RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 ZFP28Q8NHY6 868 aa17.2■□□□□ 0.34
COL5A1-203ENST00000460264 ZBED6CLQ96FA7 236 aaPredicted RBP17.2■□□□□ 0.34
COL5A1-203ENST00000460264 PARD6BQ9BYG5 372 aa17.2■□□□□ 0.34
COL5A1-203ENST00000460264 MCCC2Q9HCC0 563 aa17.2■□□□□ 0.34
COL5A1-203ENST00000460264 TAS2R10Q9NYW0 307 aa17.2■□□□□ 0.34
COL5A1-203ENST00000460264 SH3BP4Q9P0V3 963 aa17.2■□□□□ 0.34
COL5A1-203ENST00000460264 GIMAP2Q9UG22 337 aa17.2■□□□□ 0.34
COL5A1-203ENST00000460264 ANKHD1Q8IWZ3 2542 aaKnown RBP17.2■□□□□ 0.34
COL5A1-203ENST00000460264 CD8B2A6NJW9 211 aa17.19■□□□□ 0.34
COL5A1-203ENST00000460264 C17orf51A8MQB3 221 aa17.19■□□□□ 0.34
COL5A1-203ENST00000460264 SCO2O43819 266 aa17.19■□□□□ 0.34
COL5A1-203ENST00000460264 CPN1P15169 458 aa17.19■□□□□ 0.34
COL5A1-203ENST00000460264 GPC1P35052 558 aa17.19■□□□□ 0.34
COL5A1-203ENST00000460264 GFRA1P56159 465 aa17.19■□□□□ 0.34
COL5A1-203ENST00000460264 GAB1Q13480 694 aa17.19■□□□□ 0.34
COL5A1-203ENST00000460264 DECR1Q16698 335 aa17.19■□□□□ 0.34
COL5A1-203ENST00000460264 TRIM42Q8IWZ5 723 aa17.19■□□□□ 0.34
COL5A1-203ENST00000460264 HOXB13Q92826 284 aaPredicted RBP17.19■□□□□ 0.34
COL5A1-203ENST00000460264 DTNBP1Q96EV8 351 aa17.19■□□□□ 0.34
COL5A1-203ENST00000460264 PPP3R2Q96LZ3 170 aa17.19■□□□□ 0.34
COL5A1-203ENST00000460264 TRIB1Q96RU8 372 aa17.19■□□□□ 0.34
COL5A1-203ENST00000460264 EQTNQ9NQ60 294 aa17.19■□□□□ 0.34
COL5A1-203ENST00000460264 ACSS1Q9NUB1 689 aaPredicted RBP17.19■□□□□ 0.34
COL5A1-203ENST00000460264 FLRT3Q9NZU0 649 aa17.19■□□□□ 0.34
COL5A1-203ENST00000460264 DKKL1Q9UK85 242 aa17.19■□□□□ 0.34
COL5A1-203ENST00000460264 ABCG2Q9UNQ0 655 aa17.19■□□□□ 0.34
COL5A1-203ENST00000460264 PCNX3Q9H6A9 2034 aa17.19■□□□□ 0.34
COL5A1-203ENST00000460264 CCDC168Q8NDH2 2452 aa17.18■□□□□ 0.34
COL5A1-203ENST00000460264 MBD3L4A6NDZ8 208 aaPredicted RBP17.18■□□□□ 0.34
COL5A1-203ENST00000460264 MBD3L3A6NE82 208 aaPredicted RBP17.18■□□□□ 0.34
COL5A1-203ENST00000460264 MBD3L5A6NJ08 208 aaPredicted RBP17.18■□□□□ 0.34
COL5A1-203ENST00000460264 TTC36A6NLP5 189 aa17.18■□□□□ 0.34
COL5A1-203ENST00000460264 FADS1O60427 444 aa17.18■□□□□ 0.34
COL5A1-203ENST00000460264 IL33O95760 270 aa17.18■□□□□ 0.34
COL5A1-203ENST00000460264 BMP5P22003 454 aa17.18■□□□□ 0.34
COL5A1-203ENST00000460264 DLX5P56178 289 aa17.18■□□□□ 0.34
COL5A1-203ENST00000460264 MBD3L2Q8NHZ7 208 aaPredicted RBP17.18■□□□□ 0.34
COL5A1-203ENST00000460264 MTERF3Q96E29 417 aa17.18■□□□□ 0.34
COL5A1-203ENST00000460264 C3orf30Q96M34 536 aa17.18■□□□□ 0.34
COL5A1-203ENST00000460264 FAM120CQ9NX05 1096 aaKnown RBP17.18■□□□□ 0.34
COL5A1-203ENST00000460264 NTMQ9P121 344 aa17.18■□□□□ 0.34
COL5A1-203ENST00000460264 PPP4R1LQ9P1A2 415 aa17.18■□□□□ 0.34
COL5A1-203ENST00000460264 ZDHHC2Q9UIJ5 367 aa17.18■□□□□ 0.34
COL5A1-203ENST00000460264 MRTO4Q9UKD2 239 aaKnown RBP17.18■□□□□ 0.34
COL5A1-203ENST00000460264 MRPS18CQ9Y3D5 142 aaKnown RBP17.18■□□□□ 0.34
COL5A1-203ENST00000460264 GXYLT2A0PJZ3 443 aa17.17■□□□□ 0.34
COL5A1-203ENST00000460264 TMEM114B3SHH9 223 aa17.17■□□□□ 0.34
COL5A1-203ENST00000460264 DVL2O14641 736 aa17.17■□□□□ 0.34
COL5A1-203ENST00000460264 SCAMP2O15127 329 aaKnown RBP17.17■□□□□ 0.34
COL5A1-203ENST00000460264 PEX11AO75192 247 aa17.17■□□□□ 0.34
COL5A1-203ENST00000460264 SKAP2O75563 359 aaPredicted RBP17.17■□□□□ 0.34
COL5A1-203ENST00000460264 IL2RAP01589 272 aa17.17■□□□□ 0.34
COL5A1-203ENST00000460264 PRPS2P11908 318 aa17.17■□□□□ 0.34
COL5A1-203ENST00000460264 DPP4P27487 766 aa17.17■□□□□ 0.34
COL5A1-203ENST00000460264 MAPK1P28482 360 aa17.17■□□□□ 0.34
COL5A1-203ENST00000460264 GABRA3P34903 492 aa17.17■□□□□ 0.34
COL5A1-203ENST00000460264 HPCAL1P37235 193 aa17.17■□□□□ 0.34
COL5A1-203ENST00000460264 MAP3K8P41279 467 aa17.17■□□□□ 0.34
COL5A1-203ENST00000460264 SERPINB4P48594 390 aa17.17■□□□□ 0.34
COL5A1-203ENST00000460264 LHX2P50458 406 aa17.17■□□□□ 0.34
COL5A1-203ENST00000460264 ZNF136P52737 540 aa17.17■□□□□ 0.34
COL5A1-203ENST00000460264 MANFP55145 182 aaKnown RBP17.17■□□□□ 0.34
COL5A1-203ENST00000460264 RCAN2Q14206 197 aa17.17■□□□□ 0.34
COL5A1-203ENST00000460264 CES4AQ5XG92 561 aa17.17■□□□□ 0.34
COL5A1-203ENST00000460264 POMZP3Q6PJE2 187 aa17.17■□□□□ 0.34
COL5A1-203ENST00000460264 ENPP6Q6UWR7 440 aa17.17■□□□□ 0.34
COL5A1-203ENST00000460264 R3HCC1LQ7Z5L2 792 aaKnown RBP17.17■□□□□ 0.34
COL5A1-203ENST00000460264 FADS6Q8N9I5 356 aa17.17■□□□□ 0.34
COL5A1-203ENST00000460264 OR4K17Q8NGC6 315 aa17.17■□□□□ 0.34
COL5A1-203ENST00000460264 ZPLD1Q8TCW7 415 aa17.17■□□□□ 0.34
COL5A1-203ENST00000460264 PKNOX2Q96KN3 472 aa17.17■□□□□ 0.34
COL5A1-203ENST00000460264 SFXN2Q96NB2 322 aa17.17■□□□□ 0.34
COL5A1-203ENST00000460264 MS4A4EQ96PG1 132 aa17.17■□□□□ 0.34
COL5A1-203ENST00000460264 TUBA1CQ9BQE3 449 aa17.17■□□□□ 0.34
COL5A1-203ENST00000460264 RTN4RQ9BZR6 473 aa17.17■□□□□ 0.34
COL5A1-203ENST00000460264 CALHM2Q9HA72 323 aa17.17■□□□□ 0.34
COL5A1-203ENST00000460264 KCNN3Q9UGI6 736 aa17.17■□□□□ 0.34
COL5A1-203ENST00000460264 ATP6V1HQ9UI12 483 aa17.17■□□□□ 0.34
COL5A1-203ENST00000460264 RAB21Q9UL25 225 aa17.17■□□□□ 0.34
COL5A1-203ENST00000460264 L3MBTL1Q9Y468 752 aa17.17■□□□□ 0.34
COL5A1-203ENST00000460264 MED12LQ86YW9 2145 aa17.17■□□□□ 0.34
COL5A1-203ENST00000460264 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.16■□□□□ 0.34
COL5A1-203ENST00000460264 H0Y3Z8 333 aa17.16■□□□□ 0.34
COL5A1-203ENST00000460264 RGS16O15492 202 aaPredicted RBP17.16■□□□□ 0.34
COL5A1-203ENST00000460264 ZIC3O60481 467 aa17.16■□□□□ 0.34
COL5A1-203ENST00000460264 IGKV1D-16P01601 117 aa17.16■□□□□ 0.34
COL5A1-203ENST00000460264 EFNA1P20827 205 aaPredicted RBP17.16■□□□□ 0.34
COL5A1-203ENST00000460264 TCEA1P23193 301 aaKnown RBP17.16■□□□□ 0.34
COL5A1-203ENST00000460264 RFX3P48380 749 aa17.16■□□□□ 0.34
COL5A1-203ENST00000460264 ASCL1P50553 236 aa17.16■□□□□ 0.34
COL5A1-203ENST00000460264 PSMD4P55036 377 aaKnown RBP17.16■□□□□ 0.34
COL5A1-203ENST00000460264 STX5Q13190 355 aa17.16■□□□□ 0.34
COL5A1-203ENST00000460264 PTGR1Q14914 329 aa17.16■□□□□ 0.34
COL5A1-203ENST00000460264 ATP6AP1LQ52LC2 224 aa17.16■□□□□ 0.34
COL5A1-203ENST00000460264 C6orf136Q5SQH8 315 aa17.16■□□□□ 0.34
COL5A1-203ENST00000460264 AAGABQ6PD74 315 aa17.16■□□□□ 0.34
COL5A1-203ENST00000460264 LRIG3Q6UXM1 1119 aa17.16■□□□□ 0.34
COL5A1-203ENST00000460264 SZRD1Q7Z422 152 aa17.16■□□□□ 0.34
COL5A1-203ENST00000460264 CDRT4Q8N9R6 151 aa17.16■□□□□ 0.34
COL5A1-203ENST00000460264 NUP43Q8NFH3 380 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms