RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 GFM1Q96RP9 751 aaKnown RBP14.49□□□□□ -0.09
LMNB1-203ENST00000460265 TBC1D29Q9UFV1 150 aa14.49□□□□□ -0.09
LMNB1-203ENST00000460265 GNB5O14775 395 aa14.49□□□□□ -0.09
LMNB1-203ENST00000460265 ENTPD6O75354 484 aa14.49□□□□□ -0.09
LMNB1-203ENST00000460265 CDC123O75794 336 aaPredicted RBP14.49□□□□□ -0.09
LMNB1-203ENST00000460265 FHP07954 510 aa14.49□□□□□ -0.09
LMNB1-203ENST00000460265 HIST1H1TP22492 207 aaPredicted RBP14.49□□□□□ -0.09
LMNB1-203ENST00000460265 GRK5P34947 590 aa14.49□□□□□ -0.09
LMNB1-203ENST00000460265 ILF3Q12906 894 aaKnown RBP eCLIP14.49□□□□□ -0.091e-6■■■■□ 22.3
LMNB1-203ENST00000460265 MLF2Q15773 248 aaPredicted RBP14.49□□□□□ -0.09
LMNB1-203ENST00000460265 DUSP6Q16828 381 aa14.49□□□□□ -0.09
LMNB1-203ENST00000460265 OOSP2Q86WS3 158 aa14.49□□□□□ -0.09
LMNB1-203ENST00000460265 SRFBP1Q8NEF9 429 aaKnown RBP14.49□□□□□ -0.09
LMNB1-203ENST00000460265 FCGR1BQ92637 280 aa14.49□□□□□ -0.09
LMNB1-203ENST00000460265 C1GALT1C1Q96EU7 318 aa14.49□□□□□ -0.09
LMNB1-203ENST00000460265 MGLLQ99685 303 aa14.49□□□□□ -0.09
LMNB1-203ENST00000460265 RNF121Q9H920 327 aa14.49□□□□□ -0.09
LMNB1-203ENST00000460265 CD93Q9NPY3 652 aa14.49□□□□□ -0.09
LMNB1-203ENST00000460265 CNIH4Q9P003 139 aa14.49□□□□□ -0.09
LMNB1-203ENST00000460265 CXorf51AA0A1B0GTR3 108 aa14.48□□□□□ -0.09
LMNB1-203ENST00000460265 LRIT2A6NDA9 550 aa14.48□□□□□ -0.09
LMNB1-203ENST00000460265 CLEC2LP0C7M8 214 aa14.48□□□□□ -0.09
LMNB1-203ENST00000460265 LAMP2P13473 410 aa14.48□□□□□ -0.09
LMNB1-203ENST00000460265 MYL12AP19105 171 aa14.48□□□□□ -0.09
LMNB1-203ENST00000460265 LIM2P55344 173 aa14.48□□□□□ -0.09
LMNB1-203ENST00000460265 SMIM11AP58511 58 aa14.48□□□□□ -0.09
LMNB1-203ENST00000460265 CXCR4P61073 352 aa14.48□□□□□ -0.09
LMNB1-203ENST00000460265 ARHGAP19Q14CB8 494 aa14.48□□□□□ -0.09
LMNB1-203ENST00000460265 RPE65Q16518 533 aa14.48□□□□□ -0.09
LMNB1-203ENST00000460265 FAM131AQ6UXB0 335 aa14.48□□□□□ -0.09
LMNB1-203ENST00000460265 USP30Q70CQ3 517 aa14.48□□□□□ -0.09
LMNB1-203ENST00000460265 TIGD4Q8IY51 512 aa14.48□□□□□ -0.09
LMNB1-203ENST00000460265 VWA5B2Q8N398 1253 aa14.48□□□□□ -0.09
LMNB1-203ENST00000460265 FBXO15Q8NCQ5 510 aaPredicted RBP14.48□□□□□ -0.09
LMNB1-203ENST00000460265 OR4K5Q8NGD3 323 aa14.48□□□□□ -0.09
LMNB1-203ENST00000460265 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.48□□□□□ -0.096e-9■■■□□ 15.9
LMNB1-203ENST00000460265 PELI2Q9HAT8 420 aa14.48□□□□□ -0.09
LMNB1-203ENST00000460265 SNTG1Q9NSN8 517 aa14.48□□□□□ -0.09
LMNB1-203ENST00000460265 A0A1W2PRG6 482 aa14.48□□□□□ -0.09
LMNB1-203ENST00000460265 TSPAN19P0C672 248 aa14.48□□□□□ -0.09
LMNB1-203ENST00000460265 TALDO1P37837 337 aa14.48□□□□□ -0.09
LMNB1-203ENST00000460265 KHKP50053 298 aa14.48□□□□□ -0.09
LMNB1-203ENST00000460265 BTN1A1Q13410 526 aa14.48□□□□□ -0.09
LMNB1-203ENST00000460265 CCNJQ5T5M9 372 aa14.48□□□□□ -0.09
LMNB1-203ENST00000460265 MLIPQ5VWP3 458 aa14.48□□□□□ -0.09
LMNB1-203ENST00000460265 FAM46DQ8NEK8 389 aa14.48□□□□□ -0.09
LMNB1-203ENST00000460265 TTLQ8NG68 377 aa14.48□□□□□ -0.09
LMNB1-203ENST00000460265 TEX47Q8TBZ9 253 aa14.48□□□□□ -0.09
LMNB1-203ENST00000460265 ASB15Q8WXK1 588 aa14.48□□□□□ -0.09
LMNB1-203ENST00000460265 LINC00615Q96LM1 132 aaPredicted RBP14.48□□□□□ -0.09
LMNB1-203ENST00000460265 OR5M11Q96RB7 305 aa14.48□□□□□ -0.09
LMNB1-203ENST00000460265 PPIL3Q9H2H8 161 aaKnown RBP14.48□□□□□ -0.09
LMNB1-203ENST00000460265 M0R082 166 aa14.47□□□□□ -0.09
LMNB1-203ENST00000460265 HMGN4O00479 90 aa14.47□□□□□ -0.09
LMNB1-203ENST00000460265 CEACAM5P06731 702 aa14.47□□□□□ -0.09
LMNB1-203ENST00000460265 B2MP61769 119 aa14.47□□□□□ -0.09
LMNB1-203ENST00000460265 LSM11P83369 360 aaKnown RBP eCLIP14.47□□□□□ -0.095e-7■■■■□ 20.7
LMNB1-203ENST00000460265 POU4F3Q15319 338 aa14.47□□□□□ -0.09
LMNB1-203ENST00000460265 DEFB110Q30KQ9 67 aa14.47□□□□□ -0.09
LMNB1-203ENST00000460265 KIF18BQ86Y91 864 aa14.47□□□□□ -0.09
LMNB1-203ENST00000460265 MAPKAP1Q9BPZ7 522 aa14.47□□□□□ -0.09
LMNB1-203ENST00000460265 TEX12Q9BXU0 123 aa14.47□□□□□ -0.09
LMNB1-203ENST00000460265 EIF3KQ9UBQ5 218 aaKnown RBP14.47□□□□□ -0.09
LMNB1-203ENST00000460265 DNMT3AQ9Y6K1 912 aaPredicted RBP14.47□□□□□ -0.09
LMNB1-203ENST00000460265 HSPE1-MOB4S4R3N1 261 aa14.47□□□□□ -0.09
LMNB1-203ENST00000460265 CHD9Q3L8U1 2897 aa14.47□□□□□ -0.09
LMNB1-203ENST00000460265 A0A1W2PR48 441 aa14.47□□□□□ -0.09
LMNB1-203ENST00000460265 AIFM1O95831 613 aa14.47□□□□□ -0.09
LMNB1-203ENST00000460265 ZNF888P0CJ79 500 aaPredicted RBP14.47□□□□□ -0.09
LMNB1-203ENST00000460265 SOX3P41225 446 aa14.47□□□□□ -0.09
LMNB1-203ENST00000460265 MVDP53602 400 aa14.47□□□□□ -0.09
LMNB1-203ENST00000460265 PUM1Q14671 1186 aaKnown RBP eCLIP14.47□□□□□ -0.098e-9■□□□□ 9.1
LMNB1-203ENST00000460265 TMEM196Q5HYL7 178 aa14.47□□□□□ -0.09
LMNB1-203ENST00000460265 ZC3H14Q6PJT7 736 aaKnown RBP14.47□□□□□ -0.09
LMNB1-203ENST00000460265 ZNF793Q6ZN11 406 aa14.47□□□□□ -0.09
LMNB1-203ENST00000460265 DNAJC22Q8N4W6 341 aa14.47□□□□□ -0.09
LMNB1-203ENST00000460265 OR2L3Q8NG85 312 aa14.47□□□□□ -0.09
LMNB1-203ENST00000460265 SP7Q8TDD2 431 aaPredicted RBP14.47□□□□□ -0.09
LMNB1-203ENST00000460265 GPR151Q8TDV0 419 aa14.47□□□□□ -0.09
LMNB1-203ENST00000460265 AMDHD1Q96NU7 426 aa14.47□□□□□ -0.09
LMNB1-203ENST00000460265 BTBD1Q9H0C5 482 aa14.47□□□□□ -0.09
LMNB1-203ENST00000460265 LIN7BQ9HAP6 207 aa14.47□□□□□ -0.09
LMNB1-203ENST00000460265 MCCC2Q9HCC0 563 aa14.47□□□□□ -0.09
LMNB1-203ENST00000460265 SZT2Q5T011 3432 aa14.47□□□□□ -0.09
LMNB1-203ENST00000460265 NARSO43776 548 aaKnown RBP14.47□□□□□ -0.09
LMNB1-203ENST00000460265 LDB3O75112 727 aa14.47□□□□□ -0.09
LMNB1-203ENST00000460265 ALPPP05187 535 aa14.47□□□□□ -0.09
LMNB1-203ENST00000460265 IGFALSP35858 605 aa14.47□□□□□ -0.09
LMNB1-203ENST00000460265 ETV1P50549 477 aa14.47□□□□□ -0.09
LMNB1-203ENST00000460265 CSNK2BP67870 215 aa14.47□□□□□ -0.09
LMNB1-203ENST00000460265 KLHL12Q53G59 568 aa14.47□□□□□ -0.09
LMNB1-203ENST00000460265 KIAA1161Q6NSJ0 714 aa14.47□□□□□ -0.09
LMNB1-203ENST00000460265 TCTN3Q6NUS6 607 aa14.47□□□□□ -0.09
LMNB1-203ENST00000460265 VRK2Q86Y07 508 aa14.47□□□□□ -0.09
LMNB1-203ENST00000460265 OR6T1Q8NGN1 323 aa14.47□□□□□ -0.09
LMNB1-203ENST00000460265 SLC7A13Q8TCU3 470 aa14.47□□□□□ -0.09
LMNB1-203ENST00000460265 PHF21AQ96BD5 680 aa14.47□□□□□ -0.09
LMNB1-203ENST00000460265 NEURL3Q96EH8 262 aa14.47□□□□□ -0.09
LMNB1-203ENST00000460265 TOE1Q96GM8 510 aaKnown RBP14.47□□□□□ -0.09
LMNB1-203ENST00000460265 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 105.9 ms