RNA–Protein interactions for RNA: ENST00000459963.5

NCSTN-209, Transcript of nicastrin, humanhuman

TSL 5

Gene NCSTN, Length 1,246 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-209ENST00000459963 DCAF12L2Q5VW00 463 aa6.94□□□□□ -1.3
NCSTN-209ENST00000459963 RAET1LQ5VY80 246 aa6.94□□□□□ -1.3
NCSTN-209ENST00000459963 FOXB2Q5VYV0 432 aa6.94□□□□□ -1.3
NCSTN-209ENST00000459963 HLA-DQA1Q5Y7H0 255 aa6.94□□□□□ -1.3
NCSTN-209ENST00000459963 CASC4Q6P4E1 433 aa6.94□□□□□ -1.3
NCSTN-209ENST00000459963 NUP54Q7Z3B4 507 aa6.94□□□□□ -1.3
NCSTN-209ENST00000459963 LRRC6Q86X45 466 aa6.94□□□□□ -1.3
NCSTN-209ENST00000459963 REXO1L1PQ8IX06 675 aa6.94□□□□□ -1.3
NCSTN-209ENST00000459963 NOA1Q8NC60 698 aaKnown RBP6.94□□□□□ -1.3
NCSTN-209ENST00000459963 FAM136AQ96C01 138 aa6.94□□□□□ -1.3
NCSTN-209ENST00000459963 LRRC45Q96CN5 670 aa6.94□□□□□ -1.3
NCSTN-209ENST00000459963 ISCUQ9H1K1 167 aa6.94□□□□□ -1.3
NCSTN-209ENST00000459963 NPHS2Q9NP85 383 aa6.94□□□□□ -1.3
NCSTN-209ENST00000459963 LIMA1Q9UHB6 759 aaKnown RBP6.94□□□□□ -1.3
NCSTN-209ENST00000459963 NUP50Q9UKX7 468 aa6.94□□□□□ -1.3
NCSTN-209ENST00000459963 MCTS1Q9ULC4 181 aaKnown RBP6.94□□□□□ -1.3
NCSTN-209ENST00000459963 PRAMEF25A6NGN4 478 aa6.93□□□□□ -1.3
NCSTN-209ENST00000459963 OR5H1A6NKK0 313 aa6.93□□□□□ -1.3
NCSTN-209ENST00000459963 ZNF814B7Z6K7 855 aa6.93□□□□□ -1.3
NCSTN-209ENST00000459963 B9A039 149 aa6.93□□□□□ -1.3
NCSTN-209ENST00000459963 LYNX1G3V0Z9 82 aa6.93□□□□□ -1.3
NCSTN-209ENST00000459963 WNT9BO14905 357 aa6.93□□□□□ -1.3
NCSTN-209ENST00000459963 ERI3O43414 337 aaKnown RBP6.93□□□□□ -1.3
NCSTN-209ENST00000459963 PLPP2O43688 288 aa6.93□□□□□ -1.3
NCSTN-209ENST00000459963 MPZL1O95297 269 aa6.93□□□□□ -1.3
NCSTN-209ENST00000459963 PGM3O95394 542 aa6.93□□□□□ -1.3
NCSTN-209ENST00000459963 LYNX1P0DP58 116 aa6.93□□□□□ -1.3
NCSTN-209ENST00000459963 ZNF17P17021 662 aa6.93□□□□□ -1.3
NCSTN-209ENST00000459963 GGT1P19440 569 aa6.93□□□□□ -1.3
NCSTN-209ENST00000459963 RAB6AP20340 208 aa6.93□□□□□ -1.3
NCSTN-209ENST00000459963 CCND1P24385 295 aa6.93□□□□□ -1.3
NCSTN-209ENST00000459963 CTNNA2P26232 953 aa6.93□□□□□ -1.3
NCSTN-209ENST00000459963 CNTFP26441 200 aa6.93□□□□□ -1.3
NCSTN-209ENST00000459963 RPL22P35268 128 aaKnown RBP6.93□□□□□ -1.3
NCSTN-209ENST00000459963 SERPINF1P36955 418 aa6.93□□□□□ -1.3
NCSTN-209ENST00000459963 GPR6P46095 362 aaPredicted RBP6.93□□□□□ -1.3
NCSTN-209ENST00000459963 NPY2RP49146 381 aa6.93□□□□□ -1.3
NCSTN-209ENST00000459963 GP2P55259 537 aaKnown RBP6.93□□□□□ -1.3
NCSTN-209ENST00000459963 DSCR4P56555 118 aaPredicted RBP6.93□□□□□ -1.3
NCSTN-209ENST00000459963 PROK1P58294 105 aa6.93□□□□□ -1.3
NCSTN-209ENST00000459963 LMO4P61968 165 aa6.93□□□□□ -1.3
NCSTN-209ENST00000459963 IGLV3-21P80748 117 aaPredicted RBP6.93□□□□□ -1.3
NCSTN-209ENST00000459963 HMGCS1Q01581 520 aa6.93□□□□□ -1.3
NCSTN-209ENST00000459963 TNFRSF17Q02223 184 aa6.93□□□□□ -1.3
NCSTN-209ENST00000459963 ZNF267Q14586 743 aaPredicted RBP6.93□□□□□ -1.3
NCSTN-209ENST00000459963 CPSF6Q16630 551 aaKnown RBP eCLIP6.93□□□□□ -1.3
NCSTN-209ENST00000459963 SPRED3Q2MJR0 410 aa6.93□□□□□ -1.3
NCSTN-209ENST00000459963 OR5M10Q6IEU7 315 aa6.93□□□□□ -1.3
NCSTN-209ENST00000459963 ACSM5Q6NUN0 579 aa6.93□□□□□ -1.3
NCSTN-209ENST00000459963 Q6ZT83 130 aa6.93□□□□□ -1.3
NCSTN-209ENST00000459963 NUFIP2Q7Z417 695 aaKnown RBP6.93□□□□□ -1.3
NCSTN-209ENST00000459963 TRIM58Q8NG06 486 aa6.93□□□□□ -1.3
NCSTN-209ENST00000459963 NEK11Q8NG66 645 aa6.93□□□□□ -1.3
NCSTN-209ENST00000459963 OR52B6Q8NGF0 335 aa6.93□□□□□ -1.3
NCSTN-209ENST00000459963 QKIQ96PU8 341 aaKnown RBP eCLIP6.93□□□□□ -1.3
NCSTN-209ENST00000459963 SLC30A2Q9BRI3 323 aa6.93□□□□□ -1.3
NCSTN-209ENST00000459963 HAUS8Q9BT25 410 aa6.93□□□□□ -1.3
NCSTN-209ENST00000459963 DDX47Q9H0S4 455 aaKnown RBP6.93□□□□□ -1.3
NCSTN-209ENST00000459963 PIH1D1Q9NWS0 290 aaKnown RBP6.93□□□□□ -1.3
NCSTN-209ENST00000459963 TAB2Q9NYJ8 693 aa6.93□□□□□ -1.3
NCSTN-209ENST00000459963 PLEK2Q9NYT0 353 aa6.93□□□□□ -1.3
NCSTN-209ENST00000459963 SLC2A6Q9UGQ3 507 aa6.93□□□□□ -1.3
NCSTN-209ENST00000459963 MCM8Q9UJA3 840 aa6.93□□□□□ -1.3
NCSTN-209ENST00000459963 ANAPC5Q9UJX4 755 aa6.93□□□□□ -1.3
NCSTN-209ENST00000459963 MYO6Q9UM54 1294 aa6.93□□□□□ -1.3
NCSTN-209ENST00000459963 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.93□□□□□ -1.3
NCSTN-209ENST00000459963 TSC22D4Q9Y3Q8 395 aa6.93□□□□□ -1.3
NCSTN-209ENST00000459963 KIAA1109Q2LD37 5005 aa6.92□□□□□ -1.3
NCSTN-209ENST00000459963 B4DXG7 233 aa6.92□□□□□ -1.3
NCSTN-209ENST00000459963 FGF17O60258 216 aa6.92□□□□□ -1.3
NCSTN-209ENST00000459963 NIPSNAP2O75323 286 aa6.92□□□□□ -1.3
NCSTN-209ENST00000459963 ERLIN1O75477 346 aa6.92□□□□□ -1.3
NCSTN-209ENST00000459963 PROSCO94903 275 aa6.92□□□□□ -1.3
NCSTN-209ENST00000459963 KRT1P04264 644 aa6.92□□□□□ -1.3
NCSTN-209ENST00000459963 NAGAP17050 411 aa6.92□□□□□ -1.3
NCSTN-209ENST00000459963 HK1P19367 917 aa6.92□□□□□ -1.3
NCSTN-209ENST00000459963 GATA3P23771 443 aa6.92□□□□□ -1.3
NCSTN-209ENST00000459963 EEF1GP26641 437 aaKnown RBP6.92□□□□□ -1.3
NCSTN-209ENST00000459963 CERS1P27544 350 aa6.92□□□□□ -1.3
NCSTN-209ENST00000459963 HNRNPH1P31943 449 aaKnown RBP6.92□□□□□ -1.3
NCSTN-209ENST00000459963 PLIN5Q00G26 463 aa6.92□□□□□ -1.3
NCSTN-209ENST00000459963 IL1RL1Q01638 556 aa6.92□□□□□ -1.3
NCSTN-209ENST00000459963 SLAMF1Q13291 335 aa6.92□□□□□ -1.3
NCSTN-209ENST00000459963 NAE1Q13564 534 aa6.92□□□□□ -1.3
NCSTN-209ENST00000459963 TMEM201Q5SNT2 666 aa6.92□□□□□ -1.3
NCSTN-209ENST00000459963 GTF2IRD2BQ6EKJ0 949 aa6.92□□□□□ -1.3
NCSTN-209ENST00000459963 AGTRAPQ6RW13 159 aa6.92□□□□□ -1.3
NCSTN-209ENST00000459963 CES3Q6UWW8 571 aa6.92□□□□□ -1.3
NCSTN-209ENST00000459963 SPATA19Q7Z5L4 167 aa6.92□□□□□ -1.3
NCSTN-209ENST00000459963 GALNT10Q86SR1 603 aa6.92□□□□□ -1.3
NCSTN-209ENST00000459963 GTF2IRD2Q86UP8 949 aa6.92□□□□□ -1.3
NCSTN-209ENST00000459963 GGNQ86UU5 652 aa6.92□□□□□ -1.3
NCSTN-209ENST00000459963 CARM1Q86X55 608 aa6.92□□□□□ -1.3
NCSTN-209ENST00000459963 KLHDC8AQ8IYD2 350 aa6.92□□□□□ -1.3
NCSTN-209ENST00000459963 GBP7Q8N8V2 638 aaPredicted RBP6.92□□□□□ -1.3
NCSTN-209ENST00000459963 BBOF1Q8ND07 529 aa6.92□□□□□ -1.3
NCSTN-209ENST00000459963 OR5M1Q8NGP8 315 aa6.92□□□□□ -1.3
NCSTN-209ENST00000459963 OR52N5Q8NH56 324 aa6.92□□□□□ -1.3
NCSTN-209ENST00000459963 FAM110BQ8TC76 370 aa6.92□□□□□ -1.3
NCSTN-209ENST00000459963 FBLIM1Q8WUP2 373 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms