4A15Q8NGL6 344 aa12.13□□□□□ -0.47
RAB11FIP3-207ENST00000461009 GPR151Q8TDV0 419 aa12.13□□□□□ -0.47
RAB11FIP3-207ENST00000461009 RND1Q92730 232 aa12.13□□□□□ -0.47
RAB11FIP3-207ENST00000461009 SLC35A4Q96G79 324 aa12.13□□□□□ -0.47
RAB11FIP3-207ENST00000461009 RILPQ96NA2 401 aa12.13□□□□□ -0.47
RAB11FIP3-207ENST00000461009 OR52E6Q96RD3 313 aa12.13□□□□□ -0.47
RAB11FIP3-207ENST00000461009 ADOQ96SZ5 270 aa12.13□□□□□ -0.47
RAB11FIP3-207ENST00000461009 DOHHQ9BU89 302 aa12.13□□□□□ -0.47
RAB11FIP3-207ENST00000461009 ANGPTL4Q9BY76 406 aa12.13□□□□□ -0.47
RAB11FIP3-207ENST00000461009 ZDHHC11Q9H8X9 412 aa12.13□□□□□ -0.47
RAB11FIP3-207ENST00000461009 SDR39U1Q9NRG7 319 aaPredicted RBP12.13□□□□□ -0.47
RAB11FIP3-207ENST00000461009 PLSCR2Q9NRY7 297 aa12.13□□□□□ -0.47
RAB11FIP3-207ENST00000461009 SIRT3Q9NTG7 399 aaPredicted RBP12.13□□□□□ -0.47
RAB11FIP3-207ENST00000461009 DEPPQ9NTK1 212 aa12.13□□□□□ -0.47
RAB11FIP3-207ENST00000461009 B4GALT7Q9UBV7 327 aa12.13□□□□□ -0.47
RAB11FIP3-207ENST00000461009 BTNL2Q9UIR0 455 aa12.13□□□□□ -0.47
RAB11FIP3-207ENST00000461009 CNOT11Q9UKZ1 510 aaKnown RBP12.13□□□□□ -0.47
RAB11FIP3-207ENST00000461009 NOTCH2Q04721 2471 aa12.12□□□□□ -0.47
RAB11FIP3-207ENST00000461009 NPIPA2E9PIF3 369 aa12.12□□□□□ -0.47
RAB11FIP3-207ENST00000461009 NPIPA3F8WFD2 350 aa12.12□□□□□ -0.47
RAB11FIP3-207ENST00000461009 ZNHIT1O43257 154 aa12.12□□□□□ -0.47
RAB11FIP3-207ENST00000461009 TSPAN2O60636 221 aa12.12□□□□□ -0.47
RAB11FIP3-207ENST00000461009 NME6O75414 186 aaPredicted RBP12.12□□□□□ -0.47
RAB11FIP3-207ENST00000461009 NKX2-2O95096 273 aa12.12□□□□□ -0.47
RAB11FIP3-207ENST00000461009 PGRP06401 933 aa12.12□□□□□ -0.47
RAB11FIP3-207ENST00000461009 SNRPB2P08579 225 aaKnown RBP12.12□□□□□ -0.47
RAB11FIP3-207ENST00000461009 VIMP08670 466 aaKnown RBP12.12□□□□□ -0.47
RAB11FIP3-207ENST00000461009 UQCRC2P22695 453 aa12.12□□□□□ -0.47
RAB11FIP3-207ENST00000461009 SOAT1P35610 550 aa12.12□□□□□ -0.47
RAB11FIP3-207ENST00000461009 MDH1P40925 334 aaKnown RBP12.12□□□□□ -0.47
RAB11FIP3-207ENST00000461009 MASP1P48740 699 aa12.12□□□□□ -0.47
RAB11FIP3-207ENST00000461009 DNASE1L1P49184 302 aa12.12□□□□□ -0.47
RAB11FIP3-207ENST00000461009 MAN2A2P49641 1150 aa12.12□□□□□ -0.47
RAB11FIP3-207ENST00000461009 CLK3P49761 638 aaKnown RBP12.12□□□□□ -0.47
RAB11FIP3-207ENST00000461009 POLR2JP52435 117 aaKnown RBP12.12□□□□□ -0.47
RAB11FIP3-207ENST00000461009 WNT3P56703 355 aa12.12□□□□□ -0.47
RAB11FIP3-207ENST00000461009 PRAMEF20Q5VT98 475 aa12.12□□□□□ -0.47
RAB11FIP3-207ENST00000461009 MFSD12Q6NUT3 480 aa12.12□□□□□ -0.47
RAB11FIP3-207ENST00000461009 FGD2Q7Z6J4 655 aa12.12□□□□□ -0.47
RAB11FIP3-207ENST00000461009 CHERPQ8IWX8 916 aaKnown RBP12.12□□□□□ -0.47
RAB11FIP3-207ENST00000461009 TRIML2Q8N7C3 387 aa12.12□□□□□ -0.47
RAB11FIP3-207ENST00000461009 ADAMTS15Q8TE58 950 aa12.12□□□□□ -0.47
RAB11FIP3-207ENST00000461009 JADE3Q92613 823 aa12.12□□□□□ -0.47
RAB11FIP3-207ENST00000461009 HOXB13Q92826 284 aaPredicted RBP12.12□□□□□ -0.47
RAB11FIP3-207ENST00000461009 HGDQ93099 445 aa12.12□□□□□ -0.47
RAB11FIP3-207ENST00000461009 SARAFQ96BY9 339 aa12.12□□□□□ -0.47
RAB11FIP3-207ENST00000461009 DTNBP1Q96EV8 351 aa12.12□□□□□ -0.47
RAB11FIP3-207ENST00000461009 CHMP6Q96FZ7 201 aa12.12□□□□□ -0.47
RAB11FIP3-207ENST00000461009 MARK4Q96L34 752 aa12.12□□□□□ -0.47
RAB11FIP3-207ENST00000461009 JSRP1Q96MG2 331 aaPredicted RBP12.12□□□□□ -0.47
RAB11FIP3-207ENST00000461009 DMRTA2Q96SC8 542 aa12.12□□□□□ -0.47
RAB11FIP3-207ENST00000461009 EBF4Q9BQW3 602 aa12.12□□□□□ -0.47
RAB11FIP3-207ENST00000461009 ACTRT3Q9BYD9 372 aa12.12□□□□□ -0.47
RAB11FIP3-207ENST00000461009 RABEP2Q9H5N1 569 aa12.12□□□□□ -0.47
RAB11FIP3-207ENST00000461009 CXorf36Q9H7Y0 433 aa12.12□□□□□ -0.47
RAB11FIP3-207ENST00000461009 RMND5AQ9H871 391 aa12.12□□□□□ -0.47
RAB11FIP3-207ENST00000461009 NPHS2Q9NP85 383 aa12.12□□□□□ -0.47
RAB11FIP3-207ENST00000461009 ZFP64Q9NPA5 681 aa12.12□□□□□ -0.47
RAB11FIP3-207ENST00000461009 GIN1Q9NXP7 522 aa12.12□□□□□ -0.47
RAB11FIP3-207ENST00000461009 TUBA8Q9NY65 449 aaPredicted RBP12.12□□□□□ -0.47
RAB11FIP3-207ENST00000461009 ACAD8Q9UKU7 415 aa12.12□□□□□ -0.47
RAB11FIP3-207ENST00000461009 TRIM33Q9UPN9 1127 aa12.12□□□□□ -0.47
RAB11FIP3-207ENST00000461009 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.11□□□□□ -0.47
RAB11FIP3-207ENST00000461009 FAM234BA2RU67 622 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms