RNA–Protein interactions for RNA: ENST00000460826.1

HDLBP-229, Transcript of high density lipoprotein binding protein, human

TSL 2

Gene HDLBP, Length 442 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-229	ENST00000460826	INA	Q16352	499 aa		12.84	□□□□□ -0.35
HDLBP-229	ENST00000460826	DECR1	Q16698	335 aa		12.84	□□□□□ -0.35
HDLBP-229	ENST00000460826	COX20	Q5RI15	118 aa		12.84	□□□□□ -0.35
HDLBP-229	ENST00000460826	TNFAIP8L2	Q6P589	184 aa	Predicted RBP	12.84	□□□□□ -0.35
HDLBP-229	ENST00000460826	BHLHB9	Q6PI77	547 aa		12.84	□□□□□ -0.35
HDLBP-229	ENST00000460826	FIGNL1	Q6PIW4	674 aa		12.84	□□□□□ -0.35
HDLBP-229	ENST00000460826	OLIG3	Q7RTU3	272 aa		12.84	□□□□□ -0.35
HDLBP-229	ENST00000460826	PIGW	Q7Z7B1	504 aa		12.84	□□□□□ -0.35
HDLBP-229	ENST00000460826	RNF130	Q86XS8	419 aa		12.84	□□□□□ -0.35
HDLBP-229	ENST00000460826	TRIML2	Q8N7C3	387 aa		12.84	□□□□□ -0.35
HDLBP-229	ENST00000460826	FAM110B	Q8TC76	370 aa		12.84	□□□□□ -0.35
HDLBP-229	ENST00000460826	CPT1C	Q8TCG5	803 aa		12.84	□□□□□ -0.35
HDLBP-229	ENST00000460826	PNPT1	Q8TCS8	783 aa	Known RBP	12.84	□□□□□ -0.35
HDLBP-229	ENST00000460826	MIPOL1	Q8TD10	442 aa		12.84	□□□□□ -0.35
HDLBP-229	ENST00000460826	NTNG2	Q96CW9	530 aa		12.84	□□□□□ -0.35
HDLBP-229	ENST00000460826	FRMD6	Q96NE9	622 aa		12.84	□□□□□ -0.35
HDLBP-229	ENST00000460826	TUBA8	Q9NY65	449 aa	Predicted RBP	12.84	□□□□□ -0.35
HDLBP-229	ENST00000460826	SLC25A37	Q9NYZ2	338 aa		12.84	□□□□□ -0.35
HDLBP-229	ENST00000460826	CNIH4	Q9P003	139 aa		12.84	□□□□□ -0.35
HDLBP-229	ENST00000460826	ADAM21	Q9UKJ8	722 aa		12.84	□□□□□ -0.35
HDLBP-229	ENST00000460826	PCDHB14	Q9Y5E9	798 aa		12.84	□□□□□ -0.35
HDLBP-229	ENST00000460826	HRH3	Q9Y5N1	445 aa		12.84	□□□□□ -0.35
HDLBP-229	ENST00000460826	MED12	Q93074	2177 aa		12.84	□□□□□ -0.35
HDLBP-229	ENST00000460826	MYO18B	Q8IUG5	2567 aa		12.83	□□□□□ -0.35
HDLBP-229	ENST00000460826		A0A096LPI6	279 aa		12.83	□□□□□ -0.36
HDLBP-229	ENST00000460826	TRBV5-3	A0A0A0MS03	114 aa		12.83	□□□□□ -0.36
HDLBP-229	ENST00000460826	KLRC4-KLRK1	H3BQV0	150 aa		12.83	□□□□□ -0.36
HDLBP-229	ENST00000460826	FBP2	O00757	339 aa		12.83	□□□□□ -0.36
HDLBP-229	ENST00000460826	ADAM10	O14672	748 aa		12.83	□□□□□ -0.36
HDLBP-229	ENST00000460826	SLC28A2	O43868	658 aa		12.83	□□□□□ -0.36
HDLBP-229	ENST00000460826	SHOX2	O60902	331 aa	Predicted RBP	12.83	□□□□□ -0.36
HDLBP-229	ENST00000460826	ICOSLG	O75144	302 aa		12.83	□□□□□ -0.36
HDLBP-229	ENST00000460826	KCNH1	O95259	989 aa		12.83	□□□□□ -0.36
HDLBP-229	ENST00000460826	ANP32D	O95626	131 aa		12.83	□□□□□ -0.36
HDLBP-229	ENST00000460826	SNRPB2	P08579	225 aa	Known RBP	12.83	□□□□□ -0.36
HDLBP-229	ENST00000460826	KRT16	P08779	473 aa		12.83	□□□□□ -0.36
HDLBP-229	ENST00000460826	OR12D1	P0DN82	309 aa		12.83	□□□□□ -0.36
HDLBP-229	ENST00000460826	MVD	P53602	400 aa		12.83	□□□□□ -0.36
HDLBP-229	ENST00000460826	POU6F2	P78424	691 aa	Predicted RBP	12.83	□□□□□ -0.36
HDLBP-229	ENST00000460826	FOXO1	Q12778	655 aa		12.83	□□□□□ -0.36
HDLBP-229	ENST00000460826	EFR3A	Q14156	821 aa		12.83	□□□□□ -0.36
HDLBP-229	ENST00000460826	LRIF1	Q5T3J3	769 aa		12.83	□□□□□ -0.36
HDLBP-229	ENST00000460826	ZNF324B	Q6AW86	544 aa	Predicted RBP	12.83	□□□□□ -0.36
HDLBP-229	ENST00000460826	ANGPTL8	Q6UXH0	198 aa		12.83	□□□□□ -0.36
HDLBP-229	ENST00000460826	MTDH	Q86UE4	582 aa	Known RBP	12.83	□□□□□ -0.36
HDLBP-229	ENST00000460826	ZFP62	Q8NB50	900 aa	Predicted RBP	12.83	□□□□□ -0.36
HDLBP-229	ENST00000460826	RNF138	Q8WVD3	245 aa		12.83	□□□□□ -0.36
HDLBP-229	ENST00000460826	RAB8B	Q92930	207 aa		12.83	□□□□□ -0.36
HDLBP-229	ENST00000460826	SECISBP2	Q96T21	854 aa	Known RBP	12.83	□□□□□ -0.36
HDLBP-229	ENST00000460826	BARD1	Q99728	777 aa	Known RBP	12.83	□□□□□ -0.36
HDLBP-229	ENST00000460826	FAM173A	Q9BQD7	235 aa		12.83	□□□□□ -0.36
HDLBP-229	ENST00000460826	BTBD2	Q9BX70	525 aa		12.83	□□□□□ -0.36
HDLBP-229	ENST00000460826	ANGPTL4	Q9BY76	406 aa		12.83	□□□□□ -0.36
HDLBP-229	ENST00000460826	TPT1P8	Q9HAU6	139 aa		12.83	□□□□□ -0.36
HDLBP-229	ENST00000460826	GALNT9	Q9HCQ5	603 aa		12.83	□□□□□ -0.36
HDLBP-229	ENST00000460826	GIN1	Q9NXP7	522 aa		12.83	□□□□□ -0.36
HDLBP-229	ENST00000460826	LEF1	Q9UJU2	399 aa	Predicted RBP	12.83	□□□□□ -0.36
HDLBP-229	ENST00000460826	CAPN7	Q9Y6W3	813 aa		12.83	□□□□□ -0.36
HDLBP-229	ENST00000460826	POLE	Q07864	2286 aa		12.82	□□□□□ -0.36
HDLBP-229	ENST00000460826	ESPL1	Q14674	2120 aa		12.82	□□□□□ -0.36
HDLBP-229	ENST00000460826	PRAMEF27	A3QJZ7	478 aa		12.82	□□□□□ -0.36
HDLBP-229	ENST00000460826	ANKRD33B	A6NCL7	494 aa		12.82	□□□□□ -0.36
HDLBP-229	ENST00000460826	C2orf72	A6NCS6	295 aa		12.82	□□□□□ -0.36
HDLBP-229	ENST00000460826	PRAMEF25	A6NGN4	478 aa		12.82	□□□□□ -0.36
HDLBP-229	ENST00000460826	LRRC3C	A6NJW4	275 aa		12.82	□□□□□ -0.36
HDLBP-229	ENST00000460826	C17orf51	A8MQB3	221 aa		12.82	□□□□□ -0.36
HDLBP-229	ENST00000460826	FADS1	O60427	444 aa		12.82	□□□□□ -0.36
HDLBP-229	ENST00000460826	ABCB7	O75027	752 aa		12.82	□□□□□ -0.36
HDLBP-229	ENST00000460826	UNC5C	O95185	931 aa		12.82	□□□□□ -0.36
HDLBP-229	ENST00000460826	UTS2	O95399	124 aa		12.82	□□□□□ -0.36
HDLBP-229	ENST00000460826	MST1	P26927	711 aa		12.82	□□□□□ -0.36
HDLBP-229	ENST00000460826	KHK	P50053	298 aa		12.82	□□□□□ -0.36
HDLBP-229	ENST00000460826	FUT5	Q11128	374 aa		12.82	□□□□□ -0.36
HDLBP-229	ENST00000460826	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	12.82	□□□□□ -0.36
HDLBP-229	ENST00000460826	GRAMD1B	Q3KR37	738 aa		12.82	□□□□□ -0.36
HDLBP-229	ENST00000460826	DCST2	Q5T1A1	773 aa		12.82	□□□□□ -0.36
HDLBP-229	ENST00000460826	DDX59	Q5T1V6	619 aa	Known RBP eCLIP	12.82	□□□□□ -0.36
HDLBP-229	ENST00000460826	TMEM81	Q6P7N7	255 aa		12.82	□□□□□ -0.36
HDLBP-229	ENST00000460826	FAM180A	Q6UWF9	173 aa		12.82	□□□□□ -0.36
HDLBP-229	ENST00000460826	DLEU7	Q6UYE1	221 aa		12.82	□□□□□ -0.36
HDLBP-229	ENST00000460826	SNX32	Q86XE0	403 aa		12.82	□□□□□ -0.36
HDLBP-229	ENST00000460826	TREML1	Q86YW5	311 aa		12.82	□□□□□ -0.36
HDLBP-229	ENST00000460826	FAM98A	Q8NCA5	519 aa	Known RBP	12.82	□□□□□ -0.36
HDLBP-229	ENST00000460826	TSPEAR	Q8WU66	669 aa		12.82	□□□□□ -0.36
HDLBP-229	ENST00000460826	FAR1	Q8WVX9	515 aa		12.82	□□□□□ -0.36
HDLBP-229	ENST00000460826	CCT8L2	Q96SF2	557 aa		12.82	□□□□□ -0.36
HDLBP-229	ENST00000460826	DOHH	Q9BU89	302 aa		12.82	□□□□□ -0.36
HDLBP-229	ENST00000460826	CCDC106	Q9BWC9	280 aa		12.82	□□□□□ -0.36
HDLBP-229	ENST00000460826	RTN4R	Q9BZR6	473 aa		12.82	□□□□□ -0.36
HDLBP-229	ENST00000460826	MYLK2	Q9H1R3	596 aa		12.82	□□□□□ -0.36
HDLBP-229	ENST00000460826	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	12.82	□□□□□ -0.36
HDLBP-229	ENST00000460826	METTL7A	Q9H8H3	244 aa		12.82	□□□□□ -0.36
HDLBP-229	ENST00000460826	VAPA	Q9P0L0	249 aa		12.82	□□□□□ -0.36
HDLBP-229	ENST00000460826	NDUFAF1	Q9Y375	327 aa		12.82	□□□□□ -0.36
HDLBP-229	ENST00000460826	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	12.82	□□□□□ -0.36
HDLBP-229	ENST00000460826	HELZ2	Q9BYK8	2649 aa	Known RBP	12.82	□□□□□ -0.36
HDLBP-229	ENST00000460826	FASN	P49327	2511 aa	Known RBP	12.82	□□□□□ -0.36
HDLBP-229	ENST00000460826	HEATR5A	Q86XA9	2040 aa		12.81	□□□□□ -0.36
HDLBP-229	ENST00000460826	NPIPA5	A0A0B4J1W7	369 aa		12.81	□□□□□ -0.36
HDLBP-229	ENST00000460826	FAM166B	A8MTA8	275 aa		12.81	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms