RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 RNF141Q8WVD5 230 aa9.26□□□□□ -0.93
UFD1-205ENST00000459854 TMEM121BQ9BXQ6 578 aaPredicted RBP9.26□□□□□ -0.93
UFD1-205ENST00000459854 COQ3Q9NZJ6 369 aa9.26□□□□□ -0.93
UFD1-205ENST00000459854 ZNF225Q9UK10 706 aa9.26□□□□□ -0.93
UFD1-205ENST00000459854 C20orf202A1L168 122 aa9.25□□□□□ -0.93
UFD1-205ENST00000459854 EEF1E1-BLOC1S5C9J1V9 151 aa9.25□□□□□ -0.93
UFD1-205ENST00000459854 DIRAS1O95057 198 aa9.25□□□□□ -0.93
UFD1-205ENST00000459854 ZNF30P17039 623 aa9.25□□□□□ -0.93
UFD1-205ENST00000459854 KCNQ1P51787 676 aa9.25□□□□□ -0.93
UFD1-205ENST00000459854 CCINQ13939 588 aa9.25□□□□□ -0.93
UFD1-205ENST00000459854 NIPAL3Q6P499 406 aa9.25□□□□□ -0.93
UFD1-205ENST00000459854 NRROSQ86YC3 692 aa9.25□□□□□ -0.93
UFD1-205ENST00000459854 KLBQ86Z14 1044 aa9.25□□□□□ -0.93
UFD1-205ENST00000459854 GPR135Q8IZ08 494 aa9.25□□□□□ -0.93
UFD1-205ENST00000459854 ZNF454Q8N9F8 522 aa9.25□□□□□ -0.93
UFD1-205ENST00000459854 VN1R2Q8NFZ6 395 aa9.25□□□□□ -0.93
UFD1-205ENST00000459854 SMPDL3AQ92484 453 aa9.25□□□□□ -0.93
UFD1-205ENST00000459854 CDK15Q96Q40 435 aa9.25□□□□□ -0.93
UFD1-205ENST00000459854 SLC6A7Q99884 636 aa9.25□□□□□ -0.93
UFD1-205ENST00000459854 SOX17Q9H6I2 414 aaPredicted RBP9.25□□□□□ -0.93
UFD1-205ENST00000459854 ZBTB20Q9HC78 741 aaPredicted RBP9.25□□□□□ -0.93
UFD1-205ENST00000459854 RANGRFQ9HD47 186 aaPredicted RBP9.25□□□□□ -0.93
UFD1-205ENST00000459854 MRPS30Q9NP92 439 aaKnown RBP9.25□□□□□ -0.93
UFD1-205ENST00000459854 GPRC5BQ9NZH0 403 aa9.25□□□□□ -0.93
UFD1-205ENST00000459854 POLHQ9Y253 713 aa9.25□□□□□ -0.93
UFD1-205ENST00000459854 NPIPA5E9PKD4 350 aa9.25□□□□□ -0.93
UFD1-205ENST00000459854 TEAD2Q15562 447 aa9.25□□□□□ -0.93
UFD1-205ENST00000459854 ZNF440Q8IYI8 595 aa9.25□□□□□ -0.93
UFD1-205ENST00000459854 TMEM130Q8N3G9 435 aa9.25□□□□□ -0.93
UFD1-205ENST00000459854 CLIP3Q96DZ5 547 aa9.25□□□□□ -0.93
UFD1-205ENST00000459854 SLC29A1Q99808 456 aa9.25□□□□□ -0.93
UFD1-205ENST00000459854 CCM2Q9BSQ5 444 aa9.25□□□□□ -0.93
UFD1-205ENST00000459854 DHRS4Q9BTZ2 278 aa9.25□□□□□ -0.93
UFD1-205ENST00000459854 CNTNAP3Q9BZ76 1288 aa9.25□□□□□ -0.93
UFD1-205ENST00000459854 SLC25A31Q9H0C2 315 aa9.25□□□□□ -0.93
UFD1-205ENST00000459854 TSPAN10Q9H1Z9 355 aaPredicted RBP9.25□□□□□ -0.93
UFD1-205ENST00000459854 Q9N2J8 555 aa9.25□□□□□ -0.93
UFD1-205ENST00000459854 TDP1Q9NUW8 608 aa9.25□□□□□ -0.93
UFD1-205ENST00000459854 EVLQ9UI08 416 aaPredicted RBP9.25□□□□□ -0.93
UFD1-205ENST00000459854 NPIPA1Q9UND3 350 aa9.25□□□□□ -0.93
UFD1-205ENST00000459854 MRPS17Q9Y2R5 130 aaKnown RBP9.25□□□□□ -0.93
UFD1-205ENST00000459854 YJEFN3A6XGL0 299 aa9.25□□□□□ -0.93
UFD1-205ENST00000459854 A8MVJ9 347 aa9.25□□□□□ -0.93
UFD1-205ENST00000459854 PSMD9O00233 223 aa9.25□□□□□ -0.93
UFD1-205ENST00000459854 GAPDHSO14556 408 aaPredicted RBP9.25□□□□□ -0.93
UFD1-205ENST00000459854 PPP1R2P9O14990 202 aa9.25□□□□□ -0.93
UFD1-205ENST00000459854 GNRHRP30968 328 aa9.25□□□□□ -0.93
UFD1-205ENST00000459854 DIO3P55073 304 aa9.25□□□□□ -0.93
UFD1-205ENST00000459854 PPP1R8Q12972 351 aaKnown RBP9.25□□□□□ -0.93
UFD1-205ENST00000459854 SERINC3Q13530 473 aa9.25□□□□□ -0.93
UFD1-205ENST00000459854 SPCS2Q15005 226 aa9.25□□□□□ -0.93
UFD1-205ENST00000459854 ZER1Q7Z7L7 766 aa9.25□□□□□ -0.93
UFD1-205ENST00000459854 FOXRED1Q96CU9 486 aaPredicted RBP9.25□□□□□ -0.93
UFD1-205ENST00000459854 TRMT2BQ96GJ1 504 aaKnown RBP9.25□□□□□ -0.93
UFD1-205ENST00000459854 FEVQ99581 238 aa9.25□□□□□ -0.93
UFD1-205ENST00000459854 SLC2A11Q9BYW1 496 aa9.25□□□□□ -0.93
UFD1-205ENST00000459854 GSX2Q9BZM3 304 aa9.25□□□□□ -0.93
UFD1-205ENST00000459854 WDR26Q9H7D7 661 aa9.25□□□□□ -0.93
UFD1-205ENST00000459854 GDE1Q9NZC3 331 aa9.25□□□□□ -0.93
UFD1-205ENST00000459854 RPS10-NUDT3A0A1W2PQS6 291 aa9.25□□□□□ -0.93
UFD1-205ENST00000459854 TTC24A2A3L6 582 aaPredicted RBP9.25□□□□□ -0.93
UFD1-205ENST00000459854 CD8B2A6NJW9 211 aa9.25□□□□□ -0.93
UFD1-205ENST00000459854 NIPSNAP2O75323 286 aa9.25□□□□□ -0.93
UFD1-205ENST00000459854 BEST1O76090 585 aa9.25□□□□□ -0.93
UFD1-205ENST00000459854 LCKP06239 509 aa9.25□□□□□ -0.93
UFD1-205ENST00000459854 CD8BP10966 210 aa9.25□□□□□ -0.93
UFD1-205ENST00000459854 HRH2P25021 359 aa9.25□□□□□ -0.93
UFD1-205ENST00000459854 MAOBP27338 520 aa9.25□□□□□ -0.93
UFD1-205ENST00000459854 WEE1P30291 646 aa9.25□□□□□ -0.93
UFD1-205ENST00000459854 GKP32189 559 aa9.25□□□□□ -0.93
UFD1-205ENST00000459854 RPS10P46783 165 aaKnown RBP9.25□□□□□ -0.93
UFD1-205ENST00000459854 PTH2RP49190 550 aa9.25□□□□□ -0.93
UFD1-205ENST00000459854 PIWIL3Q7Z3Z3 882 aaKnown RBP9.25□□□□□ -0.93
UFD1-205ENST00000459854 GPR149Q86SP6 731 aa9.25□□□□□ -0.93
UFD1-205ENST00000459854 TMEM200AQ86VY9 491 aa9.25□□□□□ -0.93
UFD1-205ENST00000459854 MCEMP1Q8IX19 187 aa9.25□□□□□ -0.93
UFD1-205ENST00000459854 ZFAND1Q8TCF1 268 aa9.25□□□□□ -0.93
UFD1-205ENST00000459854 HCAR2Q8TDS4 363 aa9.25□□□□□ -0.93
UFD1-205ENST00000459854 TMEM125Q96AQ2 219 aa9.25□□□□□ -0.93
UFD1-205ENST00000459854 RBP7Q96R05 134 aa9.25□□□□□ -0.93
UFD1-205ENST00000459854 DUS2Q9NX74 493 aaKnown RBP9.25□□□□□ -0.93
UFD1-205ENST00000459854 NDRG3Q9UGV2 375 aa9.25□□□□□ -0.93
UFD1-205ENST00000459854 UTS2RQ9UKP6 389 aa9.25□□□□□ -0.93
UFD1-205ENST00000459854 CEP290O15078 2479 aa9.25□□□□□ -0.93
UFD1-205ENST00000459854 NEDD8-MDP1E9PL57 170 aa9.24□□□□□ -0.93
UFD1-205ENST00000459854 HCRTR2O43614 444 aa9.24□□□□□ -0.93
UFD1-205ENST00000459854 SCAF4O95104 1147 aaKnown RBP9.24□□□□□ -0.93
UFD1-205ENST00000459854 C6orf47O95873 294 aa9.24□□□□□ -0.93
UFD1-205ENST00000459854 BMP4P12644 408 aa9.24□□□□□ -0.93
UFD1-205ENST00000459854 BPIP17213 487 aa9.24□□□□□ -0.93
UFD1-205ENST00000459854 AHCYP23526 432 aa9.24□□□□□ -0.93
UFD1-205ENST00000459854 CORO1AP31146 461 aaKnown RBP9.24□□□□□ -0.93
UFD1-205ENST00000459854 PDGFRLQ15198 375 aa9.24□□□□□ -0.93
UFD1-205ENST00000459854 BATFQ16520 125 aa9.24□□□□□ -0.93
UFD1-205ENST00000459854 LPCAT3Q6P1A2 487 aa9.24□□□□□ -0.93
UFD1-205ENST00000459854 TMEM220Q6QAJ8 160 aa9.24□□□□□ -0.93
UFD1-205ENST00000459854 FAM83HQ6ZRV2 1179 aaPredicted RBP9.24□□□□□ -0.93
UFD1-205ENST00000459854 TMEM150AQ86TG1 271 aa9.24□□□□□ -0.93
UFD1-205ENST00000459854 SERPINA11Q86U17 422 aa9.24□□□□□ -0.93
UFD1-205ENST00000459854 MRPL41Q8IXM3 137 aaKnown RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms