RNA–Protein interactions for RNA: ENST00000459902.1

CKAP2-204, Transcript of cytoskeleton associated protein 2, humanhuman

TSL 2

Gene CKAP2, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-204ENST00000459902 TM2D1Q9BX74 207 aa4.49□□□□□ -1.69
CKAP2-204ENST00000459902 ELOVL2Q9NXB9 296 aa4.49□□□□□ -1.69
CKAP2-204ENST00000459902 RNF103-CHMP3A0A140T963 221 aa4.48□□□□□ -1.69
CKAP2-204ENST00000459902 H3BTX0 84 aa4.48□□□□□ -1.69
CKAP2-204ENST00000459902 NOL4O94818 638 aa4.48□□□□□ -1.69
CKAP2-204ENST00000459902 H2AFZP0C0S5 128 aa4.48□□□□□ -1.69
CKAP2-204ENST00000459902 IGHV1-2P23083 117 aa4.48□□□□□ -1.69
CKAP2-204ENST00000459902 PRKAR2BP31323 418 aa4.48□□□□□ -1.69
CKAP2-204ENST00000459902 RABIFP47224 123 aa4.48□□□□□ -1.69
CKAP2-204ENST00000459902 HTR5AP47898 357 aa4.48□□□□□ -1.69
CKAP2-204ENST00000459902 KIAA0040Q15053 153 aa4.48□□□□□ -1.69
CKAP2-204ENST00000459902 MEDAGQ5VYS4 303 aa4.48□□□□□ -1.69
CKAP2-204ENST00000459902 PARGQ86W56 976 aa4.48□□□□□ -1.69
CKAP2-204ENST00000459902 GPR65Q8IYL9 337 aa4.48□□□□□ -1.69
CKAP2-204ENST00000459902 UBQLNLQ8IYU4 475 aa4.48□□□□□ -1.69
CKAP2-204ENST00000459902 NFAM1Q8NET5 270 aaPredicted RBP4.48□□□□□ -1.69
CKAP2-204ENST00000459902 TRPV5Q9NQA5 729 aa4.48□□□□□ -1.69
CKAP2-204ENST00000459902 DUSP12Q9UNI6 340 aa4.48□□□□□ -1.69
CKAP2-204ENST00000459902 GPRASP1Q5JY77 1395 aa4.48□□□□□ -1.69
CKAP2-204ENST00000459902 USP6P35125 1406 aa4.47□□□□□ -1.69
CKAP2-204ENST00000459902 LGALS8O00214 317 aa4.47□□□□□ -1.69
CKAP2-204ENST00000459902 TM9SF1O15321 606 aa4.47□□□□□ -1.69
CKAP2-204ENST00000459902 PTMAP06454 111 aaKnown RBP4.47□□□□□ -1.69
CKAP2-204ENST00000459902 IGFBP1P08833 259 aaPredicted RBP4.47□□□□□ -1.69
CKAP2-204ENST00000459902 KARSQ15046 597 aaKnown RBP4.47□□□□□ -1.69
CKAP2-204ENST00000459902 UBE2V2Q15819 145 aa4.47□□□□□ -1.69
CKAP2-204ENST00000459902 GLYR1Q49A26 553 aaPredicted RBP4.47□□□□□ -1.69
CKAP2-204ENST00000459902 CYBRD1Q53TN4 286 aa4.47□□□□□ -1.69
CKAP2-204ENST00000459902 LDLRAP1Q5SW96 308 aa4.47□□□□□ -1.69
CKAP2-204ENST00000459902 ZNF57Q68EA5 555 aaPredicted RBP4.47□□□□□ -1.69
CKAP2-204ENST00000459902 SLC39A4Q6P5W5 647 aa4.47□□□□□ -1.69
CKAP2-204ENST00000459902 Q7L0L9 218 aa4.47□□□□□ -1.69
CKAP2-204ENST00000459902 FBXO16Q8IX29 292 aaPredicted RBP4.47□□□□□ -1.69
CKAP2-204ENST00000459902 ZNF619Q8N2I2 560 aa4.47□□□□□ -1.69
CKAP2-204ENST00000459902 ADAMTS16Q8TE57 1224 aa4.47□□□□□ -1.69
CKAP2-204ENST00000459902 FCGR1BQ92637 280 aa4.47□□□□□ -1.69
CKAP2-204ENST00000459902 MCHR2Q969V1 340 aa4.47□□□□□ -1.69
CKAP2-204ENST00000459902 TADA1Q96BN2 335 aa4.47□□□□□ -1.69
CKAP2-204ENST00000459902 FAF2Q96CS3 445 aa4.47□□□□□ -1.69
CKAP2-204ENST00000459902 MRPL38Q96DV4 380 aaKnown RBP4.47□□□□□ -1.69
CKAP2-204ENST00000459902 KAT8Q9H7Z6 458 aaKnown RBP4.47□□□□□ -1.69
CKAP2-204ENST00000459902 SOHLH2Q9NX45 425 aa4.47□□□□□ -1.69
CKAP2-204ENST00000459902 RNF222A6NCQ9 220 aa4.46□□□□□ -1.7
CKAP2-204ENST00000459902 E7ENQ6 273 aa4.46□□□□□ -1.7
CKAP2-204ENST00000459902 TNFSF11O14788 317 aa4.46□□□□□ -1.7
CKAP2-204ENST00000459902 PPIHO43447 177 aaKnown RBP4.46□□□□□ -1.7
CKAP2-204ENST00000459902 RAMP1O60894 148 aa4.46□□□□□ -1.7
CKAP2-204ENST00000459902 ZNF19P17023 458 aa4.46□□□□□ -1.7
CKAP2-204ENST00000459902 GAP43P17677 238 aa4.46□□□□□ -1.7
CKAP2-204ENST00000459902 RPA1P27694 616 aa4.46□□□□□ -1.7
CKAP2-204ENST00000459902 PRKCEQ02156 737 aa4.46□□□□□ -1.7
CKAP2-204ENST00000459902 SPP2Q13103 211 aa4.46□□□□□ -1.7
CKAP2-204ENST00000459902 C9orf129Q5T035 196 aaKnown RBP4.46□□□□□ -1.7
CKAP2-204ENST00000459902 SLX4IPQ5VYV7 408 aa4.46□□□□□ -1.7
CKAP2-204ENST00000459902 FAM43BQ6ZT52 329 aaPredicted RBP4.46□□□□□ -1.7
CKAP2-204ENST00000459902 APOBEC3FQ8IUX4 373 aaKnown RBP4.46□□□□□ -1.7
CKAP2-204ENST00000459902 C9orf40Q8IXQ3 194 aa4.46□□□□□ -1.7
CKAP2-204ENST00000459902 MCOLN2Q8IZK6 566 aa4.46□□□□□ -1.7
CKAP2-204ENST00000459902 HDDC3Q8N4P3 179 aa4.46□□□□□ -1.7
CKAP2-204ENST00000459902 OR8H1Q8NGG4 311 aa4.46□□□□□ -1.7
CKAP2-204ENST00000459902 OR13F1Q8NGS4 319 aa4.46□□□□□ -1.7
CKAP2-204ENST00000459902 C14orf79Q96F83 325 aa4.46□□□□□ -1.7
CKAP2-204ENST00000459902 FAM111AQ96PZ2 611 aa4.46□□□□□ -1.7
CKAP2-204ENST00000459902 DPH7Q9BTV6 452 aa4.46□□□□□ -1.7
CKAP2-204ENST00000459902 HSD3B7Q9H2F3 369 aa4.46□□□□□ -1.7
CKAP2-204ENST00000459902 ABCC4O15439 1325 aa4.46□□□□□ -1.7
CKAP2-204ENST00000459902 CUX2O14529 1486 aa4.45□□□□□ -1.7
CKAP2-204ENST00000459902 IGLV8-61A0A075B6I0 122 aa4.45□□□□□ -1.7
CKAP2-204ENST00000459902 KRT87PA6NCN2 255 aa4.45□□□□□ -1.7
CKAP2-204ENST00000459902 LATO43561 262 aa4.45□□□□□ -1.7
CKAP2-204ENST00000459902 JCHAINP01591 159 aa4.45□□□□□ -1.7
CKAP2-204ENST00000459902 DUX4L4P0CJ87 422 aa4.45□□□□□ -1.7
CKAP2-204ENST00000459902 FUT1P19526 365 aa4.45□□□□□ -1.7
CKAP2-204ENST00000459902 ZBTB25P24278 435 aa4.45□□□□□ -1.7
CKAP2-204ENST00000459902 PTBP1P26599 531 aaKnown RBP eCLIP4.45□□□□□ -1.7
CKAP2-204ENST00000459902 CDH5P33151 784 aaPredicted RBP4.45□□□□□ -1.7
CKAP2-204ENST00000459902 LYZP61626 148 aa4.45□□□□□ -1.7
CKAP2-204ENST00000459902 TFDP1Q14186 410 aa4.45□□□□□ -1.7
CKAP2-204ENST00000459902 CYP51A1Q16850 503 aa4.45□□□□□ -1.7
CKAP2-204ENST00000459902 ZNF677Q86XU0 584 aa4.45□□□□□ -1.7
CKAP2-204ENST00000459902 MAPKAP1Q9BPZ7 522 aa4.45□□□□□ -1.7
CKAP2-204ENST00000459902 RAB17Q9H0T7 212 aa4.45□□□□□ -1.7
CKAP2-204ENST00000459902 RPAP3Q9H6T3 665 aaPredicted RBP4.45□□□□□ -1.7
CKAP2-204ENST00000459902 ROPN1Q9HAT0 212 aaPredicted RBP4.45□□□□□ -1.7
CKAP2-204ENST00000459902 KLHL21Q9UJP4 597 aa4.45□□□□□ -1.7
CKAP2-204ENST00000459902 PIN4Q9Y237 131 aaKnown RBP4.45□□□□□ -1.7
CKAP2-204ENST00000459902 PDXKO00764 312 aa4.44□□□□□ -1.7
CKAP2-204ENST00000459902 CDX4O14627 284 aaPredicted RBP4.44□□□□□ -1.7
CKAP2-204ENST00000459902 PTBP3O95758 552 aaKnown RBP4.44□□□□□ -1.7
CKAP2-204ENST00000459902 ANXA4P09525 319 aaPredicted RBP4.44□□□□□ -1.7
CKAP2-204ENST00000459902 GSTT2P0CG29 244 aa4.44□□□□□ -1.7
CKAP2-204ENST00000459902 GSTT2BP0CG30 244 aa4.44□□□□□ -1.7
CKAP2-204ENST00000459902 RFTN1Q14699 578 aaPredicted RBP4.44□□□□□ -1.7
CKAP2-204ENST00000459902 ISXQ2M1V0 245 aa4.44□□□□□ -1.7
CKAP2-204ENST00000459902 LCE3EQ5T5B0 92 aa4.44□□□□□ -1.7
CKAP2-204ENST00000459902 UFSP1Q6NVU6 142 aa4.44□□□□□ -1.7
CKAP2-204ENST00000459902 RBM43Q6ZSC3 357 aaKnown RBP4.44□□□□□ -1.7
CKAP2-204ENST00000459902 LPCAT2Q7L5N7 544 aa4.44□□□□□ -1.7
CKAP2-204ENST00000459902 CSNK1A1LQ8N752 337 aa4.44□□□□□ -1.7
CKAP2-204ENST00000459902 KIR2DL4Q99706 377 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms