RNA–Protein interactions for RNA: ENST00000460289.5

PTPN4-208, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-208ENST00000460289 PRPS1L1P21108 318 aa20.95■□□□□ 0.94
PTPN4-208ENST00000460289 GABRA3P34903 492 aa20.95■□□□□ 0.94
PTPN4-208ENST00000460289 CLK3P49761 638 aaKnown RBP20.95■□□□□ 0.94
PTPN4-208ENST00000460289 EMX2Q04743 252 aa20.95■□□□□ 0.94
PTPN4-208ENST00000460289 STX3Q13277 289 aa20.95■□□□□ 0.94
PTPN4-208ENST00000460289 PTGR1Q14914 329 aa20.95■□□□□ 0.94
PTPN4-208ENST00000460289 WDR53Q7Z5U6 358 aaPredicted RBP20.95■□□□□ 0.94
PTPN4-208ENST00000460289 YRDCQ86U90 279 aaKnown RBP20.95■□□□□ 0.94
PTPN4-208ENST00000460289 CCDC71Q8IV32 467 aaPredicted RBP20.95■□□□□ 0.94
PTPN4-208ENST00000460289 OR7A2PQ8NGA2 310 aa20.95■□□□□ 0.94
PTPN4-208ENST00000460289 OR14L1PQ8NHC6 308 aa20.95■□□□□ 0.94
PTPN4-208ENST00000460289 ABTB1Q969K4 478 aaPredicted RBP20.95■□□□□ 0.94
PTPN4-208ENST00000460289 PAIP2Q9BPZ3 127 aaKnown RBP20.95■□□□□ 0.94
PTPN4-208ENST00000460289 KCNJ16Q9NPI9 418 aa20.95■□□□□ 0.94
PTPN4-208ENST00000460289 EQTNQ9NQ60 294 aa20.95■□□□□ 0.94
PTPN4-208ENST00000460289 SDHAF3Q9NRP4 125 aa20.95■□□□□ 0.94
PTPN4-208ENST00000460289 ABCG2Q9UNQ0 655 aa20.95■□□□□ 0.94
PTPN4-208ENST00000460289 PHF3Q92576 2039 aaKnown RBP20.94■□□□□ 0.94
PTPN4-208ENST00000460289 A0A1W2PRB8 838 aa20.94■□□□□ 0.94
PTPN4-208ENST00000460289 BMP7P18075 431 aa20.94■□□□□ 0.94
PTPN4-208ENST00000460289 BGNP21810 368 aa20.94■□□□□ 0.94
PTPN4-208ENST00000460289 EVI2BP34910 448 aa20.94■□□□□ 0.94
PTPN4-208ENST00000460289 ZFP36L2P47974 494 aaKnown RBP20.94■□□□□ 0.94
PTPN4-208ENST00000460289 PRR5P85299 388 aa20.94■□□□□ 0.94
PTPN4-208ENST00000460289 PDCD2Q16342 344 aaPredicted RBP20.94■□□□□ 0.94
PTPN4-208ENST00000460289 BEND6Q5SZJ8 279 aaPredicted RBP20.94■□□□□ 0.94
PTPN4-208ENST00000460289 ZCCHC12Q6PEW1 402 aa20.94■□□□□ 0.94
PTPN4-208ENST00000460289 GPR151Q8TDV0 419 aa20.94■□□□□ 0.94
PTPN4-208ENST00000460289 HOXB13Q92826 284 aaPredicted RBP20.94■□□□□ 0.94
PTPN4-208ENST00000460289 MS4A4EQ96PG1 132 aa20.94■□□□□ 0.94
PTPN4-208ENST00000460289 UGT2B28Q9BY64 529 aa20.94■□□□□ 0.94
PTPN4-208ENST00000460289 OR2B2Q9GZK3 357 aa20.94■□□□□ 0.94
PTPN4-208ENST00000460289 C20orf27Q9GZN8 174 aa20.94■□□□□ 0.94
PTPN4-208ENST00000460289 PRDM14Q9GZV8 571 aa20.94■□□□□ 0.94
PTPN4-208ENST00000460289 NOP53Q9NZM5 478 aaKnown RBP20.94■□□□□ 0.94
PTPN4-208ENST00000460289 MRPS18CQ9Y3D5 142 aaKnown RBP20.94■□□□□ 0.94
PTPN4-208ENST00000460289 CACNA1DQ01668 2161 aa20.94■□□□□ 0.94
PTPN4-208ENST00000460289 C19orf84I3L1E1 186 aa20.93■□□□□ 0.94
PTPN4-208ENST00000460289 FADS1O60427 444 aa20.93■□□□□ 0.94
PTPN4-208ENST00000460289 NKX2-2O95096 273 aa20.93■□□□□ 0.94
PTPN4-208ENST00000460289 EPPINO95925 133 aa20.93■□□□□ 0.94
PTPN4-208ENST00000460289 LAMP1P11279 417 aa20.93■□□□□ 0.94
PTPN4-208ENST00000460289 SRD5A2P31213 254 aa20.93■□□□□ 0.94
PTPN4-208ENST00000460289 MAP3K8P41279 467 aa20.93■□□□□ 0.94
PTPN4-208ENST00000460289 GAS1P54826 345 aa20.93■□□□□ 0.94
PTPN4-208ENST00000460289 LSM12Q3MHD2 195 aaKnown RBP20.93■□□□□ 0.94
PTPN4-208ENST00000460289 RIPPLY2Q5TAB7 128 aa20.93■□□□□ 0.94
PTPN4-208ENST00000460289 SZRD1Q7Z422 152 aa20.93■□□□□ 0.94
PTPN4-208ENST00000460289 ANKRD42Q8N9B4 389 aa20.93■□□□□ 0.94
PTPN4-208ENST00000460289 COQ8BQ96D53 544 aa20.93■□□□□ 0.94
PTPN4-208ENST00000460289 SORT1Q99523 831 aa20.93■□□□□ 0.94
PTPN4-208ENST00000460289 FAM120CQ9NX05 1096 aaKnown RBP20.93■□□□□ 0.94
PTPN4-208ENST00000460289 ASIC5Q9NY37 505 aa20.93■□□□□ 0.94
PTPN4-208ENST00000460289 TAS2R10Q9NYW0 307 aa20.93■□□□□ 0.94
PTPN4-208ENST00000460289 PPP4R1LQ9P1A2 415 aa20.93■□□□□ 0.94
PTPN4-208ENST00000460289 HAO1Q9UJM8 370 aa20.93■□□□□ 0.94
PTPN4-208ENST00000460289 ITPR2Q14571 2701 aa20.92■□□□□ 0.94
PTPN4-208ENST00000460289 FREM3P0C091 2139 aa20.92■□□□□ 0.94
PTPN4-208ENST00000460289 GIMAP1-GIMAP5A0A087WTJ2 511 aa20.92■□□□□ 0.94
PTPN4-208ENST00000460289 A0A0G2JNJ9 132 aa20.92■□□□□ 0.94
PTPN4-208ENST00000460289 G6PDP11413 515 aa20.92■□□□□ 0.94
PTPN4-208ENST00000460289 KIR3DL1P43629 444 aa20.92■□□□□ 0.94
PTPN4-208ENST00000460289 RFX3P48380 749 aa20.92■□□□□ 0.94
PTPN4-208ENST00000460289 SLC18A1P54219 525 aa20.92■□□□□ 0.94
PTPN4-208ENST00000460289 OR5M10Q6IEU7 315 aa20.92■□□□□ 0.94
PTPN4-208ENST00000460289 IFNEQ86WN2 208 aa20.92■□□□□ 0.94
PTPN4-208ENST00000460289 MCEMP1Q8IX19 187 aa20.92■□□□□ 0.94
PTPN4-208ENST00000460289 RIMKLAQ8IXN7 391 aa20.92■□□□□ 0.94
PTPN4-208ENST00000460289 OR5P2Q8WZ92 322 aa20.92■□□□□ 0.94
PTPN4-208ENST00000460289 SLC9A6Q92581 669 aa20.92■□□□□ 0.94
PTPN4-208ENST00000460289 GIMAP5Q96F15 307 aa20.92■□□□□ 0.94
PTPN4-208ENST00000460289 SPOCK3Q9BQ16 436 aa20.92■□□□□ 0.94
PTPN4-208ENST00000460289 AKTIPQ9H8T0 292 aa20.92■□□□□ 0.94
PTPN4-208ENST00000460289 Q9UFV3 132 aa20.92■□□□□ 0.94
PTPN4-208ENST00000460289 CAMK2AQ9UQM7 478 aa20.92■□□□□ 0.94
PTPN4-208ENST00000460289 TMEM120BA0PK00 339 aa20.91■□□□□ 0.94
PTPN4-208ENST00000460289 HSPB2A8KAH6 182 aa20.91■□□□□ 0.94
PTPN4-208ENST00000460289 SCO2O43819 266 aa20.91■□□□□ 0.94
PTPN4-208ENST00000460289 SNRPB2P08579 225 aaKnown RBP20.91■□□□□ 0.94
PTPN4-208ENST00000460289 EFNA1P20827 205 aaPredicted RBP20.91■□□□□ 0.94
PTPN4-208ENST00000460289 PRIM2P49643 509 aa20.91■□□□□ 0.94
PTPN4-208ENST00000460289 CLDN8P56748 225 aa20.91■□□□□ 0.94
PTPN4-208ENST00000460289 C21orf58P58505 322 aa20.91■□□□□ 0.94
PTPN4-208ENST00000460289 BST1Q10588 318 aa20.91■□□□□ 0.94
PTPN4-208ENST00000460289 HSPB2Q16082 182 aa20.91■□□□□ 0.94
PTPN4-208ENST00000460289 ACSF3Q4G176 576 aaPredicted RBP20.91■□□□□ 0.94
PTPN4-208ENST00000460289 MFSD12Q6NUT3 480 aa20.91■□□□□ 0.94
PTPN4-208ENST00000460289 ENPP6Q6UWR7 440 aa20.91■□□□□ 0.94
PTPN4-208ENST00000460289 KRTCAP2Q8N6L1 136 aa20.91■□□□□ 0.94
PTPN4-208ENST00000460289 OR4K17Q8NGC6 315 aa20.91■□□□□ 0.94
PTPN4-208ENST00000460289 PIK3R3Q92569 461 aa20.91■□□□□ 0.94
PTPN4-208ENST00000460289 FAM120BQ96EK7 910 aaKnown RBP20.91■□□□□ 0.94
PTPN4-208ENST00000460289 WDYHV1Q96HA8 205 aa20.91■□□□□ 0.94
PTPN4-208ENST00000460289 PPP1R36Q96LQ0 422 aa20.91■□□□□ 0.94
PTPN4-208ENST00000460289 UCK2Q9BZX2 261 aa20.91■□□□□ 0.94
PTPN4-208ENST00000460289 BHLHE41Q9C0J9 482 aaPredicted RBP20.91■□□□□ 0.94
PTPN4-208ENST00000460289 ZCCHC3Q9NUD5 404 aaKnown RBP20.91■□□□□ 0.94
PTPN4-208ENST00000460289 DKKL1Q9UK85 242 aa20.91■□□□□ 0.94
PTPN4-208ENST00000460289 FBXL2Q9UKC9 423 aa20.91■□□□□ 0.94
PTPN4-208ENST00000460289 GXYLT2A0PJZ3 443 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms